RNA–Protein interactions for RNA: ENST00000475495.1

TRAIP-205, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-205ENST00000475495 CNKSR1Q969H4 720 aa12.8□□□□□ -0.36
TRAIP-205ENST00000475495 SRCIN1Q9C0H9 1055 aa12.8□□□□□ -0.36
TRAIP-205ENST00000475495 CACNA1SQ13698 1873 aa12.8□□□□□ -0.36
TRAIP-205ENST00000475495 DDX60Q8IY21 1712 aaKnown RBP12.79□□□□□ -0.36
TRAIP-205ENST00000475495 H7C1W4 665 aa12.79□□□□□ -0.36
TRAIP-205ENST00000475495 GRIN3BO60391 1043 aa12.79□□□□□ -0.36
TRAIP-205ENST00000475495 ALDH1B1P30837 517 aa12.79□□□□□ -0.36
TRAIP-205ENST00000475495 RTL5Q5HYW3 569 aaPredicted RBP12.79□□□□□ -0.36
TRAIP-205ENST00000475495 RPGRQ92834 1020 aaKnown RBP12.79□□□□□ -0.36
TRAIP-205ENST00000475495 BCS1LQ9Y276 419 aa12.79□□□□□ -0.36
TRAIP-205ENST00000475495 CDHR2Q9BYE9 1310 aa12.79□□□□□ -0.36
TRAIP-205ENST00000475495 TNRC6CQ9HCJ0 1690 aaKnown RBP12.79□□□□□ -0.36
TRAIP-205ENST00000475495 PDE8AO60658 829 aa12.78□□□□□ -0.36
TRAIP-205ENST00000475495 B4GALNT3Q6L9W6 998 aa12.78□□□□□ -0.36
TRAIP-205ENST00000475495 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-205ENST00000475495 FRAT1Q92837 279 aaPredicted RBP12.78□□□□□ -0.36
TRAIP-205ENST00000475495 RBM17Q96I25 401 aaKnown RBP12.78□□□□□ -0.36
TRAIP-205ENST00000475495 SLX4Q8IY92 1834 aa12.78□□□□□ -0.36
TRAIP-205ENST00000475495 YBX3P16989 372 aaKnown RBP eCLIP12.77□□□□□ -0.37
TRAIP-205ENST00000475495 HOXA10P31260 410 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-205ENST00000475495 CCT4P50991 539 aaKnown RBP12.77□□□□□ -0.37
TRAIP-205ENST00000475495 SF3B3Q15393 1217 aaKnown RBP12.77□□□□□ -0.37
TRAIP-205ENST00000475495 ZKSCAN2Q63HK3 967 aa12.77□□□□□ -0.37
TRAIP-205ENST00000475495 ATF7IPQ6VMQ6 1270 aa12.77□□□□□ -0.37
TRAIP-205ENST00000475495 UBE3BQ7Z3V4 1068 aa12.77□□□□□ -0.37
TRAIP-205ENST00000475495 CRAMP1Q96RY5 1269 aa12.77□□□□□ -0.37
TRAIP-205ENST00000475495 C9orf78Q9NZ63 289 aaPredicted RBP12.77□□□□□ -0.37
TRAIP-205ENST00000475495 WWC3Q9ULE0 1092 aa12.77□□□□□ -0.37
TRAIP-205ENST00000475495 GRM8O00222 908 aa12.76□□□□□ -0.37
TRAIP-205ENST00000475495 C3orf67Q6ZVT6 689 aa12.76□□□□□ -0.37
TRAIP-205ENST00000475495 DDX46Q7L014 1031 aaKnown RBP12.76□□□□□ -0.37
TRAIP-205ENST00000475495 JARID2Q92833 1246 aaPredicted RBP12.76□□□□□ -0.37
TRAIP-205ENST00000475495 TRIM27P14373 513 aa12.75□□□□□ -0.37
TRAIP-205ENST00000475495 TAF1P21675 1872 aa12.75□□□□□ -0.37
TRAIP-205ENST00000475495 CASP7P55210 303 aa12.75□□□□□ -0.37
TRAIP-205ENST00000475495 CCDC152Q4G0S7 254 aa12.75□□□□□ -0.37
TRAIP-205ENST00000475495 PRPF40BQ6NWY9 871 aaKnown RBP12.75□□□□□ -0.37
TRAIP-205ENST00000475495 PLA2G12BQ9BX93 195 aa12.75□□□□□ -0.37
TRAIP-205ENST00000475495 UTYO14607 1347 aa12.74□□□□□ -0.37
TRAIP-205ENST00000475495 ABCC4O15439 1325 aa12.74□□□□□ -0.37
TRAIP-205ENST00000475495 SOGA3Q5TF21 947 aa12.74□□□□□ -0.37
TRAIP-205ENST00000475495 INTS3Q68E01 1043 aaKnown RBP12.74□□□□□ -0.37
TRAIP-205ENST00000475495 BBOX1O75936 387 aa12.73□□□□□ -0.37
TRAIP-205ENST00000475495 MS4A1P11836 297 aa12.73□□□□□ -0.37
TRAIP-205ENST00000475495 CTSWP56202 376 aa12.73□□□□□ -0.37
TRAIP-205ENST00000475495 FTSJ3Q8IY81 847 aaKnown RBP12.73□□□□□ -0.37
TRAIP-205ENST00000475495 TMX4Q9H1E5 349 aaPredicted RBP12.73□□□□□ -0.37
TRAIP-205ENST00000475495 HDAC5Q9UQL6 1122 aa12.73□□□□□ -0.37
TRAIP-205ENST00000475495 C21orf2O43822 256 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 GRAPQ13588 217 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 GRIPAP1Q4V328 841 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 CC2D2BQ6DHV5 1058 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 ARHGAP27Q6ZUM4 889 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 TMC4Q7Z404 712 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 DZIP1LQ8IYY4 767 aaKnown RBP12.72□□□□□ -0.37
TRAIP-205ENST00000475495 TTLL11Q8NHH1 800 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 GRAPLQ8TC17 118 aaPredicted RBP12.72□□□□□ -0.37
TRAIP-205ENST00000475495 C7orf43Q8WVR3 580 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 CLUAP1Q96AJ1 413 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 USP44Q9H0E7 712 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 SBF1O95248 1867 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 FER1L6Q2WGJ9 1857 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 CCDC88AQ3V6T2 1871 aa12.72□□□□□ -0.37
TRAIP-205ENST00000475495 PPEF1O14829 653 aaPredicted RBP12.71□□□□□ -0.37
TRAIP-205ENST00000475495 CSF1RP07333 972 aa12.71□□□□□ -0.37
TRAIP-205ENST00000475495 NBPF7P0C2Y1 421 aaPredicted RBP12.71□□□□□ -0.37
TRAIP-205ENST00000475495 RTL9Q8NET4 1388 aa12.7□□□□□ -0.38
TRAIP-205ENST00000475495 UBTFL1P0CB47 393 aaPredicted RBP12.7□□□□□ -0.38
TRAIP-205ENST00000475495 RPS8P62241 208 aaKnown RBP12.7□□□□□ -0.38
TRAIP-205ENST00000475495 FOXO4P98177 505 aa12.7□□□□□ -0.38
TRAIP-205ENST00000475495 CCDC93Q567U6 631 aa12.7□□□□□ -0.38
TRAIP-205ENST00000475495 RTKN2Q8IZC4 609 aa12.7□□□□□ -0.38
TRAIP-205ENST00000475495 CDC5LQ99459 802 aaKnown RBP12.7□□□□□ -0.38
TRAIP-205ENST00000475495 GNAI3P08754 354 aa12.69□□□□□ -0.38
TRAIP-205ENST00000475495 YY1P25490 414 aa12.69□□□□□ -0.38
TRAIP-205ENST00000475495 LMBR1LQ6UX01 489 aa12.69□□□□□ -0.38
TRAIP-205ENST00000475495 ANKRD18AQ8IVF6 992 aa12.69□□□□□ -0.38
TRAIP-205ENST00000475495 SP8Q8IXZ3 490 aa12.69□□□□□ -0.38
TRAIP-205ENST00000475495 TMEM57Q8N5G2 664 aa12.69□□□□□ -0.38
TRAIP-205ENST00000475495 SUCLG2Q96I99 432 aa12.69□□□□□ -0.38
TRAIP-205ENST00000475495 CCDC85AQ96PX6 553 aaPredicted RBP12.69□□□□□ -0.38
TRAIP-205ENST00000475495 GREM2Q9H772 168 aa12.69□□□□□ -0.38
TRAIP-205ENST00000475495 SEC31BQ9NQW1 1179 aa12.69□□□□□ -0.38
TRAIP-205ENST00000475495 TNNQ9UQP3 1299 aa12.69□□□□□ -0.38
TRAIP-205ENST00000475495 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
TRAIP-205ENST00000475495 ITGA6P23229 1130 aa12.68□□□□□ -0.38
TRAIP-205ENST00000475495 IFIT5Q13325 482 aaKnown RBP12.68□□□□□ -0.38
TRAIP-205ENST00000475495 CELF1Q92879 486 aaKnown RBP12.68□□□□□ -0.38
TRAIP-205ENST00000475495 CHMP3Q9Y3E7 222 aa12.68□□□□□ -0.38
TRAIP-205ENST00000475495 DICER1Q9UPY3 1922 aaKnown RBP12.68□□□□□ -0.38
TRAIP-205ENST00000475495 SPEF2Q9C093 1822 aa12.67□□□□□ -0.38
TRAIP-205ENST00000475495 LTBP3Q9NS15 1303 aa12.67□□□□□ -0.38
TRAIP-205ENST00000475495 ANKRD18BA2A2Z9 1011 aa12.67□□□□□ -0.38
TRAIP-205ENST00000475495 RLBP1P12271 317 aa12.67□□□□□ -0.38
TRAIP-205ENST00000475495 IGHMBP2P38935 993 aaKnown RBP12.67□□□□□ -0.38
TRAIP-205ENST00000475495 CCDC57Q2TAC2 916 aa12.67□□□□□ -0.38
TRAIP-205ENST00000475495 FAM161AQ3B820 660 aa12.67□□□□□ -0.38
TRAIP-205ENST00000475495 RABL6Q3YEC7 729 aaPredicted RBP12.67□□□□□ -0.38
TRAIP-205ENST00000475495 EPHA10Q5JZY3 1008 aa12.67□□□□□ -0.38
TRAIP-205ENST00000475495 ITPRIPQ8IWB1 547 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms