RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 SGSM2O43147 1006 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 ECEL1O95672 775 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 IVLP07476 585 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 PAX3P23760 479 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 ZC3H6P61129 1189 aaKnown RBP4.88□□□□□ -1.63
CD55-208ENST00000476590 ICA1Q05084 483 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 PSMD2Q13200 908 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 PLA2G2CQ5R387 149 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 NUTM2GQ5VZR2 741 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 CCDC186Q7Z3E2 898 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 NLRP13Q86W25 1043 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 EFCAB13Q8IY85 973 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 RPUSD2Q8IZ73 545 aaKnown RBP4.88□□□□□ -1.63
CD55-208ENST00000476590 NEK11Q8NG66 645 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 ZCRB1Q8TBF4 217 aaKnown RBP4.88□□□□□ -1.63
CD55-208ENST00000476590 PMM1Q92871 262 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 PBXIP1Q96AQ6 731 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 SETD5Q9C0A6 1442 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 GABBR1Q9UBS5 961 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 PNMA2Q9UL42 364 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 UHRF1BP1LA0JNW5 1464 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 PPP1R37O75864 691 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 MYBL2P10244 700 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 RBBP5Q15291 538 aaKnown RBP4.88□□□□□ -1.63
CD55-208ENST00000476590 ARTNQ5T4W7 220 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 RNF20Q5VTR2 975 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 CCDC30Q5VVM6 783 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 TTLL5Q6EMB2 1281 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 LEKR1Q6ZMV7 388 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 GET4Q7L5D6 327 aaPredicted RBP4.88□□□□□ -1.63
CD55-208ENST00000476590 DZIP3Q86Y13 1208 aaKnown RBP4.88□□□□□ -1.63
CD55-208ENST00000476590 SMC5Q8IY18 1101 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 TEX11Q8IYF3 940 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 LARGE2Q8N3Y3 721 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 GIPC2Q8TF65 315 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 DNAAF4Q8WXU2 420 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 SNX21Q969T3 373 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 MTA3Q9BTC8 594 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 MMTAG2Q9BU76 263 aaKnown RBP4.88□□□□□ -1.63
CD55-208ENST00000476590 RMI1Q9H9A7 625 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 SPATS2LQ9NUQ6 558 aaKnown RBP4.88□□□□□ -1.63
CD55-208ENST00000476590 SUN2Q9UH99 717 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 USTQ9Y2C2 406 aa4.88□□□□□ -1.63
CD55-208ENST00000476590 HTATSF1O43719 755 aaKnown RBP4.87□□□□□ -1.63
CD55-208ENST00000476590 CSB-PGBD3P0DP91 1061 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 PRIM1P49642 420 aaKnown RBP4.87□□□□□ -1.63
CD55-208ENST00000476590 RPS6KA3P51812 740 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 RBM6P78332 1123 aaKnown RBP4.87□□□□□ -1.63
CD55-208ENST00000476590 TAGLNQ01995 201 aaKnown RBP4.87□□□□□ -1.63
CD55-208ENST00000476590 TBC1D8BQ0IIM8 1120 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 GRIK3Q13003 919 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 ZRSR1Q15695 479 aaKnown RBP4.87□□□□□ -1.63
CD55-208ENST00000476590 SLC5A9Q2M3M2 681 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 MFSD4BQ5TF39 518 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 LRSAM1Q6UWE0 723 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 NFXL1Q6ZNB6 911 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 DRAXINQ8NBI3 349 aaPredicted RBP4.87□□□□□ -1.63
CD55-208ENST00000476590 MORC4Q8TE76 937 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 THOC1Q96FV9 657 aaKnown RBP4.87□□□□□ -1.63
CD55-208ENST00000476590 KIF2CQ99661 725 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 LZTS2Q9BRK4 669 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 BCL2L13Q9BXK5 485 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 A1CFQ9NQ94 594 aaKnown RBP4.87□□□□□ -1.63
CD55-208ENST00000476590 GNL3LQ9NVN8 582 aaKnown RBP4.87□□□□□ -1.63
CD55-208ENST00000476590 TRAK1Q9UPV9 953 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 CGNL1Q0VF96 1302 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 TMCO5BA8MYB1 307 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 RBAK-RBAKDNI3L0D1 243 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 U2SURPO15042 1029 aaKnown RBP4.87□□□□□ -1.63
CD55-208ENST00000476590 CDKL5O76039 1030 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 IMPDH2P12268 514 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 NAT1P18440 290 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 AMHR2Q16671 573 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 KMT5BQ4FZB7 885 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 ARMC2Q8NEN0 867 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 ARPC5LQ9BPX5 153 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 TRIM6Q9C030 488 aaPredicted RBP4.87□□□□□ -1.63
CD55-208ENST00000476590 GDPD2Q9HCC8 539 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 GPHNQ9NQX3 736 aaPredicted RBP4.87□□□□□ -1.63
CD55-208ENST00000476590 ST7Q9NRC1 585 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 PSD3Q9NYI0 1048 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 SYNPO2Q9UMS6 1093 aa4.87□□□□□ -1.63
CD55-208ENST00000476590 CCNB3Q8WWL7 1395 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 CCDC7Q96M83 1385 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 NCOA1Q15788 1441 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 SNUPNO95149 360 aaKnown RBP4.86□□□□□ -1.63
CD55-208ENST00000476590 OATP04181 439 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 GCFC2P16383 781 aaKnown RBP4.86□□□□□ -1.63
CD55-208ENST00000476590 ELF1P32519 619 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 CORO7P57737 925 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 NEXNQ0ZGT2 675 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 RASA3Q14644 834 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 TBC1D25Q3MII6 688 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 FBXO31Q5XUX0 539 aaPredicted RBP4.86□□□□□ -1.63
CD55-208ENST00000476590 CAVIN1Q6NZI2 390 aaKnown RBP4.86□□□□□ -1.63
CD55-208ENST00000476590 GBP6Q6ZN66 633 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 NCAPG2Q86XI2 1143 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 RBM12BQ8IXT5 1001 aaKnown RBP4.86□□□□□ -1.63
CD55-208ENST00000476590 RNF214Q8ND24 703 aa4.86□□□□□ -1.63
CD55-208ENST00000476590 HELBQ8NG08 1087 aaPredicted RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms