RNA–Protein interactions for RNA: ENST00000475432.6

HIF3A-207, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-207ENST00000475432 ATG9AQ7Z3C6 839 aa22.19■■□□□ 1.14
HIF3A-207ENST00000475432 EYA2O00167 538 aa22.19■■□□□ 1.14
HIF3A-207ENST00000475432 ITGA6P23229 1130 aa22.19■■□□□ 1.14
HIF3A-207ENST00000475432 AACSQ86V21 672 aa22.19■■□□□ 1.14
HIF3A-207ENST00000475432 AOX1Q06278 1338 aa22.19■■□□□ 1.14
HIF3A-207ENST00000475432 C4AP0C0L4 1744 aa22.18■■□□□ 1.14
HIF3A-207ENST00000475432 TFCP2Q12800 502 aa22.18■■□□□ 1.14
HIF3A-207ENST00000475432 EAF2Q96CJ1 260 aaPredicted RBP22.18■■□□□ 1.14
HIF3A-207ENST00000475432 TNS1Q9HBL0 1735 aaKnown RBP22.18■■□□□ 1.14
HIF3A-207ENST00000475432 UBR3Q6ZT12 1888 aa22.18■■□□□ 1.14
HIF3A-207ENST00000475432 CIAO1O76071 339 aa22.18■■□□□ 1.14
HIF3A-207ENST00000475432 IFIT2P09913 472 aaKnown RBP22.18■■□□□ 1.14
HIF3A-207ENST00000475432 IL15P40933 162 aaPredicted RBP22.18■■□□□ 1.14
HIF3A-207ENST00000475432 LRRC24Q50LG9 513 aa22.18■■□□□ 1.14
HIF3A-207ENST00000475432 ZNF827Q17R98 1081 aa22.17■■□□□ 1.14
HIF3A-207ENST00000475432 ERFEQ4G0M1 354 aa22.17■■□□□ 1.14
HIF3A-207ENST00000475432 ANKRD18BA2A2Z9 1011 aa22.16■■□□□ 1.14
HIF3A-207ENST00000475432 SEC24BO95487 1268 aa22.16■■□□□ 1.14
HIF3A-207ENST00000475432 TAF7LQ5H9L4 462 aa22.16■■□□□ 1.14
HIF3A-207ENST00000475432 AKT1S1Q96B36 256 aa22.16■■□□□ 1.14
HIF3A-207ENST00000475432 PUS3Q9BZE2 481 aaKnown RBP22.16■■□□□ 1.14
HIF3A-207ENST00000475432 NYXQ9GZU5 481 aa22.16■■□□□ 1.14
HIF3A-207ENST00000475432 FBXO3Q9UK99 471 aa22.16■■□□□ 1.14
HIF3A-207ENST00000475432 SDSP20132 328 aa22.16■■□□□ 1.14
HIF3A-207ENST00000475432 NBPF5PQ86XG9 351 aaPredicted RBP22.16■■□□□ 1.14
HIF3A-207ENST00000475432 TFCP2L1Q9NZI6 479 aa22.16■■□□□ 1.14
HIF3A-207ENST00000475432 TTC41PQ6P2S7 1318 aa22.15■■□□□ 1.14
HIF3A-207ENST00000475432 PI4K2BQ8TCG2 481 aa22.15■■□□□ 1.14
HIF3A-207ENST00000475432 GYS1P13807 737 aa22.14■■□□□ 1.14
HIF3A-207ENST00000475432 GTF2E1P29083 439 aaPredicted RBP22.14■■□□□ 1.14
HIF3A-207ENST00000475432 TNNI3KQ59H18 835 aa22.14■■□□□ 1.14
HIF3A-207ENST00000475432 CCDC8Q9H0W5 538 aaPredicted RBP22.14■■□□□ 1.14
HIF3A-207ENST00000475432 FPGT-TNNI3KV9GXZ4 949 aa22.14■■□□□ 1.14
HIF3A-207ENST00000475432 NFIXQ14938 502 aa22.14■■□□□ 1.13
HIF3A-207ENST00000475432 CCDC152Q4G0S7 254 aa22.13■■□□□ 1.13
HIF3A-207ENST00000475432 TPTE2Q6XPS3 522 aa22.13■■□□□ 1.13
HIF3A-207ENST00000475432 GPATCH3Q96I76 525 aa22.13■■□□□ 1.13
HIF3A-207ENST00000475432 ECHDC1Q9NTX5 307 aa22.13■■□□□ 1.13
HIF3A-207ENST00000475432 TLR7Q9NYK1 1049 aaKnown RBP22.13■■□□□ 1.13
HIF3A-207ENST00000475432 CDC45O75419 566 aa22.13■■□□□ 1.13
HIF3A-207ENST00000475432 SLC10A5Q5PT55 438 aa22.13■■□□□ 1.13
HIF3A-207ENST00000475432 CARMIL3Q8ND23 1372 aa22.12■■□□□ 1.13
HIF3A-207ENST00000475432 COL24A1Q17RW2 1714 aa22.12■■□□□ 1.13
HIF3A-207ENST00000475432 DDX60Q8IY21 1712 aaKnown RBP22.12■■□□□ 1.13
HIF3A-207ENST00000475432 LDHAL6AQ6ZMR3 332 aa22.12■■□□□ 1.13
HIF3A-207ENST00000475432 TBC1D9Q6ZT07 1266 aa22.12■■□□□ 1.13
HIF3A-207ENST00000475432 RGPD3A6NKT7 1758 aaPredicted RBP22.12■■□□□ 1.13
HIF3A-207ENST00000475432 RGPD4Q7Z3J3 1758 aa22.12■■□□□ 1.13
HIF3A-207ENST00000475432 ABCC12Q96J65 1359 aa22.12■■□□□ 1.13
HIF3A-207ENST00000475432 CAMKK2Q96RR4 588 aa22.11■■□□□ 1.13
HIF3A-207ENST00000475432 GPR108Q9NPR9 543 aa22.11■■□□□ 1.13
HIF3A-207ENST00000475432 MYH3P11055 1940 aa22.11■■□□□ 1.13
HIF3A-207ENST00000475432 RTL9Q8NET4 1388 aa22.11■■□□□ 1.13
HIF3A-207ENST00000475432 ERC2O15083 957 aa22.11■■□□□ 1.13
HIF3A-207ENST00000475432 GLRX3O76003 335 aaKnown RBP22.11■■□□□ 1.13
HIF3A-207ENST00000475432 EN1Q05925 392 aaPredicted RBP22.11■■□□□ 1.13
HIF3A-207ENST00000475432 CEP126Q9P2H0 1117 aa22.11■■□□□ 1.13
HIF3A-207ENST00000475432 RIPOR2Q9Y4F9 1068 aa22.11■■□□□ 1.13
HIF3A-207ENST00000475432 EZH2Q15910 746 aaKnown RBP22.1■■□□□ 1.13
HIF3A-207ENST00000475432 C3orf67Q6ZVT6 689 aa22.1■■□□□ 1.13
HIF3A-207ENST00000475432 SEC31BQ9NQW1 1179 aa22.1■■□□□ 1.13
HIF3A-207ENST00000475432 DBNLQ9UJU6 430 aaKnown RBP22.1■■□□□ 1.13
HIF3A-207ENST00000475432 LAMB2P55268 1798 aa22.1■■□□□ 1.13
HIF3A-207ENST00000475432 SF3B3Q15393 1217 aaKnown RBP22.09■■□□□ 1.13
HIF3A-207ENST00000475432 TRIM6-TRIM34B2RNG4 842 aa22.09■■□□□ 1.13
HIF3A-207ENST00000475432 CNNM1Q9NRU3 951 aa22.09■■□□□ 1.13
HIF3A-207ENST00000475432 COL23A1Q86Y22 540 aaPredicted RBP22.08■■□□□ 1.13
HIF3A-207ENST00000475432 TM4SF1P30408 202 aa22.07■■□□□ 1.12
HIF3A-207ENST00000475432 FLAD1Q8NFF5 587 aa22.07■■□□□ 1.12
HIF3A-207ENST00000475432 RILPL2Q969X0 211 aa22.07■■□□□ 1.12
HIF3A-207ENST00000475432 NPHP1O15259 732 aa22.07■■□□□ 1.12
HIF3A-207ENST00000475432 CCDC24Q8N4L8 307 aa22.07■■□□□ 1.12
HIF3A-207ENST00000475432 DBNDD2Q9BQY9 259 aa22.07■■□□□ 1.12
HIF3A-207ENST00000475432 RIC1Q4ADV7 1423 aa22.07■■□□□ 1.12
HIF3A-207ENST00000475432 LRP5O75197 1615 aa22.06■■□□□ 1.12
HIF3A-207ENST00000475432 TIMM10P62072 90 aa22.06■■□□□ 1.12
HIF3A-207ENST00000475432 METTL24Q5JXM2 366 aa22.06■■□□□ 1.12
HIF3A-207ENST00000475432 ILDR1Q86SU0 546 aaPredicted RBP22.06■■□□□ 1.12
HIF3A-207ENST00000475432 CNBD1Q8NA66 436 aa22.06■■□□□ 1.12
HIF3A-207ENST00000475432 NLRP3Q96P20 1036 aa22.06■■□□□ 1.12
HIF3A-207ENST00000475432 ZNF609O15014 1411 aa22.06■■□□□ 1.12
HIF3A-207ENST00000475432 MAP4K4O95819 1239 aaPredicted RBP22.06■■□□□ 1.12
HIF3A-207ENST00000475432 MFAP1P55081 439 aaKnown RBP22.06■■□□□ 1.12
HIF3A-207ENST00000475432 SF3B2Q13435 895 aaKnown RBP22.06■■□□□ 1.12
HIF3A-207ENST00000475432 NEUROD6Q96NK8 337 aa22.06■■□□□ 1.12
HIF3A-207ENST00000475432 UPF2Q9HAU5 1272 aaKnown RBP22.06■■□□□ 1.12
HIF3A-207ENST00000475432 AKAP2Q9Y2D5 859 aa22.06■■□□□ 1.12
HIF3A-207ENST00000475432 A0A1B0GUL7 405 aa22.05■■□□□ 1.12
HIF3A-207ENST00000475432 MSH5O43196 834 aa22.05■■□□□ 1.12
HIF3A-207ENST00000475432 MPHOSPH8Q99549 860 aa22.05■■□□□ 1.12
HIF3A-207ENST00000475432 PNPLA7Q6ZV29 1317 aa22.05■■□□□ 1.12
HIF3A-207ENST00000475432 CASC1Q6TDU7 716 aa22.04■■□□□ 1.12
HIF3A-207ENST00000475432 IGHMBP2P38935 993 aaKnown RBP22.04■■□□□ 1.12
HIF3A-207ENST00000475432 PRR5LQ6MZQ0 368 aa22.04■■□□□ 1.12
HIF3A-207ENST00000475432 VGLL2Q8N8G2 317 aa22.04■■□□□ 1.12
HIF3A-207ENST00000475432 CDC5LQ99459 802 aaKnown RBP22.04■■□□□ 1.12
HIF3A-207ENST00000475432 ANO8Q9HCE9 1232 aaPredicted RBP22.04■■□□□ 1.12
HIF3A-207ENST00000475432 SERPINB2P05120 415 aa22.03■■□□□ 1.12
HIF3A-207ENST00000475432 BAG6P46379 1132 aa22.03■■□□□ 1.12
HIF3A-207ENST00000475432 CNTROBQ8N137 903 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms