RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 ATXN7L1Q9ULK2 861 aaPredicted RBP6.99□□□□□ -1.29
SDHB-204ENST00000475049 SASH3O75995 380 aa6.98□□□□□ -1.29
SDHB-204ENST00000475049 P4HBP07237 508 aaKnown RBP6.98□□□□□ -1.29
SDHB-204ENST00000475049 FGFR3P22607 806 aa6.98□□□□□ -1.29
SDHB-204ENST00000475049 GRNP28799 593 aaKnown RBP6.98□□□□□ -1.29
SDHB-204ENST00000475049 KCNQ4P56696 695 aa6.98□□□□□ -1.29
SDHB-204ENST00000475049 CCINQ13939 588 aa6.98□□□□□ -1.29
SDHB-204ENST00000475049 PDE12Q6L8Q7 609 aaKnown RBP6.98□□□□□ -1.29
SDHB-204ENST00000475049 SVOPQ8N4V2 548 aa6.98□□□□□ -1.29
SDHB-204ENST00000475049 ELP3Q9H9T3 547 aa6.98□□□□□ -1.29
SDHB-204ENST00000475049 STRN4Q9NRL3 753 aa6.98□□□□□ -1.29
SDHB-204ENST00000475049 AMOTL2Q9Y2J4 779 aa6.98□□□□□ -1.29
SDHB-204ENST00000475049 SPEM2Q0P670 501 aa6.97□□□□□ -1.29
SDHB-204ENST00000475049 ZNF326Q5BKZ1 582 aaKnown RBP6.97□□□□□ -1.29
SDHB-204ENST00000475049 TTC39BQ5VTQ0 682 aaPredicted RBP6.97□□□□□ -1.29
SDHB-204ENST00000475049 LYPD4Q6UWN0 246 aa6.97□□□□□ -1.29
SDHB-204ENST00000475049 NPM2Q86SE8 214 aaKnown RBP6.97□□□□□ -1.29
SDHB-204ENST00000475049 CFHR5Q9BXR6 569 aa6.97□□□□□ -1.29
SDHB-204ENST00000475049 NDFIP2Q9NV92 336 aa6.97□□□□□ -1.29
SDHB-204ENST00000475049 PRR12Q9ULL5 1215 aa6.97□□□□□ -1.29
SDHB-204ENST00000475049 PHACTR2O75167 634 aa6.96□□□□□ -1.3
SDHB-204ENST00000475049 TARSP26639 723 aaKnown RBP6.96□□□□□ -1.3
SDHB-204ENST00000475049 ATP2B2Q01814 1243 aa6.96□□□□□ -1.3
SDHB-204ENST00000475049 ORC1Q13415 861 aa6.96□□□□□ -1.3
SDHB-204ENST00000475049 NEUROD1Q13562 356 aa6.96□□□□□ -1.3
SDHB-204ENST00000475049 DSC3Q14574 896 aa6.96□□□□□ -1.3
SDHB-204ENST00000475049 GRIN2CQ14957 1233 aa6.96□□□□□ -1.3
SDHB-204ENST00000475049 RAB44Q7Z6P3 723 aaPredicted RBP6.96□□□□□ -1.3
SDHB-204ENST00000475049 NLRP13Q86W25 1043 aa6.96□□□□□ -1.3
SDHB-204ENST00000475049 BHMTQ93088 406 aa6.96□□□□□ -1.3
SDHB-204ENST00000475049 ZNF428Q96B54 188 aa6.96□□□□□ -1.3
SDHB-204ENST00000475049 ALKBH8Q96BT7 664 aaKnown RBP6.96□□□□□ -1.3
SDHB-204ENST00000475049 GSX2Q9BZM3 304 aa6.96□□□□□ -1.3
SDHB-204ENST00000475049 C11orf16Q9NQ32 467 aa6.96□□□□□ -1.3
SDHB-204ENST00000475049 MBIPQ9NS73 344 aa6.96□□□□□ -1.3
SDHB-204ENST00000475049 ABI2Q9NYB9 513 aaPredicted RBP6.96□□□□□ -1.3
SDHB-204ENST00000475049 PNMA6FA0A0J9YX94 578 aa6.95□□□□□ -1.3
SDHB-204ENST00000475049 TNFRSF21O75509 655 aa6.95□□□□□ -1.3
SDHB-204ENST00000475049 EGFRP00533 1210 aa6.95□□□□□ -1.3
SDHB-204ENST00000475049 IGHA2P01877 340 aa6.95□□□□□ -1.3
SDHB-204ENST00000475049 LDHBP07195 334 aaKnown RBP6.95□□□□□ -1.3
SDHB-204ENST00000475049 RARAP10276 462 aa6.95□□□□□ -1.3
SDHB-204ENST00000475049 NFKB1P19838 968 aa6.95□□□□□ -1.3
SDHB-204ENST00000475049 FMR1Q06787 632 aaKnown RBP eCLIP6.95□□□□□ -1.3
SDHB-204ENST00000475049 COL19A1Q14993 1142 aa6.95□□□□□ -1.3
SDHB-204ENST00000475049 XKR5Q6UX68 686 aa6.95□□□□□ -1.3
SDHB-204ENST00000475049 SNX29Q8TEQ0 813 aa6.95□□□□□ -1.3
SDHB-204ENST00000475049 SLC30A3Q99726 388 aa6.95□□□□□ -1.3
SDHB-204ENST00000475049 BCL11AQ9H165 835 aa6.95□□□□□ -1.3
SDHB-204ENST00000475049 TMEM63CQ9P1W3 806 aa6.95□□□□□ -1.3
SDHB-204ENST00000475049 FOXD3Q9UJU5 478 aaPredicted RBP6.95□□□□□ -1.3
SDHB-204ENST00000475049 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.95□□□□□ -1.3
SDHB-204ENST00000475049 EIF1AYO14602 144 aaKnown RBP6.94□□□□□ -1.3
SDHB-204ENST00000475049 CPNE3O75131 537 aaKnown RBP6.94□□□□□ -1.3
SDHB-204ENST00000475049 CELA2BP08218 269 aaPredicted RBP6.94□□□□□ -1.3
SDHB-204ENST00000475049 BMP4P12644 408 aa6.94□□□□□ -1.3
SDHB-204ENST00000475049 CTBSQ01459 385 aa6.94□□□□□ -1.3
SDHB-204ENST00000475049 RASSF7Q02833 373 aa6.94□□□□□ -1.3
SDHB-204ENST00000475049 CSRNP1Q96S65 589 aa6.94□□□□□ -1.3
SDHB-204ENST00000475049 IGFLR1Q9H665 355 aa6.94□□□□□ -1.3
SDHB-204ENST00000475049 IGF1RP08069 1367 aa6.94□□□□□ -1.3
SDHB-204ENST00000475049 RBM47A0AV96 593 aaKnown RBP6.93□□□□□ -1.3
SDHB-204ENST00000475049 ZNF16P17020 682 aaPredicted RBP6.93□□□□□ -1.3
SDHB-204ENST00000475049 MX2P20592 715 aa6.93□□□□□ -1.3
SDHB-204ENST00000475049 FGD1P98174 961 aa6.93□□□□□ -1.3
SDHB-204ENST00000475049 TBC1D8BQ0IIM8 1120 aa6.93□□□□□ -1.3
SDHB-204ENST00000475049 FBXO33Q7Z6M2 555 aa6.93□□□□□ -1.3
SDHB-204ENST00000475049 HCN2Q9UL51 889 aa6.93□□□□□ -1.3
SDHB-204ENST00000475049 PHF20L1A8MW92 1017 aa6.92□□□□□ -1.3
SDHB-204ENST00000475049 RNF225M0QZC1 329 aaPredicted RBP6.92□□□□□ -1.3
SDHB-204ENST00000475049 PSAPP07602 524 aa6.92□□□□□ -1.3
SDHB-204ENST00000475049 CES1P23141 567 aa6.92□□□□□ -1.3
SDHB-204ENST00000475049 TAGLNQ01995 201 aaKnown RBP6.92□□□□□ -1.3
SDHB-204ENST00000475049 ENOX2Q16206 610 aaKnown RBP6.92□□□□□ -1.3
SDHB-204ENST00000475049 FAM182BQ5T319 152 aa6.92□□□□□ -1.3
SDHB-204ENST00000475049 TMEM151AQ8N4L1 468 aa6.92□□□□□ -1.3
SDHB-204ENST00000475049 C1orf127Q8N9H9 656 aa6.92□□□□□ -1.3
SDHB-204ENST00000475049 DNAJC25Q9H1X3 360 aa6.92□□□□□ -1.3
SDHB-204ENST00000475049 CNTN3Q9P232 1028 aa6.92□□□□□ -1.3
SDHB-204ENST00000475049 ZFATQ9P243 1243 aa6.92□□□□□ -1.3
SDHB-204ENST00000475049 WWC3Q9ULE0 1092 aa6.92□□□□□ -1.3
SDHB-204ENST00000475049 NSFL1CQ9UNZ2 370 aaKnown RBP6.92□□□□□ -1.3
SDHB-204ENST00000475049 MMP20O60882 483 aa6.91□□□□□ -1.3
SDHB-204ENST00000475049 PRPF40AO75400 957 aaKnown RBP6.91□□□□□ -1.3
SDHB-204ENST00000475049 GDF11O95390 407 aa6.91□□□□□ -1.3
SDHB-204ENST00000475049 POLR3DP05423 398 aaPredicted RBP6.91□□□□□ -1.3
SDHB-204ENST00000475049 XPCQ01831 940 aaPredicted RBP6.91□□□□□ -1.3
SDHB-204ENST00000475049 MAP3K10Q02779 954 aa6.91□□□□□ -1.3
SDHB-204ENST00000475049 USPL1Q5W0Q7 1092 aa6.91□□□□□ -1.3
SDHB-204ENST00000475049 ALG1LQ6GMV1 187 aa6.91□□□□□ -1.3
SDHB-204ENST00000475049 PMEPA1Q969W9 287 aa6.91□□□□□ -1.3
SDHB-204ENST00000475049 ACDQ96AP0 544 aa6.91□□□□□ -1.3
SDHB-204ENST00000475049 SETDB2Q96T68 719 aa6.91□□□□□ -1.3
SDHB-204ENST00000475049 EFCC1Q9HA90 598 aa6.91□□□□□ -1.3
SDHB-204ENST00000475049 ZFYVE28Q9HCC9 887 aa6.91□□□□□ -1.3
SDHB-204ENST00000475049 KANSL3Q9P2N6 904 aa6.91□□□□□ -1.3
SDHB-204ENST00000475049 EREGO14944 169 aa6.9□□□□□ -1.3
SDHB-204ENST00000475049 CYP2E1P05181 493 aaPredicted RBP6.9□□□□□ -1.3
SDHB-204ENST00000475049 BCRP11274 1271 aa6.9□□□□□ -1.3
SDHB-204ENST00000475049 PCBP4P57723 403 aaKnown RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 560.5 ms