RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 COL4A1P02462 1669 aa13.03□□□□□ -0.32
COL4A5-204ENST00000477429 PPIP5K2O43314 1243 aa13.03□□□□□ -0.32
COL4A5-204ENST00000477429 PDIA6Q15084 440 aa13.03□□□□□ -0.32
COL4A5-204ENST00000477429 PROSER3Q2NL68 480 aa13.03□□□□□ -0.32
COL4A5-204ENST00000477429 NIM1KQ8IY84 436 aa13.03□□□□□ -0.32
COL4A5-204ENST00000477429 YDJCA8MPS7 323 aa13.02□□□□□ -0.33
COL4A5-204ENST00000477429 RAD17O75943 681 aa13.02□□□□□ -0.33
COL4A5-204ENST00000477429 ANXA1P04083 346 aa13.02□□□□□ -0.33
COL4A5-204ENST00000477429 ECE1P42892 770 aa13.02□□□□□ -0.33
COL4A5-204ENST00000477429 CC2D2BQ6DHV5 1058 aa13.02□□□□□ -0.33
COL4A5-204ENST00000477429 CIAPIN1Q6FI81 312 aa13.02□□□□□ -0.33
COL4A5-204ENST00000477429 RBM17Q96I25 401 aaKnown RBP13.02□□□□□ -0.33
COL4A5-204ENST00000477429 NYXQ9GZU5 481 aa13.02□□□□□ -0.33
COL4A5-204ENST00000477429 ADARB2Q9NS39 739 aaKnown RBP13.02□□□□□ -0.33
COL4A5-204ENST00000477429 PGAP2Q9UHJ9 254 aa13.02□□□□□ -0.33
COL4A5-204ENST00000477429 ABCC4O15439 1325 aa13.02□□□□□ -0.33
COL4A5-204ENST00000477429 HTATSF1O43719 755 aaKnown RBP13.01□□□□□ -0.33
COL4A5-204ENST00000477429 EGFRP00533 1210 aa13.01□□□□□ -0.33
COL4A5-204ENST00000477429 MAP2K2P36507 400 aa13.01□□□□□ -0.33
COL4A5-204ENST00000477429 RTFDC1Q9BY42 306 aaPredicted RBP13.01□□□□□ -0.33
COL4A5-204ENST00000477429 ATP6V0A2Q9Y487 856 aa13.01□□□□□ -0.33
COL4A5-204ENST00000477429 IBTKQ9P2D0 1353 aaPredicted RBP13.01□□□□□ -0.33
COL4A5-204ENST00000477429 DUOX1Q9NRD9 1551 aa13.01□□□□□ -0.33
COL4A5-204ENST00000477429 UNC80Q8N2C7 3258 aa13.01□□□□□ -0.33
COL4A5-204ENST00000477429 MNX1P50219 401 aaPredicted RBP13□□□□□ -0.33
COL4A5-204ENST00000477429 GIGYF2Q6Y7W6 1299 aaKnown RBP13□□□□□ -0.33
COL4A5-204ENST00000477429 CFAP53Q96M91 514 aa13□□□□□ -0.33
COL4A5-204ENST00000477429 PLEKHF1Q96S99 279 aa13□□□□□ -0.33
COL4A5-204ENST00000477429 ZNF408Q9H9D4 720 aa13□□□□□ -0.33
COL4A5-204ENST00000477429 ZNRF3Q9ULT6 936 aa13□□□□□ -0.33
COL4A5-204ENST00000477429 COLQQ9Y215 455 aaPredicted RBP13□□□□□ -0.33
COL4A5-204ENST00000477429 DLG5Q8TDM6 1919 aa13□□□□□ -0.33
COL4A5-204ENST00000477429 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
COL4A5-204ENST00000477429 SLC10A5Q5PT55 438 aa12.99□□□□□ -0.33
COL4A5-204ENST00000477429 KIF6Q6ZMV9 814 aa12.99□□□□□ -0.33
COL4A5-204ENST00000477429 KCNQ5Q9NR82 932 aa12.99□□□□□ -0.33
COL4A5-204ENST00000477429 NUDCQ9Y266 331 aa12.99□□□□□ -0.33
COL4A5-204ENST00000477429 ZBTB12Q9Y330 459 aaPredicted RBP12.99□□□□□ -0.33
COL4A5-204ENST00000477429 TAF1P21675 1872 aa12.99□□□□□ -0.33
COL4A5-204ENST00000477429 CEP290O15078 2479 aa12.98□□□□□ -0.33
COL4A5-204ENST00000477429 FAM155AB1AL88 458 aaPredicted RBP12.98□□□□□ -0.33
COL4A5-204ENST00000477429 USP48Q86UV5 1035 aa12.98□□□□□ -0.33
COL4A5-204ENST00000477429 LAMB2P55268 1798 aa12.98□□□□□ -0.33
COL4A5-204ENST00000477429 CA12O43570 354 aa12.97□□□□□ -0.33
COL4A5-204ENST00000477429 BRPF1P55201 1214 aaPredicted RBP12.97□□□□□ -0.33
COL4A5-204ENST00000477429 KIAA2012Q0VF49 1180 aa12.97□□□□□ -0.33
COL4A5-204ENST00000477429 SAMD7Q7Z3H4 446 aa12.97□□□□□ -0.33
COL4A5-204ENST00000477429 ASTN2O75129 1339 aaPredicted RBP12.96□□□□□ -0.33
COL4A5-204ENST00000477429 DPP8Q6V1X1 898 aaPredicted RBP12.96□□□□□ -0.33
COL4A5-204ENST00000477429 SP8Q8IXZ3 490 aa12.96□□□□□ -0.33
COL4A5-204ENST00000477429 NECTIN2Q92692 538 aa12.96□□□□□ -0.33
COL4A5-204ENST00000477429 HHIPL1Q96JK4 782 aa12.96□□□□□ -0.33
COL4A5-204ENST00000477429 NLRP3Q96P20 1036 aa12.96□□□□□ -0.33
COL4A5-204ENST00000477429 CNOT7Q9UIV1 285 aaKnown RBP12.96□□□□□ -0.33
COL4A5-204ENST00000477429 RANBP2P49792 3224 aaKnown RBP12.96□□□□□ -0.33
COL4A5-204ENST00000477429 ADM5C9JUS6 153 aa12.95□□□□□ -0.34
COL4A5-204ENST00000477429 EIF2S2P20042 333 aaKnown RBP12.95□□□□□ -0.34
COL4A5-204ENST00000477429 KRT24Q2M2I5 525 aa12.95□□□□□ -0.34
COL4A5-204ENST00000477429 GRIPAP1Q4V328 841 aa12.95□□□□□ -0.34
COL4A5-204ENST00000477429 NLRP10Q86W26 655 aa12.95□□□□□ -0.34
COL4A5-204ENST00000477429 MICALL2Q8IY33 904 aa12.95□□□□□ -0.34
COL4A5-204ENST00000477429 UTP14AQ9BVJ6 771 aaKnown RBP12.95□□□□□ -0.34
COL4A5-204ENST00000477429 COL25A1Q9BXS0 654 aaPredicted RBP12.95□□□□□ -0.34
COL4A5-204ENST00000477429 PSMD14O00487 310 aa12.94□□□□□ -0.34
COL4A5-204ENST00000477429 HUNKP57058 714 aa12.94□□□□□ -0.34
COL4A5-204ENST00000477429 NFE2L2Q16236 605 aa12.94□□□□□ -0.34
COL4A5-204ENST00000477429 TBC1D10BQ4KMP7 808 aaPredicted RBP12.94□□□□□ -0.34
COL4A5-204ENST00000477429 PARP10Q53GL7 1025 aa12.94□□□□□ -0.34
COL4A5-204ENST00000477429 CDC37L1Q7L3B6 337 aa12.94□□□□□ -0.34
COL4A5-204ENST00000477429 PPP1R42Q7Z4L9 355 aa12.94□□□□□ -0.34
COL4A5-204ENST00000477429 PNISRQ8TF01 805 aaKnown RBP12.94□□□□□ -0.34
COL4A5-204ENST00000477429 VPS33BQ9H267 617 aa12.94□□□□□ -0.34
COL4A5-204ENST00000477429 HPS5Q9UPZ3 1129 aa12.94□□□□□ -0.34
COL4A5-204ENST00000477429 AIMP1Q12904 312 aaKnown RBP12.93□□□□□ -0.34
COL4A5-204ENST00000477429 COPS6Q7L5N1 327 aa12.93□□□□□ -0.34
COL4A5-204ENST00000477429 ZC3H15Q8WU90 426 aaKnown RBP12.93□□□□□ -0.34
COL4A5-204ENST00000477429 BCL2L13Q9BXK5 485 aa12.93□□□□□ -0.34
COL4A5-204ENST00000477429 DBNDD1Q9H9R9 158 aa12.93□□□□□ -0.34
COL4A5-204ENST00000477429 RTL9Q8NET4 1388 aa12.93□□□□□ -0.34
COL4A5-204ENST00000477429 BRCA2P51587 3418 aa12.92□□□□□ -0.34
COL4A5-204ENST00000477429 BBOX1O75936 387 aa12.92□□□□□ -0.34
COL4A5-204ENST00000477429 KIF23Q02241 960 aaPredicted RBP12.92□□□□□ -0.34
COL4A5-204ENST00000477429 GRAPQ13588 217 aa12.92□□□□□ -0.34
COL4A5-204ENST00000477429 GRAPLQ8TC17 118 aaPredicted RBP12.92□□□□□ -0.34
COL4A5-204ENST00000477429 XAGE3Q8WTP9 111 aa12.92□□□□□ -0.34
COL4A5-204ENST00000477429 CELF1Q92879 486 aaKnown RBP12.92□□□□□ -0.34
COL4A5-204ENST00000477429 POLLQ9UGP5 575 aa12.92□□□□□ -0.34
COL4A5-204ENST00000477429 CDHR2Q9BYE9 1310 aa12.91□□□□□ -0.34
COL4A5-204ENST00000477429 LRRC37AA6NMS7 1700 aa12.91□□□□□ -0.34
COL4A5-204ENST00000477429 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
COL4A5-204ENST00000477429 GPSM2P81274 684 aa12.91□□□□□ -0.34
COL4A5-204ENST00000477429 NOGQ13253 232 aa12.91□□□□□ -0.34
COL4A5-204ENST00000477429 TNIP1Q15025 636 aa12.91□□□□□ -0.34
COL4A5-204ENST00000477429 DOK7Q18PE1 504 aa12.91□□□□□ -0.34
COL4A5-204ENST00000477429 RBM26Q5T8P6 1007 aaKnown RBP12.91□□□□□ -0.34
COL4A5-204ENST00000477429 SUPT20HQ8NEM7 779 aa12.91□□□□□ -0.34
COL4A5-204ENST00000477429 RNF186Q9NXI6 227 aa12.91□□□□□ -0.34
COL4A5-204ENST00000477429 VCANP13611 3396 aa12.91□□□□□ -0.34
COL4A5-204ENST00000477429 ANKRD36CQ5JPF3 1778 aa12.91□□□□□ -0.34
COL4A5-204ENST00000477429 ERBB4Q15303 1308 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms