RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 RTL5Q5HYW3 569 aaPredicted RBP13.91□□□□□ -0.18
SEC13-214ENST00000476597 DPP8Q6V1X1 898 aaPredicted RBP13.91□□□□□ -0.18
SEC13-214ENST00000476597 LDHDQ86WU2 507 aa13.91□□□□□ -0.18
SEC13-214ENST00000476597 WDR63Q8IWG1 891 aa13.91□□□□□ -0.18
SEC13-214ENST00000476597 CCDC191Q8NCU4 936 aa13.91□□□□□ -0.18
SEC13-214ENST00000476597 METTL22Q9BUU2 404 aaPredicted RBP13.91□□□□□ -0.18
SEC13-214ENST00000476597 PCCAP05165 728 aaPredicted RBP13.9□□□□□ -0.18
SEC13-214ENST00000476597 EPHX2P34913 555 aa13.9□□□□□ -0.18
SEC13-214ENST00000476597 TWISTNBQ3B726 338 aaPredicted RBP13.9□□□□□ -0.18
SEC13-214ENST00000476597 KSR2Q6VAB6 950 aa13.9□□□□□ -0.18
SEC13-214ENST00000476597 PNMA8AQ86V59 439 aaPredicted RBP13.9□□□□□ -0.18
SEC13-214ENST00000476597 NIM1KQ8IY84 436 aa13.9□□□□□ -0.18
SEC13-214ENST00000476597 CELF1Q92879 486 aaKnown RBP13.9□□□□□ -0.18
SEC13-214ENST00000476597 GJA3Q9Y6H8 435 aa13.9□□□□□ -0.18
SEC13-214ENST00000476597 CACNA1SQ13698 1873 aa13.89□□□□□ -0.19
SEC13-214ENST00000476597 COL4A5P29400 1685 aa13.89□□□□□ -0.19
SEC13-214ENST00000476597 PI4KAP2A4QPH2 592 aa13.89□□□□□ -0.19
SEC13-214ENST00000476597 SLC4A2P04920 1241 aa13.89□□□□□ -0.19
SEC13-214ENST00000476597 HSP90B1P14625 803 aaKnown RBP13.89□□□□□ -0.19
SEC13-214ENST00000476597 KIAA2012Q0VF49 1180 aa13.89□□□□□ -0.19
SEC13-214ENST00000476597 PI4KAP1Q8N8J0 262 aa13.89□□□□□ -0.19
SEC13-214ENST00000476597 JMYQ8N9B5 988 aa13.89□□□□□ -0.19
SEC13-214ENST00000476597 STK31Q9BXU1 1019 aa13.89□□□□□ -0.19
SEC13-214ENST00000476597 CWC25Q9NXE8 425 aaPredicted RBP13.89□□□□□ -0.19
SEC13-214ENST00000476597 ZNRF3Q9ULT6 936 aa13.89□□□□□ -0.19
SEC13-214ENST00000476597 MAP3K2Q9Y2U5 619 aa13.89□□□□□ -0.19
SEC13-214ENST00000476597 SALL2Q9Y467 1007 aaPredicted RBP13.89□□□□□ -0.19
SEC13-214ENST00000476597 ITGBL1O95965 494 aaPredicted RBP13.88□□□□□ -0.19
SEC13-214ENST00000476597 RPS8P62241 208 aaKnown RBP13.88□□□□□ -0.19
SEC13-214ENST00000476597 CXCL9Q07325 125 aa13.88□□□□□ -0.19
SEC13-214ENST00000476597 EAPPQ56P03 285 aaPredicted RBP13.88□□□□□ -0.19
SEC13-214ENST00000476597 G2E3Q7L622 706 aa13.88□□□□□ -0.19
SEC13-214ENST00000476597 PASKQ96RG2 1323 aa13.88□□□□□ -0.19
SEC13-214ENST00000476597 PDE8AO60658 829 aa13.87□□□□□ -0.19
SEC13-214ENST00000476597 VAMP4O75379 141 aa13.87□□□□□ -0.19
SEC13-214ENST00000476597 IGKV5-2P06315 115 aa13.87□□□□□ -0.19
SEC13-214ENST00000476597 SCNN1DP51172 638 aa13.87□□□□□ -0.19
SEC13-214ENST00000476597 FAM9BQ8IZU0 186 aa13.87□□□□□ -0.19
SEC13-214ENST00000476597 JARID2Q92833 1246 aaPredicted RBP13.87□□□□□ -0.19
SEC13-214ENST00000476597 NSFL1CQ9UNZ2 370 aaKnown RBP13.87□□□□□ -0.19
SEC13-214ENST00000476597 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
SEC13-214ENST00000476597 FANCIQ9NVI1 1328 aa13.87□□□□□ -0.19
SEC13-214ENST00000476597 LMOD1P29536 600 aaPredicted RBP13.86□□□□□ -0.19
SEC13-214ENST00000476597 EPS15P42566 896 aa13.86□□□□□ -0.19
SEC13-214ENST00000476597 SEC31BQ9NQW1 1179 aa13.86□□□□□ -0.19
SEC13-214ENST00000476597 CREBZFQ9NS37 354 aa13.86□□□□□ -0.19
SEC13-214ENST00000476597 ANKRD36CQ5JPF3 1778 aa13.86□□□□□ -0.19
SEC13-214ENST00000476597 GPSM2P81274 684 aa13.85□□□□□ -0.19
SEC13-214ENST00000476597 EXOSC9Q06265 439 aaKnown RBP13.85□□□□□ -0.19
SEC13-214ENST00000476597 NEXNQ0ZGT2 675 aa13.85□□□□□ -0.19
SEC13-214ENST00000476597 CCDC152Q4G0S7 254 aa13.85□□□□□ -0.19
SEC13-214ENST00000476597 CNTROBQ8N137 903 aa13.85□□□□□ -0.19
SEC13-214ENST00000476597 SPINK5Q9NQ38 1064 aaPredicted RBP13.85□□□□□ -0.19
SEC13-214ENST00000476597 POLLQ9UGP5 575 aa13.85□□□□□ -0.19
SEC13-214ENST00000476597 CDHR2Q9BYE9 1310 aa13.85□□□□□ -0.19
SEC13-214ENST00000476597 FLIIQ13045 1269 aa13.84□□□□□ -0.19
SEC13-214ENST00000476597 WASHC4Q2M389 1173 aa13.84□□□□□ -0.19
SEC13-214ENST00000476597 MAP1SQ66K74 1059 aaPredicted RBP13.84□□□□□ -0.19
SEC13-214ENST00000476597 CIAPIN1Q6FI81 312 aa13.84□□□□□ -0.19
SEC13-214ENST00000476597 USP50Q70EL3 339 aaPredicted RBP13.84□□□□□ -0.19
SEC13-214ENST00000476597 GPRC5DQ9NZD1 345 aa13.84□□□□□ -0.19
SEC13-214ENST00000476597 YDJCA8MPS7 323 aa13.83□□□□□ -0.2
SEC13-214ENST00000476597 NEURL1BA8MQ27 555 aa13.83□□□□□ -0.2
SEC13-214ENST00000476597 C6orf229H3BNL8 230 aa13.83□□□□□ -0.2
SEC13-214ENST00000476597 H7C1W4 665 aa13.83□□□□□ -0.2
SEC13-214ENST00000476597 RAD17O75943 681 aa13.83□□□□□ -0.2
SEC13-214ENST00000476597 TNIP1Q15025 636 aa13.83□□□□□ -0.2
SEC13-214ENST00000476597 CWF19L2Q2TBE0 894 aaKnown RBP13.83□□□□□ -0.2
SEC13-214ENST00000476597 TBC1D16Q8TBP0 767 aa13.83□□□□□ -0.2
SEC13-214ENST00000476597 PODXL2Q9NZ53 605 aa13.83□□□□□ -0.2
SEC13-214ENST00000476597 SCN4AP35499 1836 aa13.83□□□□□ -0.2
SEC13-214ENST00000476597 RIMBP2O15034 1052 aa13.82□□□□□ -0.2
SEC13-214ENST00000476597 GMPSP49915 693 aaPredicted RBP13.82□□□□□ -0.2
SEC13-214ENST00000476597 TTLL11Q8NHH1 800 aa13.82□□□□□ -0.2
SEC13-214ENST00000476597 CCDC85AQ96PX6 553 aaPredicted RBP13.82□□□□□ -0.2
SEC13-214ENST00000476597 EYA3Q99504 573 aa13.82□□□□□ -0.2
SEC13-214ENST00000476597 ADARB2Q9NS39 739 aaKnown RBP13.82□□□□□ -0.2
SEC13-214ENST00000476597 TMEM88BA6NKF7 163 aa13.81□□□□□ -0.2
SEC13-214ENST00000476597 FKBP5Q13451 457 aaPredicted RBP13.81□□□□□ -0.2
SEC13-214ENST00000476597 GCKRQ14397 625 aa13.81□□□□□ -0.2
SEC13-214ENST00000476597 DNAAF4Q8WXU2 420 aa13.81□□□□□ -0.2
SEC13-214ENST00000476597 MYH16Q9H6N6 1097 aa13.81□□□□□ -0.2
SEC13-214ENST00000476597 LAMB2P55268 1798 aa13.81□□□□□ -0.2
SEC13-214ENST00000476597 CTSWP56202 376 aa13.8□□□□□ -0.2
SEC13-214ENST00000476597 ANKRD18AQ8IVF6 992 aa13.8□□□□□ -0.2
SEC13-214ENST00000476597 LINS1Q8NG48 757 aa13.8□□□□□ -0.2
SEC13-214ENST00000476597 BCL2L13Q9BXK5 485 aa13.8□□□□□ -0.2
SEC13-214ENST00000476597 ZC3H12CQ9C0D7 883 aaKnown RBP13.8□□□□□ -0.2
SEC13-214ENST00000476597 DBNDD1Q9H9R9 158 aa13.8□□□□□ -0.2
SEC13-214ENST00000476597 ANKIB1Q9P2G1 1089 aa13.8□□□□□ -0.2
SEC13-214ENST00000476597 MKRN1Q9UHC7 482 aaKnown RBP13.8□□□□□ -0.2
SEC13-214ENST00000476597 PGAP2Q9UHJ9 254 aa13.8□□□□□ -0.2
SEC13-214ENST00000476597 DDX60Q8IY21 1712 aaKnown RBP13.8□□□□□ -0.2
SEC13-214ENST00000476597 COL4A1P02462 1669 aa13.79□□□□□ -0.2
SEC13-214ENST00000476597 CASP7P55210 303 aa13.79□□□□□ -0.2
SEC13-214ENST00000476597 DOK7Q18PE1 504 aa13.79□□□□□ -0.2
SEC13-214ENST00000476597 DPF2Q92785 391 aa13.79□□□□□ -0.2
SEC13-214ENST00000476597 GPR101Q96P66 508 aaPredicted RBP13.79□□□□□ -0.2
SEC13-214ENST00000476597 CDC5LQ99459 802 aaKnown RBP13.79□□□□□ -0.2
SEC13-214ENST00000476597 PLA2G12BQ9BX93 195 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms