RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 FAM26DQ5JW98 314 aa9.03□□□□□ -0.96
PTCD3-211ENST00000476215 ILDR2Q71H61 639 aa9.03□□□□□ -0.96
PTCD3-211ENST00000476215 ZFATQ9P243 1243 aa9.03□□□□□ -0.96
PTCD3-211ENST00000476215 SLC6A14Q9UN76 642 aa9.03□□□□□ -0.96
PTCD3-211ENST00000476215 RTCBQ9Y3I0 505 aaKnown RBP9.03□□□□□ -0.96
PTCD3-211ENST00000476215 PATL2C9JE40 543 aaKnown RBP9.02□□□□□ -0.97
PTCD3-211ENST00000476215 HOXD8P13378 290 aaPredicted RBP9.02□□□□□ -0.97
PTCD3-211ENST00000476215 NID1P14543 1247 aa9.02□□□□□ -0.97
PTCD3-211ENST00000476215 MTMR7Q9Y216 660 aa9.02□□□□□ -0.97
PTCD3-211ENST00000476215 KCNMB2Q9Y691 235 aa9.02□□□□□ -0.97
PTCD3-211ENST00000476215 ZBTB7CA1YPR0 619 aa9.01□□□□□ -0.97
PTCD3-211ENST00000476215 M0R082 166 aa9.01□□□□□ -0.97
PTCD3-211ENST00000476215 PROCP04070 461 aa9.01□□□□□ -0.97
PTCD3-211ENST00000476215 ZNF417Q8TAU3 575 aa9.01□□□□□ -0.97
PTCD3-211ENST00000476215 CCER1Q8TC90 406 aaPredicted RBP9.01□□□□□ -0.97
PTCD3-211ENST00000476215 TRPM4Q8TD43 1214 aa9.01□□□□□ -0.97
PTCD3-211ENST00000476215 ZNF587Q96SQ5 575 aaPredicted RBP9.01□□□□□ -0.97
PTCD3-211ENST00000476215 DNAJB12Q9NXW2 375 aaKnown RBP9.01□□□□□ -0.97
PTCD3-211ENST00000476215 SEPT3Q9UH03 358 aa9.01□□□□□ -0.97
PTCD3-211ENST00000476215 NAA30Q147X3 362 aaPredicted RBP9□□□□□ -0.97
PTCD3-211ENST00000476215 PCSK7Q16549 785 aa9□□□□□ -0.97
PTCD3-211ENST00000476215 GPAT2Q6NUI2 795 aa9□□□□□ -0.97
PTCD3-211ENST00000476215 PNMA5Q96PV4 448 aa9□□□□□ -0.97
PTCD3-211ENST00000476215 PLVAPQ9BX97 442 aa9□□□□□ -0.97
PTCD3-211ENST00000476215 UBE2OQ9C0C9 1292 aaKnown RBP9□□□□□ -0.97
PTCD3-211ENST00000476215 NAGPAQ9UK23 515 aa9□□□□□ -0.97
PTCD3-211ENST00000476215 IVNS1ABPQ9Y6Y0 642 aa9□□□□□ -0.97
PTCD3-211ENST00000476215 GPLD1P80108 840 aa8.99□□□□□ -0.97
PTCD3-211ENST00000476215 TXNDC2Q86VQ3 553 aa8.99□□□□□ -0.97
PTCD3-211ENST00000476215 SPOCK3Q9BQ16 436 aa8.99□□□□□ -0.97
PTCD3-211ENST00000476215 FRRS1LQ9P0K9 344 aa8.99□□□□□ -0.97
PTCD3-211ENST00000476215 ABL1P00519 1130 aa8.98□□□□□ -0.97
PTCD3-211ENST00000476215 SPATA31C1P0DKV0 1188 aa8.98□□□□□ -0.97
PTCD3-211ENST00000476215 NRLP54845 237 aa8.98□□□□□ -0.97
PTCD3-211ENST00000476215 TRIM26Q12899 539 aaPredicted RBP8.98□□□□□ -0.97
PTCD3-211ENST00000476215 STIM2Q9P246 746 aa8.98□□□□□ -0.97
PTCD3-211ENST00000476215 SPDYE3A6NKU9 549 aa8.97□□□□□ -0.97
PTCD3-211ENST00000476215 ZBTB42B2RXF5 422 aa8.97□□□□□ -0.97
PTCD3-211ENST00000476215 MSTNO14793 375 aa8.97□□□□□ -0.97
PTCD3-211ENST00000476215 TARSP26639 723 aaKnown RBP8.97□□□□□ -0.97
PTCD3-211ENST00000476215 SERPINB4P48594 390 aa8.97□□□□□ -0.97
PTCD3-211ENST00000476215 DHX32Q7L7V1 743 aaKnown RBP8.97□□□□□ -0.97
PTCD3-211ENST00000476215 GTF3C2Q8WUA4 911 aaPredicted RBP8.97□□□□□ -0.97
PTCD3-211ENST00000476215 TTC9Q92623 222 aa8.97□□□□□ -0.97
PTCD3-211ENST00000476215 FAM13BQ9NYF5 915 aa8.97□□□□□ -0.97
PTCD3-211ENST00000476215 TLR7Q9NYK1 1049 aaKnown RBP8.97□□□□□ -0.97
PTCD3-211ENST00000476215 GNEQ9Y223 722 aaKnown RBP8.97□□□□□ -0.97
PTCD3-211ENST00000476215 LILRB5O75023 590 aa8.96□□□□□ -0.98
PTCD3-211ENST00000476215 XYLBO75191 536 aa8.96□□□□□ -0.98
PTCD3-211ENST00000476215 SASH3O75995 380 aa8.96□□□□□ -0.98
PTCD3-211ENST00000476215 RARAP10276 462 aa8.96□□□□□ -0.98
PTCD3-211ENST00000476215 SOX18P35713 384 aa8.96□□□□□ -0.98
PTCD3-211ENST00000476215 TRIP4Q15650 581 aaPredicted RBP8.96□□□□□ -0.98
PTCD3-211ENST00000476215 C8orf86Q6ZUL3 223 aa8.96□□□□□ -0.98
PTCD3-211ENST00000476215 RGL4Q8IZJ4 473 aa8.96□□□□□ -0.98
PTCD3-211ENST00000476215 ABTB2Q8N961 1025 aa8.96□□□□□ -0.98
PTCD3-211ENST00000476215 USP20Q9Y2K6 914 aa8.96□□□□□ -0.98
PTCD3-211ENST00000476215 HELQQ8TDG4 1101 aa8.95□□□□□ -0.98
PTCD3-211ENST00000476215 LPIN3Q9BQK8 851 aa8.95□□□□□ -0.98
PTCD3-211ENST00000476215 ANO2Q9NQ90 1003 aa8.95□□□□□ -0.98
PTCD3-211ENST00000476215 ZAP70P43403 619 aa8.94□□□□□ -0.98
PTCD3-211ENST00000476215 ZNF211Q13398 564 aaPredicted RBP8.94□□□□□ -0.98
PTCD3-211ENST00000476215 GRIK5Q16478 980 aa8.94□□□□□ -0.98
PTCD3-211ENST00000476215 PSAPL1Q6NUJ1 521 aa8.94□□□□□ -0.98
PTCD3-211ENST00000476215 CD163Q86VB7 1156 aa8.94□□□□□ -0.98
PTCD3-211ENST00000476215 CMTR1Q8N1G2 835 aaKnown RBP8.94□□□□□ -0.98
PTCD3-211ENST00000476215 C1QTNF9BB2RNN3 333 aa8.93□□□□□ -0.98
PTCD3-211ENST00000476215 ZBTB39O15060 712 aa8.93□□□□□ -0.98
PTCD3-211ENST00000476215 CHRNA4P43681 627 aa8.93□□□□□ -0.98
PTCD3-211ENST00000476215 AFF1P51825 1210 aaKnown RBP8.93□□□□□ -0.98
PTCD3-211ENST00000476215 KRT25Q7Z3Z0 450 aa8.93□□□□□ -0.98
PTCD3-211ENST00000476215 NLRP13Q86W25 1043 aa8.93□□□□□ -0.98
PTCD3-211ENST00000476215 PIK3R5Q8WYR1 880 aa8.93□□□□□ -0.98
PTCD3-211ENST00000476215 NPR3P17342 541 aa8.92□□□□□ -0.98
PTCD3-211ENST00000476215 MTMR3Q13615 1198 aa8.92□□□□□ -0.98
PTCD3-211ENST00000476215 GZF1Q9H116 711 aaPredicted RBP8.92□□□□□ -0.98
PTCD3-211ENST00000476215 JPH1Q9HDC5 661 aaPredicted RBP8.92□□□□□ -0.98
PTCD3-211ENST00000476215 EGFL7Q9UHF1 273 aa8.92□□□□□ -0.98
PTCD3-211ENST00000476215 MMP20O60882 483 aa8.91□□□□□ -0.98
PTCD3-211ENST00000476215 PLAURQ03405 335 aa8.91□□□□□ -0.98
PTCD3-211ENST00000476215 TBC1D8BQ0IIM8 1120 aa8.91□□□□□ -0.98
PTCD3-211ENST00000476215 PRRT3Q5FWE3 981 aa8.91□□□□□ -0.98
PTCD3-211ENST00000476215 PERM1Q5SV97 790 aa8.91□□□□□ -0.98
PTCD3-211ENST00000476215 FAM35AQ86V20 835 aa8.91□□□□□ -0.98
PTCD3-211ENST00000476215 IGFLR1Q9H665 355 aa8.91□□□□□ -0.98
PTCD3-211ENST00000476215 H3BRB1 525 aa8.9□□□□□ -0.98
PTCD3-211ENST00000476215 RGS9O75916 674 aaPredicted RBP8.9□□□□□ -0.98
PTCD3-211ENST00000476215 FKBP4Q02790 459 aaKnown RBP eCLIP8.9□□□□□ -0.98
PTCD3-211ENST00000476215 GLYCTKQ8IVS8 523 aa8.9□□□□□ -0.98
PTCD3-211ENST00000476215 OR13H1Q8NG92 308 aa8.9□□□□□ -0.98
PTCD3-211ENST00000476215 TUT1Q9H6E5 874 aaKnown RBP8.9□□□□□ -0.98
PTCD3-211ENST00000476215 SOWAHDA6NJG2 315 aa8.89□□□□□ -0.99
PTCD3-211ENST00000476215 ICMTO60725 284 aa8.89□□□□□ -0.99
PTCD3-211ENST00000476215 PSAPP07602 524 aa8.89□□□□□ -0.99
PTCD3-211ENST00000476215 SF3B2Q13435 895 aaKnown RBP8.89□□□□□ -0.99
PTCD3-211ENST00000476215 NUDT8Q8WV74 236 aa8.89□□□□□ -0.99
PTCD3-211ENST00000476215 FNDC3AQ9Y2H6 1198 aaKnown RBP8.89□□□□□ -0.99
PTCD3-211ENST00000476215 A0A0A0MRY4 1105 aa8.88□□□□□ -0.99
PTCD3-211ENST00000476215 UBAP1LF5GYI3 381 aa8.88□□□□□ -0.99
PTCD3-211ENST00000476215 CPB1P15086 417 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms