RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 DDX19BQ9UMR2 479 aa27.88■■■□□ 2.05
MCF2L2-209ENST00000475664 A0A0G2JLW4 131 aa27.87■■■□□ 2.05
MCF2L2-209ENST00000475664 KCNA3P22001 575 aa27.87■■■□□ 2.05
MCF2L2-209ENST00000475664 NPR1P16066 1061 aa27.86■■■□□ 2.05
MCF2L2-209ENST00000475664 TTLL11Q8NHH1 800 aa27.86■■■□□ 2.05
MCF2L2-209ENST00000475664 CACNA1SQ13698 1873 aa27.86■■■□□ 2.05
MCF2L2-209ENST00000475664 CSF1RP07333 972 aa27.85■■■□□ 2.05
MCF2L2-209ENST00000475664 HOXA10P31260 410 aaPredicted RBP27.85■■■□□ 2.05
MCF2L2-209ENST00000475664 STYK1Q6J9G0 422 aa27.85■■■□□ 2.05
MCF2L2-209ENST00000475664 MASTLQ96GX5 879 aa27.85■■■□□ 2.05
MCF2L2-209ENST00000475664 TAF1P21675 1872 aa27.85■■■□□ 2.05
MCF2L2-209ENST00000475664 RABL6Q3YEC7 729 aaPredicted RBP27.84■■■□□ 2.05
MCF2L2-209ENST00000475664 RPGRQ92834 1020 aaKnown RBP27.84■■■□□ 2.05
MCF2L2-209ENST00000475664 BICC1Q9H694 974 aaKnown RBP27.84■■■□□ 2.05
MCF2L2-209ENST00000475664 HDAC5Q9UQL6 1122 aa27.84■■■□□ 2.05
MCF2L2-209ENST00000475664 LRRFIP2Q9Y608 721 aaKnown RBP27.84■■■□□ 2.05
MCF2L2-209ENST00000475664 RTL9Q8NET4 1388 aa27.84■■■□□ 2.05
MCF2L2-209ENST00000475664 CCDC152Q4G0S7 254 aa27.83■■■□□ 2.05
MCF2L2-209ENST00000475664 ANKRD44Q8N8A2 993 aa27.83■■■□□ 2.05
MCF2L2-209ENST00000475664 COL4A1P02462 1669 aa27.82■■■□□ 2.04
MCF2L2-209ENST00000475664 GNAI2P04899 355 aa27.81■■■□□ 2.04
MCF2L2-209ENST00000475664 LMBR1LQ6UX01 489 aa27.81■■■□□ 2.04
MCF2L2-209ENST00000475664 ZNF622Q969S3 477 aaKnown RBP eCLIP27.81■■■□□ 2.04
MCF2L2-209ENST00000475664 RBM17Q96I25 401 aaKnown RBP27.81■■■□□ 2.04
MCF2L2-209ENST00000475664 CCDC85AQ96PX6 553 aaPredicted RBP27.81■■■□□ 2.04
MCF2L2-209ENST00000475664 CRAMP1Q96RY5 1269 aa27.81■■■□□ 2.04
MCF2L2-209ENST00000475664 GREM2Q9H772 168 aa27.81■■■□□ 2.04
MCF2L2-209ENST00000475664 SLX4Q8IY92 1834 aa27.81■■■□□ 2.04
MCF2L2-209ENST00000475664 FAM161AQ3B820 660 aa27.8■■■□□ 2.04
MCF2L2-209ENST00000475664 CRBNQ96SW2 442 aa27.8■■■□□ 2.04
MCF2L2-209ENST00000475664 ZBTB40Q9NUA8 1239 aa27.8■■■□□ 2.04
MCF2L2-209ENST00000475664 PIM2Q9P1W9 311 aa27.8■■■□□ 2.04
MCF2L2-209ENST00000475664 DDX46Q7L014 1031 aaKnown RBP27.79■■■□□ 2.04
MCF2L2-209ENST00000475664 CNKSR1Q969H4 720 aa27.79■■■□□ 2.04
MCF2L2-209ENST00000475664 CHMP4BQ9H444 224 aaKnown RBP27.79■■■□□ 2.04
MCF2L2-209ENST00000475664 SEC31BQ9NQW1 1179 aa27.78■■■□□ 2.04
MCF2L2-209ENST00000475664 ARFGEF1Q9Y6D6 1849 aa27.78■■■□□ 2.04
MCF2L2-209ENST00000475664 SPEF2Q9C093 1822 aa27.77■■■□□ 2.04
MCF2L2-209ENST00000475664 ALDH1B1P30837 517 aa27.77■■■□□ 2.04
MCF2L2-209ENST00000475664 TTLL6Q8N841 843 aa27.77■■■□□ 2.04
MCF2L2-209ENST00000475664 C1orf115Q9H7X2 142 aa27.77■■■□□ 2.04
MCF2L2-209ENST00000475664 GRAPQ13588 217 aa27.76■■■□□ 2.03
MCF2L2-209ENST00000475664 GRAPLQ8TC17 118 aaPredicted RBP27.76■■■□□ 2.03
MCF2L2-209ENST00000475664 CHMP3Q9Y3E7 222 aa27.76■■■□□ 2.03
MCF2L2-209ENST00000475664 ITGA6P23229 1130 aa27.75■■■□□ 2.03
MCF2L2-209ENST00000475664 MTX1Q13505 466 aa27.75■■■□□ 2.03
MCF2L2-209ENST00000475664 PRPF40BQ6NWY9 871 aaKnown RBP27.75■■■□□ 2.03
MCF2L2-209ENST00000475664 CELF1Q92879 486 aaKnown RBP27.75■■■□□ 2.03
MCF2L2-209ENST00000475664 DALRD3Q5D0E6 543 aaKnown RBP27.74■■■□□ 2.03
MCF2L2-209ENST00000475664 WWC3Q9ULE0 1092 aa27.74■■■□□ 2.03
MCF2L2-209ENST00000475664 LRRC37AA6NMS7 1700 aa27.73■■■□□ 2.03
MCF2L2-209ENST00000475664 IFIT5Q13325 482 aaKnown RBP27.73■■■□□ 2.03
MCF2L2-209ENST00000475664 CDC5LQ99459 802 aaKnown RBP27.73■■■□□ 2.03
MCF2L2-209ENST00000475664 ANKRD18BA2A2Z9 1011 aa27.72■■■□□ 2.03
MCF2L2-209ENST00000475664 CCDC57Q2TAC2 916 aa27.72■■■□□ 2.03
MCF2L2-209ENST00000475664 BBOX1O75936 387 aa27.71■■■□□ 2.03
MCF2L2-209ENST00000475664 RPS8P62241 208 aaKnown RBP27.71■■■□□ 2.03
MCF2L2-209ENST00000475664 IRX6P78412 446 aaPredicted RBP27.71■■■□□ 2.03
MCF2L2-209ENST00000475664 BCS1LQ9Y276 419 aa27.71■■■□□ 2.03
MCF2L2-209ENST00000475664 PPEF1O14829 653 aaPredicted RBP27.7■■■□□ 2.02
MCF2L2-209ENST00000475664 RFX5P48382 616 aaPredicted RBP27.7■■■□□ 2.02
MCF2L2-209ENST00000475664 ANKRD18AQ8IVF6 992 aa27.7■■■□□ 2.02
MCF2L2-209ENST00000475664 CEP85Q6P2H3 762 aa27.69■■■□□ 2.02
MCF2L2-209ENST00000475664 EXOC6Q8TAG9 804 aa27.69■■■□□ 2.02
MCF2L2-209ENST00000475664 C7orf43Q8WVR3 580 aa27.69■■■□□ 2.02
MCF2L2-209ENST00000475664 PNMA6EA0A0J9YXQ4 647 aa27.68■■■□□ 2.02
MCF2L2-209ENST00000475664 SRGAP3O43295 1099 aa27.68■■■□□ 2.02
MCF2L2-209ENST00000475664 TMC4Q7Z404 712 aa27.68■■■□□ 2.02
MCF2L2-209ENST00000475664 ATP8B2P98198 1209 aa27.67■■■□□ 2.02
MCF2L2-209ENST00000475664 SLC51AQ86UW1 340 aa27.67■■■□□ 2.02
MCF2L2-209ENST00000475664 ZNF594Q96JF6 807 aaPredicted RBP27.67■■■□□ 2.02
MCF2L2-209ENST00000475664 ATP6V0A2Q9Y487 856 aa27.67■■■□□ 2.02
MCF2L2-209ENST00000475664 YBX3P16989 372 aaKnown RBP eCLIP27.66■■■□□ 2.02
MCF2L2-209ENST00000475664 IGHMBP2P38935 993 aaKnown RBP27.66■■■□□ 2.02
MCF2L2-209ENST00000475664 A0A1B0GUL6 1792 aa27.65■■■□□ 2.02
MCF2L2-209ENST00000475664 C21orf2O43822 256 aa27.65■■■□□ 2.02
MCF2L2-209ENST00000475664 POLA2Q14181 598 aa27.65■■■□□ 2.02
MCF2L2-209ENST00000475664 TAF7LQ5H9L4 462 aa27.65■■■□□ 2.02
MCF2L2-209ENST00000475664 SP8Q8IXZ3 490 aa27.65■■■□□ 2.02
MCF2L2-209ENST00000475664 SSH3Q8TE77 659 aa27.65■■■□□ 2.02
MCF2L2-209ENST00000475664 BSDC1Q9NW68 430 aaPredicted RBP27.65■■■□□ 2.02
MCF2L2-209ENST00000475664 SNED1Q8TER0 1413 aa27.65■■■□□ 2.02
MCF2L2-209ENST00000475664 FER1L6Q2WGJ9 1857 aa27.64■■■□□ 2.02
MCF2L2-209ENST00000475664 PTPN12Q05209 780 aaKnown RBP27.64■■■□□ 2.02
MCF2L2-209ENST00000475664 AAMPQ13685 434 aa27.64■■■□□ 2.02
MCF2L2-209ENST00000475664 OLFM4Q6UX06 510 aa27.64■■■□□ 2.02
MCF2L2-209ENST00000475664 RPAP2Q8IXW5 612 aaPredicted RBP27.64■■■□□ 2.02
MCF2L2-209ENST00000475664 KLHDC4Q8TBB5 520 aa27.64■■■□□ 2.02
MCF2L2-209ENST00000475664 ZNF219Q9P2Y4 722 aaPredicted RBP27.64■■■□□ 2.02
MCF2L2-209ENST00000475664 LTBP1Q14766 1721 aa27.64■■■□□ 2.01
MCF2L2-209ENST00000475664 PELP1Q8IZL8 1130 aaKnown RBP27.63■■■□□ 2.01
MCF2L2-209ENST00000475664 MPHOSPH8Q99549 860 aa27.63■■■□□ 2.01
MCF2L2-209ENST00000475664 CC2D2BQ6DHV5 1058 aa27.62■■■□□ 2.01
MCF2L2-209ENST00000475664 SIRT2Q8IXJ6 389 aa27.62■■■□□ 2.01
MCF2L2-209ENST00000475664 COPRSQ9NQ92 184 aa27.62■■■□□ 2.01
MCF2L2-209ENST00000475664 SOGA3Q5TF21 947 aa27.61■■■□□ 2.01
MCF2L2-209ENST00000475664 LDHAL6AQ6ZMR3 332 aa27.61■■■□□ 2.01
MCF2L2-209ENST00000475664 PA2G4Q9UQ80 394 aaKnown RBP27.61■■■□□ 2.01
MCF2L2-209ENST00000475664 PCDHB15Q9Y5E8 787 aa27.61■■■□□ 2.01
MCF2L2-209ENST00000475664 GPR162Q16538 588 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms