RNA–Protein interactions for RNA: ENST00000476142.1

CCDC66-216, Transcript of coiled-coil domain containing 66, humanhuman

TSL 2

Gene CCDC66, Length 2,783 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-216ENST00000476142 DNAJC10Q8IXB1 793 aa10.7□□□□□ -0.7
CCDC66-216ENST00000476142 CCDC191Q8NCU4 936 aa10.7□□□□□ -0.7
CCDC66-216ENST00000476142 TM6SF1Q9BZW5 370 aa10.7□□□□□ -0.7
CCDC66-216ENST00000476142 TAF6LQ9Y6J9 622 aa10.7□□□□□ -0.7
CCDC66-216ENST00000476142 TIMM10P62072 90 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 COL9A3Q14050 684 aaPredicted RBP10.69□□□□□ -0.7
CCDC66-216ENST00000476142 LRRC24Q50LG9 513 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 PIGBQ92521 554 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 SYTL4Q96C24 671 aaPredicted RBP10.69□□□□□ -0.7
CCDC66-216ENST00000476142 STRCQ7RTU9 1775 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 COL15A1P39059 1388 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 A0A0G2JS52 829 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 SYCE3A1L190 88 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 GOLIM4O00461 696 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 STX6O43752 255 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 SYT1P21579 422 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 GJB2P29033 226 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 BLOC1S2Q6QNY1 142 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 KIF6Q6ZMV9 814 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 ANP32BQ92688 251 aaKnown RBP10.69□□□□□ -0.7
CCDC66-216ENST00000476142 KCNB2Q92953 911 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 SEC62Q99442 399 aaKnown RBP10.69□□□□□ -0.7
CCDC66-216ENST00000476142 TMEM63CQ9P1W3 806 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 LAMB4A4D0S4 1761 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 MED23Q9ULK4 1368 aa10.69□□□□□ -0.7
CCDC66-216ENST00000476142 MBD3O95983 291 aa10.68□□□□□ -0.7
CCDC66-216ENST00000476142 ZSCAN22P10073 491 aaPredicted RBP10.68□□□□□ -0.7
CCDC66-216ENST00000476142 ZNF445P59923 1031 aa10.68□□□□□ -0.7
CCDC66-216ENST00000476142 ME3Q16798 604 aa10.68□□□□□ -0.7
CCDC66-216ENST00000476142 ATG9AQ7Z3C6 839 aa10.68□□□□□ -0.7
CCDC66-216ENST00000476142 TRIM44Q96DX7 344 aaPredicted RBP10.68□□□□□ -0.7
CCDC66-216ENST00000476142 ZSCAN31Q96LW9 406 aaPredicted RBP10.68□□□□□ -0.7
CCDC66-216ENST00000476142 HAUS7Q99871 368 aa10.68□□□□□ -0.7
CCDC66-216ENST00000476142 RRAGDQ9NQL2 400 aaPredicted RBP10.68□□□□□ -0.7
CCDC66-216ENST00000476142 TAF5LO75529 589 aa10.68□□□□□ -0.7
CCDC66-216ENST00000476142 IL15P40933 162 aaPredicted RBP10.68□□□□□ -0.7
CCDC66-216ENST00000476142 USP48Q86UV5 1035 aa10.68□□□□□ -0.7
CCDC66-216ENST00000476142 SH2B1Q9NRF2 756 aaPredicted RBP10.68□□□□□ -0.7
CCDC66-216ENST00000476142 TPCN1Q9ULQ1 816 aa10.68□□□□□ -0.7
CCDC66-216ENST00000476142 VPS37CA5D8V6 355 aaPredicted RBP10.67□□□□□ -0.7
CCDC66-216ENST00000476142 EYA2O00167 538 aa10.67□□□□□ -0.7
CCDC66-216ENST00000476142 GADD45BO75293 160 aaPredicted RBP10.67□□□□□ -0.7
CCDC66-216ENST00000476142 PRIM1P49642 420 aaKnown RBP10.67□□□□□ -0.7
CCDC66-216ENST00000476142 SLFNL1Q499Z3 407 aa10.67□□□□□ -0.7
CCDC66-216ENST00000476142 TAF7LQ5H9L4 462 aa10.67□□□□□ -0.7
CCDC66-216ENST00000476142 FAM89AQ96GI7 184 aa10.67□□□□□ -0.7
CCDC66-216ENST00000476142 PUS3Q9BZE2 481 aaKnown RBP10.67□□□□□ -0.7
CCDC66-216ENST00000476142 CNPY2Q9Y2B0 182 aa10.67□□□□□ -0.7
CCDC66-216ENST00000476142 STARD3NLO95772 234 aa10.67□□□□□ -0.7
CCDC66-216ENST00000476142 STK3Q13188 491 aa10.67□□□□□ -0.7
CCDC66-216ENST00000476142 CCDC57Q2TAC2 916 aa10.67□□□□□ -0.7
CCDC66-216ENST00000476142 SNRKQ9NRH2 765 aa10.67□□□□□ -0.7
CCDC66-216ENST00000476142 TNS2Q63HR2 1409 aa10.67□□□□□ -0.7
CCDC66-216ENST00000476142 RPS6KB1P23443 525 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 GPTP24298 496 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 TCIRG1Q13488 830 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 MCMDC2Q4G0Z9 681 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 ATG3Q9NT62 314 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 PAG1Q9NWQ8 432 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 ZNF609O15014 1411 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 A0A1B0GUL7 405 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 FIBPO43427 364 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 F13A1P00488 732 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 GORABQ5T7V8 394 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 RBSNQ9H1K0 784 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 HMG20BQ9P0W2 317 aa10.66□□□□□ -0.7
CCDC66-216ENST00000476142 IFIT1P09914 478 aaKnown RBP10.65□□□□□ -0.7
CCDC66-216ENST00000476142 ST3GAL1Q11201 340 aa10.65□□□□□ -0.7
CCDC66-216ENST00000476142 POTEDQ86YR6 584 aa10.65□□□□□ -0.7
CCDC66-216ENST00000476142 KBTBD3Q8NAB2 608 aa10.65□□□□□ -0.7
CCDC66-216ENST00000476142 ISCA1Q9BUE6 129 aa10.65□□□□□ -0.7
CCDC66-216ENST00000476142 CEP126Q9P2H0 1117 aa10.65□□□□□ -0.7
CCDC66-216ENST00000476142 ANKRD1Q15327 319 aa10.65□□□□□ -0.7
CCDC66-216ENST00000476142 TEX13AQ9BXU3 409 aaPredicted RBP10.65□□□□□ -0.7
CCDC66-216ENST00000476142 ABCA3Q99758 1704 aa10.65□□□□□ -0.7
CCDC66-216ENST00000476142 HSP90B1P14625 803 aaKnown RBP10.65□□□□□ -0.71
CCDC66-216ENST00000476142 FGD1P98174 961 aa10.65□□□□□ -0.71
CCDC66-216ENST00000476142 FKBP4Q02790 459 aaKnown RBP eCLIP10.65□□□□□ -0.71
CCDC66-216ENST00000476142 SYNE4Q8N205 404 aa10.65□□□□□ -0.71
CCDC66-216ENST00000476142 SYAP1Q96A49 352 aaPredicted RBP10.65□□□□□ -0.71
CCDC66-216ENST00000476142 ATP6V1DQ9Y5K8 247 aa10.65□□□□□ -0.71
CCDC66-216ENST00000476142 U3KPZ7 1027 aaPredicted RBP10.65□□□□□ -0.71
CCDC66-216ENST00000476142 UBR2Q8IWV8 1755 aa10.64□□□□□ -0.71
CCDC66-216ENST00000476142 LRSAM1Q6UWE0 723 aa10.64□□□□□ -0.71
CCDC66-216ENST00000476142 NEK1Q96PY6 1258 aa10.64□□□□□ -0.71
CCDC66-216ENST00000476142 CCDC173Q0VFZ6 552 aa10.64□□□□□ -0.71
CCDC66-216ENST00000476142 TOB2Q14106 344 aaPredicted RBP10.64□□□□□ -0.71
CCDC66-216ENST00000476142 KRT32Q14532 448 aa10.64□□□□□ -0.71
CCDC66-216ENST00000476142 HLFQ16534 295 aa10.64□□□□□ -0.71
CCDC66-216ENST00000476142 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
CCDC66-216ENST00000476142 LARP1BQ659C4 914 aaKnown RBP10.64□□□□□ -0.71
CCDC66-216ENST00000476142 RNF214Q8ND24 703 aa10.64□□□□□ -0.71
CCDC66-216ENST00000476142 LRRC2Q9BYS8 371 aa10.64□□□□□ -0.71
CCDC66-216ENST00000476142 GPR108Q9NPR9 543 aa10.64□□□□□ -0.71
CCDC66-216ENST00000476142 MTMR6Q9Y217 621 aa10.64□□□□□ -0.71
CCDC66-216ENST00000476142 CIAO1O76071 339 aa10.63□□□□□ -0.71
CCDC66-216ENST00000476142 ADORA1P30542 326 aa10.63□□□□□ -0.71
CCDC66-216ENST00000476142 DNM1Q05193 864 aaKnown RBP10.63□□□□□ -0.71
CCDC66-216ENST00000476142 IFIT5Q13325 482 aaKnown RBP10.63□□□□□ -0.71
CCDC66-216ENST00000476142 FERMT3Q86UX7 667 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms