RNA–Protein interactions for RNA: ENST00000476139.5

TVP23B-202, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 1 (best) BASIC

Gene TVP23B, Length 2,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-202ENST00000476139 CCDC85AQ96PX6 553 aaPredicted RBP19.97■□□□□ 0.79
TVP23B-202ENST00000476139 SNRKQ9NRH2 765 aa19.97■□□□□ 0.79
TVP23B-202ENST00000476139 ISY1Q9ULR0 285 aaKnown RBP19.97■□□□□ 0.79
TVP23B-202ENST00000476139 VPS53Q5VIR6 699 aa19.96■□□□□ 0.79
TVP23B-202ENST00000476139 PUS3Q9BZE2 481 aaKnown RBP19.96■□□□□ 0.79
TVP23B-202ENST00000476139 ATG3Q9NT62 314 aa19.96■□□□□ 0.79
TVP23B-202ENST00000476139 LAMB4A4D0S4 1761 aa19.96■□□□□ 0.79
TVP23B-202ENST00000476139 CCDC129Q6ZRS4 1044 aa19.96■□□□□ 0.79
TVP23B-202ENST00000476139 CCDC83Q8IWF9 413 aa19.96■□□□□ 0.79
TVP23B-202ENST00000476139 TNS2Q63HR2 1409 aa19.96■□□□□ 0.79
TVP23B-202ENST00000476139 ESPNB1AK53 854 aa19.95■□□□□ 0.78
TVP23B-202ENST00000476139 SHANK3Q9BYB0 1731 aa19.95■□□□□ 0.78
TVP23B-202ENST00000476139 TAF5LO75529 589 aa19.95■□□□□ 0.78
TVP23B-202ENST00000476139 TM6SF1Q9BZW5 370 aa19.95■□□□□ 0.78
TVP23B-202ENST00000476139 UBR2Q8IWV8 1755 aa19.95■□□□□ 0.78
TVP23B-202ENST00000476139 FAM89AQ96GI7 184 aa19.95■□□□□ 0.78
TVP23B-202ENST00000476139 RPAP1Q9BWH6 1393 aaPredicted RBP19.95■□□□□ 0.78
TVP23B-202ENST00000476139 MED23Q9ULK4 1368 aa19.95■□□□□ 0.78
TVP23B-202ENST00000476139 ABCA3Q99758 1704 aa19.94■□□□□ 0.78
TVP23B-202ENST00000476139 ME3Q16798 604 aa19.94■□□□□ 0.78
TVP23B-202ENST00000476139 SYNE4Q8N205 404 aa19.94■□□□□ 0.78
TVP23B-202ENST00000476139 NECAB1Q8N987 351 aa19.94■□□□□ 0.78
TVP23B-202ENST00000476139 NAP1L5Q96NT1 182 aaPredicted RBP19.94■□□□□ 0.78
TVP23B-202ENST00000476139 HAUS7Q99871 368 aa19.94■□□□□ 0.78
TVP23B-202ENST00000476139 PRIM1P49642 420 aaKnown RBP19.94■□□□□ 0.78
TVP23B-202ENST00000476139 TCIRG1Q13488 830 aa19.94■□□□□ 0.78
TVP23B-202ENST00000476139 SYT1P21579 422 aa19.93■□□□□ 0.78
TVP23B-202ENST00000476139 TMEM63CQ9P1W3 806 aa19.93■□□□□ 0.78
TVP23B-202ENST00000476139 TPCN1Q9ULQ1 816 aa19.93■□□□□ 0.78
TVP23B-202ENST00000476139 ST3GAL1Q11201 340 aa19.93■□□□□ 0.78
TVP23B-202ENST00000476139 SYTL4Q96C24 671 aaPredicted RBP19.93■□□□□ 0.78
TVP23B-202ENST00000476139 ISCA1Q9BUE6 129 aa19.93■□□□□ 0.78
TVP23B-202ENST00000476139 WDR33Q9C0J8 1336 aaKnown RBP19.93■□□□□ 0.78
TVP23B-202ENST00000476139 RBSNQ9H1K0 784 aa19.92■□□□□ 0.78
TVP23B-202ENST00000476139 SMC3Q9UQE7 1217 aa19.92■□□□□ 0.78
TVP23B-202ENST00000476139 CLCN1P35523 988 aa19.92■□□□□ 0.78
TVP23B-202ENST00000476139 SLC4A9Q96Q91 983 aa19.92■□□□□ 0.78
TVP23B-202ENST00000476139 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.92■□□□□ 0.78
TVP23B-202ENST00000476139 EYA2O00167 538 aa19.92■□□□□ 0.78
TVP23B-202ENST00000476139 GOLIM4O00461 696 aa19.91■□□□□ 0.78
TVP23B-202ENST00000476139 TOGARAM1Q9Y4F4 1720 aa19.91■□□□□ 0.78
TVP23B-202ENST00000476139 SYCE3A1L190 88 aa19.91■□□□□ 0.78
TVP23B-202ENST00000476139 STX6O43752 255 aa19.91■□□□□ 0.78
TVP23B-202ENST00000476139 GADD45BO75293 160 aaPredicted RBP19.91■□□□□ 0.78
TVP23B-202ENST00000476139 IL15P40933 162 aaPredicted RBP19.91■□□□□ 0.78
TVP23B-202ENST00000476139 HLFQ16534 295 aa19.91■□□□□ 0.78
TVP23B-202ENST00000476139 ZNF609O15014 1411 aa19.91■□□□□ 0.78
TVP23B-202ENST00000476139 KAT6BQ8WYB5 2073 aa19.9■□□□□ 0.78
TVP23B-202ENST00000476139 GJB2P29033 226 aa19.9■□□□□ 0.78
TVP23B-202ENST00000476139 ZNF445P59923 1031 aa19.9■□□□□ 0.78
TVP23B-202ENST00000476139 RNF20Q5VTR2 975 aa19.9■□□□□ 0.78
TVP23B-202ENST00000476139 A0A1B0GUL7 405 aa19.89■□□□□ 0.78
TVP23B-202ENST00000476139 STARD3NLO95772 234 aa19.89■□□□□ 0.78
TVP23B-202ENST00000476139 GPTP24298 496 aa19.89■□□□□ 0.78
TVP23B-202ENST00000476139 USP48Q86UV5 1035 aa19.89■□□□□ 0.78
TVP23B-202ENST00000476139 PAPPAQ13219 1627 aa19.89■□□□□ 0.78
TVP23B-202ENST00000476139 NUP188Q5SRE5 1749 aa19.89■□□□□ 0.78
TVP23B-202ENST00000476139 PSMA5P28066 241 aa19.89■□□□□ 0.77
TVP23B-202ENST00000476139 BLOC1S2Q6QNY1 142 aa19.89■□□□□ 0.77
TVP23B-202ENST00000476139 ZSCAN22P10073 491 aaPredicted RBP19.89■□□□□ 0.77
TVP23B-202ENST00000476139 CCDC57Q2TAC2 916 aa19.89■□□□□ 0.77
TVP23B-202ENST00000476139 KBTBD3Q8NAB2 608 aa19.89■□□□□ 0.77
TVP23B-202ENST00000476139 ANP32BQ92688 251 aaKnown RBP19.89■□□□□ 0.77
TVP23B-202ENST00000476139 MCMDC2Q4G0Z9 681 aa19.88■□□□□ 0.77
TVP23B-202ENST00000476139 PAG1Q9NWQ8 432 aa19.88■□□□□ 0.77
TVP23B-202ENST00000476139 USPL1Q5W0Q7 1092 aa19.88■□□□□ 0.77
TVP23B-202ENST00000476139 KIF6Q6ZMV9 814 aa19.88■□□□□ 0.77
TVP23B-202ENST00000476139 VSIG10Q8N0Z9 540 aa19.88■□□□□ 0.77
TVP23B-202ENST00000476139 RNF214Q8ND24 703 aa19.88■□□□□ 0.77
TVP23B-202ENST00000476139 ZSCAN31Q96LW9 406 aaPredicted RBP19.88■□□□□ 0.77
TVP23B-202ENST00000476139 TEX13AQ9BXU3 409 aaPredicted RBP19.87■□□□□ 0.77
TVP23B-202ENST00000476139 CNPY2Q9Y2B0 182 aa19.87■□□□□ 0.77
TVP23B-202ENST00000476139 NHSL1Q5SYE7 1610 aa19.87■□□□□ 0.77
TVP23B-202ENST00000476139 RPS6KB1P23443 525 aa19.87■□□□□ 0.77
TVP23B-202ENST00000476139 SH2B1Q9NRF2 756 aaPredicted RBP19.87■□□□□ 0.77
TVP23B-202ENST00000476139 TJP1Q07157 1748 aa19.87■□□□□ 0.77
TVP23B-202ENST00000476139 EXOC5O00471 708 aa19.86■□□□□ 0.77
TVP23B-202ENST00000476139 TOB2Q14106 344 aaPredicted RBP19.86■□□□□ 0.77
TVP23B-202ENST00000476139 CYP21A2P08686 494 aa19.86■□□□□ 0.77
TVP23B-202ENST00000476139 GPR108Q9NPR9 543 aa19.86■□□□□ 0.77
TVP23B-202ENST00000476139 JCADQ9P266 1359 aa19.86■□□□□ 0.77
TVP23B-202ENST00000476139 STK3Q13188 491 aa19.86■□□□□ 0.77
TVP23B-202ENST00000476139 CEP126Q9P2H0 1117 aa19.86■□□□□ 0.77
TVP23B-202ENST00000476139 IFIT1P09914 478 aaKnown RBP19.85■□□□□ 0.77
TVP23B-202ENST00000476139 CYP19A1P11511 503 aaPredicted RBP19.85■□□□□ 0.77
TVP23B-202ENST00000476139 CCDC173Q0VFZ6 552 aa19.85■□□□□ 0.77
TVP23B-202ENST00000476139 TRIM28Q13263 835 aaKnown RBP19.85■□□□□ 0.77
TVP23B-202ENST00000476139 TSGA10IPQ3SY00 556 aa19.85■□□□□ 0.77
TVP23B-202ENST00000476139 ZBTB38Q8NAP3 1195 aaPredicted RBP19.85■□□□□ 0.77
TVP23B-202ENST00000476139 ZBTB1Q9Y2K1 713 aa19.85■□□□□ 0.77
TVP23B-202ENST00000476139 CIAO1O76071 339 aa19.85■□□□□ 0.77
TVP23B-202ENST00000476139 F13A1P00488 732 aa19.85■□□□□ 0.77
TVP23B-202ENST00000476139 ADORA1P30542 326 aa19.85■□□□□ 0.77
TVP23B-202ENST00000476139 GIGYF2Q6Y7W6 1299 aaKnown RBP19.85■□□□□ 0.77
TVP23B-202ENST00000476139 MAP3K15Q6ZN16 1313 aa19.84■□□□□ 0.77
TVP23B-202ENST00000476139 PCCAP05165 728 aaPredicted RBP19.84■□□□□ 0.77
TVP23B-202ENST00000476139 FKBP4Q02790 459 aaKnown RBP eCLIP19.84■□□□□ 0.77
TVP23B-202ENST00000476139 HMG20BQ9P0W2 317 aa19.84■□□□□ 0.77
TVP23B-202ENST00000476139 A0A0G2JLW4 131 aa19.84■□□□□ 0.77
TVP23B-202ENST00000476139 MTMR6Q9Y217 621 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms