RNA–Protein interactions for RNA: ENST00000477392.1

LINC00996-201, long intergenic non-protein coding RNA 996, humanhuman

TSL 1 (best) BASIC

Gene LINC00996, Length 2,043 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-201ENST00000477392 VPS53Q5VIR6 699 aa18.85■□□□□ 0.61
LINC00996-201ENST00000477392 LARP6Q9BRS8 491 aaKnown RBP18.85■□□□□ 0.61
LINC00996-201ENST00000477392 GPR108Q9NPR9 543 aa18.85■□□□□ 0.61
LINC00996-201ENST00000477392 GRPEL1Q9HAV7 217 aa18.84■□□□□ 0.61
LINC00996-201ENST00000477392 IL15P40933 162 aaPredicted RBP18.84■□□□□ 0.61
LINC00996-201ENST00000477392 TRIM28Q13263 835 aaKnown RBP18.84■□□□□ 0.61
LINC00996-201ENST00000477392 ZNF594Q96JF6 807 aaPredicted RBP18.84■□□□□ 0.61
LINC00996-201ENST00000477392 PDRG1Q9NUG6 133 aa18.84■□□□□ 0.61
LINC00996-201ENST00000477392 NRAPQ86VF7 1730 aa18.83■□□□□ 0.61
LINC00996-201ENST00000477392 EYA2O00167 538 aa18.83■□□□□ 0.61
LINC00996-201ENST00000477392 PRPF40AO75400 957 aaKnown RBP18.83■□□□□ 0.61
LINC00996-201ENST00000477392 ZKSCAN1P17029 563 aaPredicted RBP18.83■□□□□ 0.61
LINC00996-201ENST00000477392 LRRC24Q50LG9 513 aa18.83■□□□□ 0.61
LINC00996-201ENST00000477392 SLC4A9Q96Q91 983 aa18.83■□□□□ 0.61
LINC00996-201ENST00000477392 DNAJC2Q99543 621 aaKnown RBP18.83■□□□□ 0.61
LINC00996-201ENST00000477392 ZNF330Q9Y3S2 320 aaPredicted RBP18.83■□□□□ 0.61
LINC00996-201ENST00000477392 CYP46A1Q9Y6A2 500 aa18.83■□□□□ 0.61
LINC00996-201ENST00000477392 KCNJ4P48050 445 aa18.83■□□□□ 0.6
LINC00996-201ENST00000477392 COL9A3Q14050 684 aaPredicted RBP18.83■□□□□ 0.6
LINC00996-201ENST00000477392 KAT6BQ8WYB5 2073 aa18.83■□□□□ 0.6
LINC00996-201ENST00000477392 TAF5LO75529 589 aa18.82■□□□□ 0.6
LINC00996-201ENST00000477392 CIAO1O76071 339 aa18.82■□□□□ 0.6
LINC00996-201ENST00000477392 STARD3NLO95772 234 aa18.82■□□□□ 0.6
LINC00996-201ENST00000477392 CHGBP05060 677 aa18.82■□□□□ 0.6
LINC00996-201ENST00000477392 KIF6Q6ZMV9 814 aa18.82■□□□□ 0.6
LINC00996-201ENST00000477392 GPT2Q8TD30 523 aa18.82■□□□□ 0.6
LINC00996-201ENST00000477392 TAF6LQ9Y6J9 622 aa18.82■□□□□ 0.6
LINC00996-201ENST00000477392 SPEF2Q9C093 1822 aa18.81■□□□□ 0.6
LINC00996-201ENST00000477392 PUS3Q9BZE2 481 aaKnown RBP18.81■□□□□ 0.6
LINC00996-201ENST00000477392 MAP3K15Q6ZN16 1313 aa18.81■□□□□ 0.6
LINC00996-201ENST00000477392 PALLDQ8WX93 1383 aa18.81■□□□□ 0.6
LINC00996-201ENST00000477392 TCHHQ07283 1943 aa18.81■□□□□ 0.6
LINC00996-201ENST00000477392 PCCAP05165 728 aaPredicted RBP18.81■□□□□ 0.6
LINC00996-201ENST00000477392 ST3GAL1Q11201 340 aa18.81■□□□□ 0.6
LINC00996-201ENST00000477392 USPL1Q5W0Q7 1092 aa18.81■□□□□ 0.6
LINC00996-201ENST00000477392 DDX46Q7L014 1031 aaKnown RBP18.81■□□□□ 0.6
LINC00996-201ENST00000477392 WDR33Q9C0J8 1336 aaKnown RBP18.81■□□□□ 0.6
LINC00996-201ENST00000477392 PLA2G12BQ9BX93 195 aa18.8■□□□□ 0.6
LINC00996-201ENST00000477392 NUP98P52948 1817 aa18.8■□□□□ 0.6
LINC00996-201ENST00000477392 MYH3P11055 1940 aa18.8■□□□□ 0.6
LINC00996-201ENST00000477392 CYP19A1P11511 503 aaPredicted RBP18.79■□□□□ 0.6
LINC00996-201ENST00000477392 TIMM10P62072 90 aa18.79■□□□□ 0.6
LINC00996-201ENST00000477392 CAVIN1Q6NZI2 390 aaKnown RBP18.79■□□□□ 0.6
LINC00996-201ENST00000477392 KBTBD3Q8NAB2 608 aa18.79■□□□□ 0.6
LINC00996-201ENST00000477392 ZSCAN31Q96LW9 406 aaPredicted RBP18.79■□□□□ 0.6
LINC00996-201ENST00000477392 NEUROD6Q96NK8 337 aa18.79■□□□□ 0.6
LINC00996-201ENST00000477392 CCDC9Q9Y3X0 531 aaKnown RBP18.79■□□□□ 0.6
LINC00996-201ENST00000477392 TSGA10IPQ3SY00 556 aa18.79■□□□□ 0.6
LINC00996-201ENST00000477392 RNF20Q5VTR2 975 aa18.79■□□□□ 0.6
LINC00996-201ENST00000477392 GIGYF2Q6Y7W6 1299 aaKnown RBP18.79■□□□□ 0.6
LINC00996-201ENST00000477392 SH2B1Q9NRF2 756 aaPredicted RBP18.79■□□□□ 0.6
LINC00996-201ENST00000477392 HMG20BQ9P0W2 317 aa18.79■□□□□ 0.6
LINC00996-201ENST00000477392 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.79■□□□□ 0.6
LINC00996-201ENST00000477392 LTBP4Q8N2S1 1624 aa18.79■□□□□ 0.6
LINC00996-201ENST00000477392 SH3TC1Q8TE82 1336 aa18.78■□□□□ 0.6
LINC00996-201ENST00000477392 PSMA5P28066 241 aa18.78■□□□□ 0.6
LINC00996-201ENST00000477392 CCDC129Q6ZRS4 1044 aa18.78■□□□□ 0.6
LINC00996-201ENST00000477392 CCDC83Q8IWF9 413 aa18.78■□□□□ 0.6
LINC00996-201ENST00000477392 FAM89AQ96GI7 184 aa18.78■□□□□ 0.6
LINC00996-201ENST00000477392 SEC62Q99442 399 aaKnown RBP18.78■□□□□ 0.6
LINC00996-201ENST00000477392 RTN4Q9NQC3 1192 aaKnown RBP18.78■□□□□ 0.6
LINC00996-201ENST00000477392 PHLPP1O60346 1717 aa18.78■□□□□ 0.6
LINC00996-201ENST00000477392 A0A1B0GUL7 405 aa18.78■□□□□ 0.6
LINC00996-201ENST00000477392 EXOC5O00471 708 aa18.78■□□□□ 0.6
LINC00996-201ENST00000477392 NCLP19338 710 aaKnown RBP18.78■□□□□ 0.6
LINC00996-201ENST00000477392 ZNF445P59923 1031 aa18.78■□□□□ 0.6
LINC00996-201ENST00000477392 HLFQ16534 295 aa18.78■□□□□ 0.6
LINC00996-201ENST00000477392 ZBTB38Q8NAP3 1195 aaPredicted RBP18.78■□□□□ 0.6
LINC00996-201ENST00000477392 ME3Q16798 604 aa18.77■□□□□ 0.6
LINC00996-201ENST00000477392 ZSCAN23Q3MJ62 389 aa18.77■□□□□ 0.6
LINC00996-201ENST00000477392 PAG1Q9NWQ8 432 aa18.77■□□□□ 0.6
LINC00996-201ENST00000477392 TPCN1Q9ULQ1 816 aa18.77■□□□□ 0.6
LINC00996-201ENST00000477392 NSFL1CQ9UNZ2 370 aaKnown RBP18.77■□□□□ 0.6
LINC00996-201ENST00000477392 SMC3Q9UQE7 1217 aa18.77■□□□□ 0.6
LINC00996-201ENST00000477392 CDHR2Q9BYE9 1310 aa18.76■□□□□ 0.59
LINC00996-201ENST00000477392 GOLIM4O00461 696 aa18.76■□□□□ 0.59
LINC00996-201ENST00000477392 CSF1RP07333 972 aa18.76■□□□□ 0.59
LINC00996-201ENST00000477392 RPS6KB1P23443 525 aa18.76■□□□□ 0.59
LINC00996-201ENST00000477392 CCDC57Q2TAC2 916 aa18.76■□□□□ 0.59
LINC00996-201ENST00000477392 MCMDC2Q4G0Z9 681 aa18.76■□□□□ 0.59
LINC00996-201ENST00000477392 RBM27Q9P2N5 1060 aaKnown RBP18.76■□□□□ 0.59
LINC00996-201ENST00000477392 ZBTB1Q9Y2K1 713 aa18.76■□□□□ 0.59
LINC00996-201ENST00000477392 LAMA4Q16363 1823 aa18.76■□□□□ 0.59
LINC00996-201ENST00000477392 SYT1P21579 422 aa18.76■□□□□ 0.59
LINC00996-201ENST00000477392 BLOC1S2Q6QNY1 142 aa18.76■□□□□ 0.59
LINC00996-201ENST00000477392 NLRP10Q86W26 655 aa18.76■□□□□ 0.59
LINC00996-201ENST00000477392 ALDH8A1Q9H2A2 487 aaPredicted RBP18.76■□□□□ 0.59
LINC00996-201ENST00000477392 FBXO3Q9UK99 471 aa18.76■□□□□ 0.59
LINC00996-201ENST00000477392 RIC1Q4ADV7 1423 aa18.75■□□□□ 0.59
LINC00996-201ENST00000477392 ZSCAN22P10073 491 aaPredicted RBP18.75■□□□□ 0.59
LINC00996-201ENST00000477392 SYNE4Q8N205 404 aa18.75■□□□□ 0.59
LINC00996-201ENST00000477392 STX6O43752 255 aa18.74■□□□□ 0.59
LINC00996-201ENST00000477392 GPTP24298 496 aa18.74■□□□□ 0.59
LINC00996-201ENST00000477392 CEP126Q9P2H0 1117 aa18.74■□□□□ 0.59
LINC00996-201ENST00000477392 GJB2P29033 226 aa18.74■□□□□ 0.59
LINC00996-201ENST00000477392 TOB2Q14106 344 aaPredicted RBP18.74■□□□□ 0.59
LINC00996-201ENST00000477392 SLFNL1Q499Z3 407 aa18.74■□□□□ 0.59
LINC00996-201ENST00000477392 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.74■□□□□ 0.59
LINC00996-201ENST00000477392 SYTL4Q96C24 671 aaPredicted RBP18.74■□□□□ 0.59
LINC00996-201ENST00000477392 TCEANC2Q96MN5 208 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms