RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 CCDC93Q567U6 631 aa26.6■■□□□ 1.85
MAP1LC3A-204ENST00000476428 GRAPLQ8TC17 118 aaPredicted RBP26.6■■□□□ 1.85
MAP1LC3A-204ENST00000476428 PRELPP51888 382 aa26.59■■□□□ 1.85
MAP1LC3A-204ENST00000476428 C9orf131Q5VYM1 1079 aa26.59■■□□□ 1.85
MAP1LC3A-204ENST00000476428 SLC51AQ86UW1 340 aa26.59■■□□□ 1.85
MAP1LC3A-204ENST00000476428 CCDC152Q4G0S7 254 aa26.58■■□□□ 1.85
MAP1LC3A-204ENST00000476428 CCDC85AQ96PX6 553 aaPredicted RBP26.58■■□□□ 1.85
MAP1LC3A-204ENST00000476428 PLA2G12BQ9BX93 195 aa26.58■■□□□ 1.85
MAP1LC3A-204ENST00000476428 DDX60Q8IY21 1712 aaKnown RBP26.57■■□□□ 1.84
MAP1LC3A-204ENST00000476428 CTSWP56202 376 aa26.57■■□□□ 1.84
MAP1LC3A-204ENST00000476428 CC2D2BQ6DHV5 1058 aa26.57■■□□□ 1.84
MAP1LC3A-204ENST00000476428 RTKN2Q8IZC4 609 aa26.57■■□□□ 1.84
MAP1LC3A-204ENST00000476428 TTLL11Q8NHH1 800 aa26.57■■□□□ 1.84
MAP1LC3A-204ENST00000476428 CELF1Q92879 486 aaKnown RBP26.57■■□□□ 1.84
MAP1LC3A-204ENST00000476428 API5Q9BZZ5 524 aaKnown RBP26.57■■□□□ 1.84
MAP1LC3A-204ENST00000476428 SEC31BQ9NQW1 1179 aa26.57■■□□□ 1.84
MAP1LC3A-204ENST00000476428 ATP6V0A2Q9Y487 856 aa26.57■■□□□ 1.84
MAP1LC3A-204ENST00000476428 GRM8O00222 908 aa26.56■■□□□ 1.84
MAP1LC3A-204ENST00000476428 ARHGAP45Q92619 1136 aa26.56■■□□□ 1.84
MAP1LC3A-204ENST00000476428 TAOK3Q9H2K8 898 aa26.56■■□□□ 1.84
MAP1LC3A-204ENST00000476428 C9orf78Q9NZ63 289 aaPredicted RBP26.56■■□□□ 1.84
MAP1LC3A-204ENST00000476428 LMNB1P20700 586 aa26.55■■□□□ 1.84
MAP1LC3A-204ENST00000476428 SP8Q8IXZ3 490 aa26.55■■□□□ 1.84
MAP1LC3A-204ENST00000476428 RNF181Q9P0P0 153 aa26.55■■□□□ 1.84
MAP1LC3A-204ENST00000476428 KIF16BQ96L93 1317 aa26.55■■□□□ 1.84
MAP1LC3A-204ENST00000476428 LTBP3Q9NS15 1303 aa26.55■■□□□ 1.84
MAP1LC3A-204ENST00000476428 RPS8P62241 208 aaKnown RBP26.53■■□□□ 1.84
MAP1LC3A-204ENST00000476428 FKBP4Q02790 459 aaKnown RBP eCLIP26.53■■□□□ 1.84
MAP1LC3A-204ENST00000476428 LAMB2P55268 1798 aa26.53■■□□□ 1.84
MAP1LC3A-204ENST00000476428 IPO8O15397 1037 aaKnown RBP26.52■■□□□ 1.84
MAP1LC3A-204ENST00000476428 CSF1RP07333 972 aa26.52■■□□□ 1.84
MAP1LC3A-204ENST00000476428 TMC4Q7Z404 712 aa26.52■■□□□ 1.84
MAP1LC3A-204ENST00000476428 TMX4Q9H1E5 349 aaPredicted RBP26.52■■□□□ 1.84
MAP1LC3A-204ENST00000476428 GREM2Q9H772 168 aa26.52■■□□□ 1.84
MAP1LC3A-204ENST00000476428 SNED1Q8TER0 1413 aa26.51■■□□□ 1.83
MAP1LC3A-204ENST00000476428 NBPF7P0C2Y1 421 aaPredicted RBP26.51■■□□□ 1.83
MAP1LC3A-204ENST00000476428 FOXO4P98177 505 aa26.51■■□□□ 1.83
MAP1LC3A-204ENST00000476428 GRIPAP1Q4V328 841 aa26.51■■□□□ 1.83
MAP1LC3A-204ENST00000476428 FRAT1Q92837 279 aaPredicted RBP26.51■■□□□ 1.83
MAP1LC3A-204ENST00000476428 UTYO14607 1347 aa26.5■■□□□ 1.83
MAP1LC3A-204ENST00000476428 CCT4P50991 539 aaKnown RBP26.5■■□□□ 1.83
MAP1LC3A-204ENST00000476428 EPHA10Q5JZY3 1008 aa26.5■■□□□ 1.83
MAP1LC3A-204ENST00000476428 PSMD1Q99460 953 aa26.49■■□□□ 1.83
MAP1LC3A-204ENST00000476428 USP44Q9H0E7 712 aa26.49■■□□□ 1.83
MAP1LC3A-204ENST00000476428 ZNF277Q9NRM2 450 aaPredicted RBP26.49■■□□□ 1.83
MAP1LC3A-204ENST00000476428 CACNA1SQ13698 1873 aa26.49■■□□□ 1.83
MAP1LC3A-204ENST00000476428 TRIM27P14373 513 aa26.48■■□□□ 1.83
MAP1LC3A-204ENST00000476428 ATF7IPQ6VMQ6 1270 aa26.48■■□□□ 1.83
MAP1LC3A-204ENST00000476428 SUCLG2Q96I99 432 aa26.48■■□□□ 1.83
MAP1LC3A-204ENST00000476428 YTHDC1Q96MU7 727 aaKnown RBP26.48■■□□□ 1.83
MAP1LC3A-204ENST00000476428 TNNQ9UQP3 1299 aa26.48■■□□□ 1.83
MAP1LC3A-204ENST00000476428 RTL9Q8NET4 1388 aa26.47■■□□□ 1.83
MAP1LC3A-204ENST00000476428 KIF3CO14782 793 aa26.47■■□□□ 1.83
MAP1LC3A-204ENST00000476428 ANKRD18AQ8IVF6 992 aa26.47■■□□□ 1.83
MAP1LC3A-204ENST00000476428 MPNDQ8N594 471 aa26.47■■□□□ 1.83
MAP1LC3A-204ENST00000476428 COL4A1P02462 1669 aa26.47■■□□□ 1.83
MAP1LC3A-204ENST00000476428 FAM161AQ3B820 660 aa26.46■■□□□ 1.83
MAP1LC3A-204ENST00000476428 ZKSCAN2Q63HK3 967 aa26.46■■□□□ 1.83
MAP1LC3A-204ENST00000476428 LMBR1LQ6UX01 489 aa26.46■■□□□ 1.83
MAP1LC3A-204ENST00000476428 KAZALD1Q96I82 304 aa26.46■■□□□ 1.83
MAP1LC3A-204ENST00000476428 CDC5LQ99459 802 aaKnown RBP26.46■■□□□ 1.83
MAP1LC3A-204ENST00000476428 FER1L6Q2WGJ9 1857 aa26.45■■□□□ 1.83
MAP1LC3A-204ENST00000476428 ITGA6P23229 1130 aa26.45■■□□□ 1.82
MAP1LC3A-204ENST00000476428 INTS3Q68E01 1043 aaKnown RBP26.45■■□□□ 1.82
MAP1LC3A-204ENST00000476428 DPP8Q6V1X1 898 aaPredicted RBP26.45■■□□□ 1.82
MAP1LC3A-204ENST00000476428 IARSP41252 1262 aaKnown RBP26.44■■□□□ 1.82
MAP1LC3A-204ENST00000476428 RTFDC1Q9BY42 306 aaPredicted RBP26.44■■□□□ 1.82
MAP1LC3A-204ENST00000476428 CLUAP1Q96AJ1 413 aa26.43■■□□□ 1.82
MAP1LC3A-204ENST00000476428 NSFL1CQ9UNZ2 370 aaKnown RBP26.43■■□□□ 1.82
MAP1LC3A-204ENST00000476428 CHMP3Q9Y3E7 222 aa26.43■■□□□ 1.82
MAP1LC3A-204ENST00000476428 APLP1P51693 650 aa26.42■■□□□ 1.82
MAP1LC3A-204ENST00000476428 GPSM2P81274 684 aa26.42■■□□□ 1.82
MAP1LC3A-204ENST00000476428 TAF1P21675 1872 aa26.42■■□□□ 1.82
MAP1LC3A-204ENST00000476428 ANKRD18BA2A2Z9 1011 aa26.41■■□□□ 1.82
MAP1LC3A-204ENST00000476428 SUPT20HQ8NEM7 779 aa26.41■■□□□ 1.82
MAP1LC3A-204ENST00000476428 BICC1Q9H694 974 aaKnown RBP26.41■■□□□ 1.82
MAP1LC3A-204ENST00000476428 BSDC1Q9NW68 430 aaPredicted RBP26.41■■□□□ 1.82
MAP1LC3A-204ENST00000476428 ZC3H4Q9UPT8 1303 aaKnown RBP26.4■■□□□ 1.82
MAP1LC3A-204ENST00000476428 IGHMBP2P38935 993 aaKnown RBP26.4■■□□□ 1.82
MAP1LC3A-204ENST00000476428 IFIT5Q13325 482 aaKnown RBP26.4■■□□□ 1.82
MAP1LC3A-204ENST00000476428 RCAN3Q9UKA8 241 aa26.4■■□□□ 1.82
MAP1LC3A-204ENST00000476428 SBF1O95248 1867 aa26.4■■□□□ 1.82
MAP1LC3A-204ENST00000476428 ANKRD44Q8N8A2 993 aa26.39■■□□□ 1.82
MAP1LC3A-204ENST00000476428 RABL6Q3YEC7 729 aaPredicted RBP26.38■■□□□ 1.81
MAP1LC3A-204ENST00000476428 VPS33BQ9H267 617 aa26.38■■□□□ 1.81
MAP1LC3A-204ENST00000476428 POLLQ9UGP5 575 aa26.38■■□□□ 1.81
MAP1LC3A-204ENST00000476428 MINPP1Q9UNW1 487 aa26.38■■□□□ 1.81
MAP1LC3A-204ENST00000476428 PPIP5K2O43314 1243 aa26.37■■□□□ 1.81
MAP1LC3A-204ENST00000476428 UBTFL1P0CB47 393 aaPredicted RBP26.37■■□□□ 1.81
MAP1LC3A-204ENST00000476428 CCDC57Q2TAC2 916 aa26.37■■□□□ 1.81
MAP1LC3A-204ENST00000476428 LARGE2Q8N3Y3 721 aa26.37■■□□□ 1.81
MAP1LC3A-204ENST00000476428 TMEM57Q8N5G2 664 aa26.37■■□□□ 1.81
MAP1LC3A-204ENST00000476428 MPHOSPH8Q99549 860 aa26.37■■□□□ 1.81
MAP1LC3A-204ENST00000476428 MEIS3Q99687 375 aa26.37■■□□□ 1.81
MAP1LC3A-204ENST00000476428 PODXL2Q9NZ53 605 aa26.37■■□□□ 1.81
MAP1LC3A-204ENST00000476428 ANKIB1Q9P2G1 1089 aa26.37■■□□□ 1.81
MAP1LC3A-204ENST00000476428 AOC3Q16853 763 aa26.36■■□□□ 1.81
MAP1LC3A-204ENST00000476428 TBC1D16Q8TBP0 767 aa26.36■■□□□ 1.81
MAP1LC3A-204ENST00000476428 JDP2Q8WYK2 163 aa26.36■■□□□ 1.81
MAP1LC3A-204ENST00000476428 GLTPD2A6NH11 291 aa26.35■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms