RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 LMOD2Q6P5Q4 547 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 RGS22Q8NE09 1264 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 KCNB2Q92953 911 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 FUCA2Q9BTY2 467 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 NAT10Q9H0A0 1025 aaKnown RBP9.49□□□□□ -0.89
CCDC93-208ENST00000474546 HMG20BQ9P0W2 317 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 CALCOCO1Q9P1Z2 691 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 STK26Q9P289 416 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 THRAP3Q9Y2W1 955 aaKnown RBP9.49□□□□□ -0.89
CCDC93-208ENST00000474546 CYP46A1Q9Y6A2 500 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 LRRC37A3O60309 1634 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 PAPPAQ13219 1627 aa9.49□□□□□ -0.89
CCDC93-208ENST00000474546 FAM208AQ9UK61 1670 aaKnown RBP9.48□□□□□ -0.89
CCDC93-208ENST00000474546 CRB1P82279 1406 aa9.48□□□□□ -0.89
CCDC93-208ENST00000474546 UBTFL1P0CB47 393 aaPredicted RBP9.48□□□□□ -0.89
CCDC93-208ENST00000474546 SYT1P21579 422 aa9.48□□□□□ -0.89
CCDC93-208ENST00000474546 KRT32Q14532 448 aa9.48□□□□□ -0.89
CCDC93-208ENST00000474546 SARM1Q6SZW1 724 aa9.48□□□□□ -0.89
CCDC93-208ENST00000474546 KRT222Q8N1A0 295 aa9.48□□□□□ -0.89
CCDC93-208ENST00000474546 SSH3Q8TE77 659 aa9.48□□□□□ -0.89
CCDC93-208ENST00000474546 RILPL2Q969X0 211 aa9.48□□□□□ -0.89
CCDC93-208ENST00000474546 TTC14Q96N46 770 aa9.48□□□□□ -0.89
CCDC93-208ENST00000474546 MEIS3Q99687 375 aa9.48□□□□□ -0.89
CCDC93-208ENST00000474546 ZSCAN16Q9H4T2 348 aaPredicted RBP9.48□□□□□ -0.89
CCDC93-208ENST00000474546 CFAP45Q9UL16 551 aa9.48□□□□□ -0.89
CCDC93-208ENST00000474546 KDRP35968 1356 aa9.48□□□□□ -0.89
CCDC93-208ENST00000474546 USP31Q70CQ4 1352 aa9.48□□□□□ -0.89
CCDC93-208ENST00000474546 GOLGA6L19H0YKK7 550 aa9.47□□□□□ -0.89
CCDC93-208ENST00000474546 HCLS1P14317 486 aaPredicted RBP9.47□□□□□ -0.89
CCDC93-208ENST00000474546 TUBB4BP68371 445 aa9.47□□□□□ -0.89
CCDC93-208ENST00000474546 SLC20A2Q08357 652 aa9.47□□□□□ -0.89
CCDC93-208ENST00000474546 RBM43Q6ZSC3 357 aaKnown RBP9.47□□□□□ -0.89
CCDC93-208ENST00000474546 ZNF397Q8NF99 534 aaPredicted RBP9.47□□□□□ -0.89
CCDC93-208ENST00000474546 TDRD7Q8NHU6 1098 aaKnown RBP9.47□□□□□ -0.89
CCDC93-208ENST00000474546 MRFAP1L1Q96HT8 127 aa9.47□□□□□ -0.89
CCDC93-208ENST00000474546 CREBZFQ9NS37 354 aa9.47□□□□□ -0.89
CCDC93-208ENST00000474546 ARGLU1Q9NWB6 273 aaPredicted RBP9.47□□□□□ -0.89
CCDC93-208ENST00000474546 IMPACTQ9P2X3 320 aa9.47□□□□□ -0.89
CCDC93-208ENST00000474546 MKRN1Q9UHC7 482 aaKnown RBP9.47□□□□□ -0.89
CCDC93-208ENST00000474546 TSPYL4Q9UJ04 414 aa9.47□□□□□ -0.89
CCDC93-208ENST00000474546 MORC2Q9Y6X9 1032 aaPredicted RBP9.47□□□□□ -0.89
CCDC93-208ENST00000474546 RFX7Q2KHR2 1363 aa9.47□□□□□ -0.89
CCDC93-208ENST00000474546 PLEKHG2Q9H7P9 1386 aa9.47□□□□□ -0.89
CCDC93-208ENST00000474546 FMN2Q9NZ56 1722 aa9.46□□□□□ -0.89
CCDC93-208ENST00000474546 ELL2O00472 640 aaPredicted RBP9.46□□□□□ -0.9
CCDC93-208ENST00000474546 ATP8B1O43520 1251 aa9.46□□□□□ -0.9
CCDC93-208ENST00000474546 MYO1BO43795 1136 aa9.46□□□□□ -0.9
CCDC93-208ENST00000474546 TPM4P67936 248 aa9.46□□□□□ -0.9
CCDC93-208ENST00000474546 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.46□□□□□ -0.9
CCDC93-208ENST00000474546 ERO1AQ96HE7 468 aa9.46□□□□□ -0.9
CCDC93-208ENST00000474546 SRRTQ9BXP5 876 aaKnown RBP9.46□□□□□ -0.9
CCDC93-208ENST00000474546 TNMDQ9H2S6 317 aa9.46□□□□□ -0.9
CCDC93-208ENST00000474546 PRDM11Q9NQV5 511 aa9.46□□□□□ -0.9
CCDC93-208ENST00000474546 FLT4P35916 1363 aa9.46□□□□□ -0.9
CCDC93-208ENST00000474546 BCL9O00512 1426 aa9.46□□□□□ -0.9
CCDC93-208ENST00000474546 RIOK3O14730 519 aaKnown RBP9.45□□□□□ -0.9
CCDC93-208ENST00000474546 TYRO3Q06418 890 aa9.45□□□□□ -0.9
CCDC93-208ENST00000474546 FLIIQ13045 1269 aa9.45□□□□□ -0.9
CCDC93-208ENST00000474546 SAFB2Q14151 953 aaKnown RBP eCLIP9.45□□□□□ -0.9
CCDC93-208ENST00000474546 TEX35Q5T0J7 233 aa9.45□□□□□ -0.9
CCDC93-208ENST00000474546 ZNF771Q7L3S4 317 aaPredicted RBP9.45□□□□□ -0.9
CCDC93-208ENST00000474546 DRC7Q8IY82 874 aa9.45□□□□□ -0.9
CCDC93-208ENST00000474546 ZNF710Q8N1W2 664 aa9.45□□□□□ -0.9
CCDC93-208ENST00000474546 KIF18AQ8NI77 898 aa9.45□□□□□ -0.9
CCDC93-208ENST00000474546 EVI5LQ96CN4 794 aa9.45□□□□□ -0.9
CCDC93-208ENST00000474546 TTC12Q9H892 705 aaPredicted RBP9.45□□□□□ -0.9
CCDC93-208ENST00000474546 ZSWIM6Q9HCJ5 1215 aa9.45□□□□□ -0.9
CCDC93-208ENST00000474546 STRN4Q9NRL3 753 aa9.45□□□□□ -0.9
CCDC93-208ENST00000474546 PDRG1Q9NUG6 133 aa9.45□□□□□ -0.9
CCDC93-208ENST00000474546 DDX41Q9UJV9 622 aaKnown RBP9.45□□□□□ -0.9
CCDC93-208ENST00000474546 EMILIN1Q9Y6C2 1016 aa9.45□□□□□ -0.9
CCDC93-208ENST00000474546 ROBO2Q9HCK4 1378 aa9.45□□□□□ -0.9
CCDC93-208ENST00000474546 PLEKHG3A1L390 1219 aa9.44□□□□□ -0.9
CCDC93-208ENST00000474546 SMARCA5O60264 1052 aaPredicted RBP9.44□□□□□ -0.9
CCDC93-208ENST00000474546 POLA2Q14181 598 aa9.44□□□□□ -0.9
CCDC93-208ENST00000474546 BMS1Q14692 1282 aaKnown RBP9.44□□□□□ -0.9
CCDC93-208ENST00000474546 SULT6B1Q6IMI4 303 aa9.44□□□□□ -0.9
CCDC93-208ENST00000474546 PTF1AQ7RTS3 328 aa9.44□□□□□ -0.9
CCDC93-208ENST00000474546 PLA2G4DQ86XP0 818 aa9.44□□□□□ -0.9
CCDC93-208ENST00000474546 CLASRPQ8N2M8 674 aaKnown RBP9.44□□□□□ -0.9
CCDC93-208ENST00000474546 NUDT16Q96DE0 195 aaKnown RBP9.44□□□□□ -0.9
CCDC93-208ENST00000474546 THUMPD2Q9BTF0 503 aaKnown RBP9.44□□□□□ -0.9
CCDC93-208ENST00000474546 TRIM5Q9C035 493 aa9.44□□□□□ -0.9
CCDC93-208ENST00000474546 CLSTN2Q9H4D0 955 aa9.44□□□□□ -0.9
CCDC93-208ENST00000474546 RRAGCQ9HB90 399 aa9.44□□□□□ -0.9
CCDC93-208ENST00000474546 SNRKQ9NRH2 765 aa9.44□□□□□ -0.9
CCDC93-208ENST00000474546 NSFL1CQ9UNZ2 370 aaKnown RBP9.44□□□□□ -0.9
CCDC93-208ENST00000474546 CNPY2Q9Y2B0 182 aa9.44□□□□□ -0.9
CCDC93-208ENST00000474546 SNX14Q9Y5W7 946 aa9.44□□□□□ -0.9
CCDC93-208ENST00000474546 V9GYY5 206 aaPredicted RBP9.44□□□□□ -0.9
CCDC93-208ENST00000474546 CNTNAP1P78357 1384 aa9.44□□□□□ -0.9
CCDC93-208ENST00000474546 FIBPO43427 364 aa9.43□□□□□ -0.9
CCDC93-208ENST00000474546 HMGB1P09429 215 aaKnown RBP9.43□□□□□ -0.9
CCDC93-208ENST00000474546 TNNT1P13805 278 aa9.43□□□□□ -0.9
CCDC93-208ENST00000474546 CDK11BP21127 795 aaKnown RBP9.43□□□□□ -0.9
CCDC93-208ENST00000474546 GJB2P29033 226 aa9.43□□□□□ -0.9
CCDC93-208ENST00000474546 ZNF75DP51815 510 aa9.43□□□□□ -0.9
CCDC93-208ENST00000474546 AK2P54819 239 aa9.43□□□□□ -0.9
CCDC93-208ENST00000474546 EVA1CP58658 441 aa9.43□□□□□ -0.9
CCDC93-208ENST00000474546 CBX1P83916 185 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms