RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 CASC1Q6TDU7 716 aa8.23□□□□□ -1.09
LDB3-206ENST00000477489 LRP10Q7Z4F1 713 aa8.23□□□□□ -1.09
LDB3-206ENST00000477489 PLEKHM2Q8IWE5 1019 aa8.23□□□□□ -1.09
LDB3-206ENST00000477489 PLBD2Q8NHP8 589 aa8.23□□□□□ -1.09
LDB3-206ENST00000477489 NECTIN2Q92692 538 aa8.23□□□□□ -1.09
LDB3-206ENST00000477489 BCL2L12Q9HB09 334 aa8.23□□□□□ -1.09
LDB3-206ENST00000477489 TMOD3Q9NYL9 352 aa8.23□□□□□ -1.09
LDB3-206ENST00000477489 C9orf78Q9NZ63 289 aaPredicted RBP8.23□□□□□ -1.09
LDB3-206ENST00000477489 MAP3K2Q9Y2U5 619 aa8.23□□□□□ -1.09
LDB3-206ENST00000477489 NOP58Q9Y2X3 529 aaKnown RBP8.23□□□□□ -1.09
LDB3-206ENST00000477489 AFDNP55196 1824 aaKnown RBP8.23□□□□□ -1.09
LDB3-206ENST00000477489 TUBGCP6Q96RT7 1819 aa8.23□□□□□ -1.09
LDB3-206ENST00000477489 SPATA31A1Q5TZJ5 1347 aa8.23□□□□□ -1.09
LDB3-206ENST00000477489 BCL9O00512 1426 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 GRM8O00222 908 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 CDC45O75419 566 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 SLC39A6Q13433 755 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 CAMK2BQ13554 666 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 BECN1Q14457 450 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 TTC22Q5TAA0 569 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 ERICH6Q7L0X2 663 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 RIC3Q7Z5B4 369 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 SKAP1Q86WV1 359 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 GJD4Q96KN9 370 aaPredicted RBP8.22□□□□□ -1.09
LDB3-206ENST00000477489 TBC1D32Q96NH3 1257 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 STAP2Q9UGK3 403 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 LRRFIP2Q9Y608 721 aaKnown RBP8.22□□□□□ -1.09
LDB3-206ENST00000477489 SPATA31A5Q5VU36 1347 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 SPATA31A7Q8IWB4 1347 aa8.22□□□□□ -1.09
LDB3-206ENST00000477489 HRO43593 1189 aa8.21□□□□□ -1.1
LDB3-206ENST00000477489 STARD3NLO95772 234 aa8.21□□□□□ -1.1
LDB3-206ENST00000477489 R3HDM1Q15032 1099 aaKnown RBP8.21□□□□□ -1.1
LDB3-206ENST00000477489 DDX54Q8TDD1 881 aaKnown RBP8.21□□□□□ -1.1
LDB3-206ENST00000477489 KIF1BPQ96EK5 621 aa8.21□□□□□ -1.1
LDB3-206ENST00000477489 SALL3Q9BXA9 1300 aa8.21□□□□□ -1.1
LDB3-206ENST00000477489 DOT1LQ8TEK3 1739 aa8.2□□□□□ -1.1
LDB3-206ENST00000477489 NEURL1BA8MQ27 555 aa8.2□□□□□ -1.1
LDB3-206ENST00000477489 SRGAP3O43295 1099 aa8.2□□□□□ -1.1
LDB3-206ENST00000477489 RBM25P49756 843 aaKnown RBP8.2□□□□□ -1.1
LDB3-206ENST00000477489 TRIM28Q13263 835 aaKnown RBP8.2□□□□□ -1.1
LDB3-206ENST00000477489 GCKRQ14397 625 aa8.2□□□□□ -1.1
LDB3-206ENST00000477489 PROSER3Q2NL68 480 aa8.2□□□□□ -1.1
LDB3-206ENST00000477489 COPS6Q7L5N1 327 aa8.2□□□□□ -1.1
LDB3-206ENST00000477489 PPP1R42Q7Z4L9 355 aa8.2□□□□□ -1.1
LDB3-206ENST00000477489 TICAM2Q86XR7 235 aa8.2□□□□□ -1.1
LDB3-206ENST00000477489 XAGE3Q8WTP9 111 aa8.2□□□□□ -1.1
LDB3-206ENST00000477489 DAXXQ9UER7 740 aaPredicted RBP8.2□□□□□ -1.1
LDB3-206ENST00000477489 USP16Q9Y5T5 823 aa8.2□□□□□ -1.1
LDB3-206ENST00000477489 TTC41PQ6P2S7 1318 aa8.2□□□□□ -1.1
LDB3-206ENST00000477489 USP42Q9H9J4 1324 aaKnown RBP8.2□□□□□ -1.1
LDB3-206ENST00000477489 RREB1Q92766 1687 aa8.2□□□□□ -1.1
LDB3-206ENST00000477489 PNMA6EA0A0J9YXQ4 647 aa8.19□□□□□ -1.1
LDB3-206ENST00000477489 PRAMEF22A3QJZ6 481 aa8.19□□□□□ -1.1
LDB3-206ENST00000477489 NBPF7P0C2Y1 421 aaPredicted RBP8.19□□□□□ -1.1
LDB3-206ENST00000477489 MX1P20591 662 aa8.19□□□□□ -1.1
LDB3-206ENST00000477489 PTPREP23469 700 aa8.19□□□□□ -1.1
LDB3-206ENST00000477489 BAG6P46379 1132 aa8.19□□□□□ -1.1
LDB3-206ENST00000477489 PDE1AP54750 535 aa8.19□□□□□ -1.1
LDB3-206ENST00000477489 HSP90AB3PQ58FF7 597 aa8.19□□□□□ -1.1
LDB3-206ENST00000477489 PAXIP1Q6ZW49 1069 aaPredicted RBP8.19□□□□□ -1.1
LDB3-206ENST00000477489 UNC5CLQ8IV45 518 aa8.19□□□□□ -1.1
LDB3-206ENST00000477489 CCDC191Q8NCU4 936 aa8.19□□□□□ -1.1
LDB3-206ENST00000477489 ZDHHC16Q969W1 377 aa8.19□□□□□ -1.1
LDB3-206ENST00000477489 ANKRD36CQ5JPF3 1778 aa8.19□□□□□ -1.1
LDB3-206ENST00000477489 TJP1Q07157 1748 aa8.18□□□□□ -1.1
LDB3-206ENST00000477489 REC8O95072 547 aa8.18□□□□□ -1.1
LDB3-206ENST00000477489 IGKV5-2P06315 115 aa8.18□□□□□ -1.1
LDB3-206ENST00000477489 C1QTNF8P60827 252 aa8.18□□□□□ -1.1
LDB3-206ENST00000477489 VPS72Q15906 364 aa8.18□□□□□ -1.1
LDB3-206ENST00000477489 DDB1Q16531 1140 aa8.18□□□□□ -1.1
LDB3-206ENST00000477489 RABL6Q3YEC7 729 aaPredicted RBP8.18□□□□□ -1.1
LDB3-206ENST00000477489 NPM2Q86SE8 214 aaKnown RBP8.18□□□□□ -1.1
LDB3-206ENST00000477489 ZNF784Q8NCA9 323 aaPredicted RBP8.18□□□□□ -1.1
LDB3-206ENST00000477489 RHPN1Q8TCX5 695 aa8.18□□□□□ -1.1
LDB3-206ENST00000477489 PIGBQ92521 554 aa8.18□□□□□ -1.1
LDB3-206ENST00000477489 SMARCC1Q92922 1105 aaPredicted RBP8.18□□□□□ -1.1
LDB3-206ENST00000477489 GPATCH3Q96I76 525 aa8.18□□□□□ -1.1
LDB3-206ENST00000477489 ADAM33Q9BZ11 813 aa8.18□□□□□ -1.1
LDB3-206ENST00000477489 C22orf23Q9BZE7 217 aa8.18□□□□□ -1.1
LDB3-206ENST00000477489 ATG3Q9NT62 314 aa8.18□□□□□ -1.1
LDB3-206ENST00000477489 AK9Q5TCS8 1911 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 NBPF26B4DH59 902 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 H7C1W4 665 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 DPYSL4O14531 572 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 ERC2O15083 957 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 SURF6O75683 361 aaKnown RBP8.17□□□□□ -1.1
LDB3-206ENST00000477489 ANXA1P04083 346 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 MYL6BP14649 208 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 GSPT1P15170 499 aaKnown RBP8.17□□□□□ -1.1
LDB3-206ENST00000477489 HMGB2P26583 209 aaKnown RBP8.17□□□□□ -1.1
LDB3-206ENST00000477489 NBPF14Q5TI25 921 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 NBPF10Q6P3W6 841 aaKnown RBP8.17□□□□□ -1.1
LDB3-206ENST00000477489 TBC1D9Q6ZT07 1266 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 CLASRPQ8N2M8 674 aaKnown RBP8.17□□□□□ -1.1
LDB3-206ENST00000477489 NBPF15Q8N660 670 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 SLC4A5Q9BY07 1137 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 COPRSQ9NQ92 184 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 CWC25Q9NXE8 425 aaPredicted RBP8.17□□□□□ -1.1
LDB3-206ENST00000477489 VPS9D1Q9Y2B5 631 aa8.17□□□□□ -1.1
LDB3-206ENST00000477489 EXOC6BQ9Y2D4 811 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms