RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 WDR63Q8IWG1 891 aa14.66□□□□□ -0.06
NUDCD3-206ENST00000475952 ISCA1Q9BUE6 129 aa14.66□□□□□ -0.06
NUDCD3-206ENST00000475952 TMX4Q9H1E5 349 aaPredicted RBP14.66□□□□□ -0.06
NUDCD3-206ENST00000475952 PHAXQ9H814 394 aaKnown RBP14.66□□□□□ -0.06
NUDCD3-206ENST00000475952 SALL2Q9Y467 1007 aaPredicted RBP14.66□□□□□ -0.06
NUDCD3-206ENST00000475952 ZNF541Q9H0D2 1346 aa14.66□□□□□ -0.06
NUDCD3-206ENST00000475952 FANCIQ9NVI1 1328 aa14.66□□□□□ -0.06
NUDCD3-206ENST00000475952 GRIPAP1Q4V328 841 aa14.65□□□□□ -0.06
NUDCD3-206ENST00000475952 C3orf67Q6ZVT6 689 aa14.65□□□□□ -0.06
NUDCD3-206ENST00000475952 TSPYL6Q8N831 410 aa14.65□□□□□ -0.06
NUDCD3-206ENST00000475952 PDE4DIPQ5VU43 2346 aa14.65□□□□□ -0.06
NUDCD3-206ENST00000475952 LTBP1Q14766 1721 aa14.64□□□□□ -0.07
NUDCD3-206ENST00000475952 ATP5J2-PTCD1G3V325 749 aa14.64□□□□□ -0.07
NUDCD3-206ENST00000475952 HCLS1P14317 486 aaPredicted RBP14.64□□□□□ -0.07
NUDCD3-206ENST00000475952 EAPPQ56P03 285 aaPredicted RBP14.64□□□□□ -0.07
NUDCD3-206ENST00000475952 OLFM4Q6UX06 510 aa14.64□□□□□ -0.07
NUDCD3-206ENST00000475952 PSMD1Q99460 953 aa14.64□□□□□ -0.07
NUDCD3-206ENST00000475952 ABCC4O15439 1325 aa14.64□□□□□ -0.07
NUDCD3-206ENST00000475952 TRIM28Q13263 835 aaKnown RBP14.63□□□□□ -0.07
NUDCD3-206ENST00000475952 DDX46Q7L014 1031 aaKnown RBP14.63□□□□□ -0.07
NUDCD3-206ENST00000475952 ZNF277Q9NRM2 450 aaPredicted RBP14.63□□□□□ -0.07
NUDCD3-206ENST00000475952 WDR33Q9C0J8 1336 aaKnown RBP14.63□□□□□ -0.07
NUDCD3-206ENST00000475952 IARSP41252 1262 aaKnown RBP14.62□□□□□ -0.07
NUDCD3-206ENST00000475952 MAP2K1Q02750 393 aaPredicted RBP14.62□□□□□ -0.07
NUDCD3-206ENST00000475952 DEFB115Q30KQ5 88 aa14.62□□□□□ -0.07
NUDCD3-206ENST00000475952 MYD88Q99836 296 aa14.62□□□□□ -0.07
NUDCD3-206ENST00000475952 MYH16Q9H6N6 1097 aa14.62□□□□□ -0.07
NUDCD3-206ENST00000475952 HACL1Q9UJ83 578 aa14.62□□□□□ -0.07
NUDCD3-206ENST00000475952 CASP8AP2Q9UKL3 1982 aa14.62□□□□□ -0.07
NUDCD3-206ENST00000475952 TCERG1O14776 1098 aaKnown RBP14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 HSP90B1P14625 803 aaKnown RBP14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 EPHX2P34913 555 aa14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 RGS19P49795 217 aa14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 MLLT1Q03111 559 aaPredicted RBP14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 MAP1SQ66K74 1059 aaPredicted RBP14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 SYNE4Q8N205 404 aa14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 CCDC191Q8NCU4 936 aa14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 ZNF428Q96B54 188 aa14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 FAM89AQ96GI7 184 aa14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 PCDH10Q9P2E7 1040 aa14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 CLEC11AQ9Y240 323 aa14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 PSME4Q14997 1843 aa14.61□□□□□ -0.07
NUDCD3-206ENST00000475952 BBOX1O75936 387 aa14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 NEXNQ0ZGT2 675 aa14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 GRAPQ13588 217 aa14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 KSR2Q6VAB6 950 aa14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 TMC4Q7Z404 712 aa14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 CNTROBQ8N137 903 aa14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 ZBTB38Q8NAP3 1195 aaPredicted RBP14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 GRAPLQ8TC17 118 aaPredicted RBP14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 JDP2Q8WYK2 163 aa14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 METTL22Q9BUU2 404 aaPredicted RBP14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 CWC25Q9NXE8 425 aaPredicted RBP14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 MAP3K2Q9Y2U5 619 aa14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 ATP6V0A2Q9Y487 856 aa14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 COL4A5P29400 1685 aa14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 DUOX1Q9NRD9 1551 aa14.6□□□□□ -0.07
NUDCD3-206ENST00000475952 COL4A1P02462 1669 aa14.59□□□□□ -0.07
NUDCD3-206ENST00000475952 CCDC85CA6NKD9 419 aa14.59□□□□□ -0.07
NUDCD3-206ENST00000475952 IRS4O14654 1257 aaPredicted RBP14.59□□□□□ -0.07
NUDCD3-206ENST00000475952 SLC4A2P04920 1241 aa14.59□□□□□ -0.07
NUDCD3-206ENST00000475952 RTL5Q5HYW3 569 aaPredicted RBP14.59□□□□□ -0.07
NUDCD3-206ENST00000475952 ABT1Q9ULW3 272 aaKnown RBP14.59□□□□□ -0.07
NUDCD3-206ENST00000475952 A0A1B0GUL6 1792 aa14.58□□□□□ -0.08
NUDCD3-206ENST00000475952 PI4KAP2A4QPH2 592 aa14.58□□□□□ -0.08
NUDCD3-206ENST00000475952 EXOSC9Q06265 439 aaKnown RBP14.58□□□□□ -0.08
NUDCD3-206ENST00000475952 SF3B3Q15393 1217 aaKnown RBP14.58□□□□□ -0.08
NUDCD3-206ENST00000475952 PNMA8AQ86V59 439 aaPredicted RBP14.58□□□□□ -0.08
NUDCD3-206ENST00000475952 SP8Q8IXZ3 490 aa14.58□□□□□ -0.08
NUDCD3-206ENST00000475952 PI4KAP1Q8N8J0 262 aa14.58□□□□□ -0.08
NUDCD3-206ENST00000475952 SUPT20HQ8NEM7 779 aa14.58□□□□□ -0.08
NUDCD3-206ENST00000475952 PCCAP05165 728 aaPredicted RBP14.57□□□□□ -0.08
NUDCD3-206ENST00000475952 FLIIQ13045 1269 aa14.57□□□□□ -0.08
NUDCD3-206ENST00000475952 LARGE2Q8N3Y3 721 aa14.57□□□□□ -0.08
NUDCD3-206ENST00000475952 FZD9O00144 591 aa14.56□□□□□ -0.08
NUDCD3-206ENST00000475952 VAMP4O75379 141 aa14.56□□□□□ -0.08
NUDCD3-206ENST00000475952 EIF6P56537 245 aaKnown RBP14.56□□□□□ -0.08
NUDCD3-206ENST00000475952 FKBP5Q13451 457 aaPredicted RBP14.56□□□□□ -0.08
NUDCD3-206ENST00000475952 DPP8Q6V1X1 898 aaPredicted RBP14.56□□□□□ -0.08
NUDCD3-206ENST00000475952 G2E3Q7L622 706 aa14.56□□□□□ -0.08
NUDCD3-206ENST00000475952 MPNDQ8N594 471 aa14.56□□□□□ -0.08
NUDCD3-206ENST00000475952 CAPNS2Q96L46 248 aa14.56□□□□□ -0.08
NUDCD3-206ENST00000475952 VPS33BQ9H267 617 aa14.56□□□□□ -0.08
NUDCD3-206ENST00000475952 SPINK5Q9NQ38 1064 aaPredicted RBP14.56□□□□□ -0.08
NUDCD3-206ENST00000475952 CDHR2Q9BYE9 1310 aa14.56□□□□□ -0.08
NUDCD3-206ENST00000475952 CCER2I3L3R5 266 aa14.55□□□□□ -0.08
NUDCD3-206ENST00000475952 PPIP5K2O43314 1243 aa14.55□□□□□ -0.08
NUDCD3-206ENST00000475952 PDE8AO60658 829 aa14.55□□□□□ -0.08
NUDCD3-206ENST00000475952 FMR1Q06787 632 aaKnown RBP eCLIP14.55□□□□□ -0.08
NUDCD3-206ENST00000475952 CCDC152Q4G0S7 254 aa14.55□□□□□ -0.08
NUDCD3-206ENST00000475952 SLC51AQ86UW1 340 aa14.55□□□□□ -0.08
NUDCD3-206ENST00000475952 NIM1KQ8IY84 436 aa14.55□□□□□ -0.08
NUDCD3-206ENST00000475952 GPC2Q8N158 579 aa14.55□□□□□ -0.08
NUDCD3-206ENST00000475952 ZNF521Q96K83 1311 aa14.55□□□□□ -0.08
NUDCD3-206ENST00000475952 IGKV5-2P06315 115 aa14.54□□□□□ -0.08
NUDCD3-206ENST00000475952 AOC3Q16853 763 aa14.54□□□□□ -0.08
NUDCD3-206ENST00000475952 CYP4F22Q6NT55 531 aa14.54□□□□□ -0.08
NUDCD3-206ENST00000475952 CELF1Q92879 486 aaKnown RBP14.54□□□□□ -0.08
NUDCD3-206ENST00000475952 RTFDC1Q9BY42 306 aaPredicted RBP14.54□□□□□ -0.08
NUDCD3-206ENST00000475952 SCN9AQ15858 1988 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms