RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 ERC1Q8IUD2 1116 aa17.23■□□□□ 0.35
NELFCD-204ENST00000474543 GPATCH3Q96I76 525 aa17.23■□□□□ 0.35
NELFCD-204ENST00000474543 CYP46A1Q9Y6A2 500 aa17.23■□□□□ 0.35
NELFCD-204ENST00000474543 SOCS7O14512 581 aa17.23■□□□□ 0.35
NELFCD-204ENST00000474543 DTNBO60941 627 aa17.23■□□□□ 0.35
NELFCD-204ENST00000474543 ST3GAL1Q11201 340 aa17.23■□□□□ 0.35
NELFCD-204ENST00000474543 PROSER3Q2NL68 480 aa17.23■□□□□ 0.35
NELFCD-204ENST00000474543 PLEKHO1Q53GL0 409 aaPredicted RBP17.23■□□□□ 0.35
NELFCD-204ENST00000474543 KSR2Q6VAB6 950 aa17.23■□□□□ 0.35
NELFCD-204ENST00000474543 EVI5LQ96CN4 794 aa17.23■□□□□ 0.35
NELFCD-204ENST00000474543 SH2B1Q9NRF2 756 aaPredicted RBP17.23■□□□□ 0.35
NELFCD-204ENST00000474543 PCDH11XQ9BZA7 1347 aa17.22■□□□□ 0.35
NELFCD-204ENST00000474543 PCDH11YQ9BZA8 1340 aa17.22■□□□□ 0.35
NELFCD-204ENST00000474543 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
NELFCD-204ENST00000474543 ADCY5O95622 1261 aa17.22■□□□□ 0.35
NELFCD-204ENST00000474543 DNM1Q05193 864 aaKnown RBP17.22■□□□□ 0.35
NELFCD-204ENST00000474543 SASS6Q6UVJ0 657 aa17.22■□□□□ 0.35
NELFCD-204ENST00000474543 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.22■□□□□ 0.351e-9■□□□□ 10.7
NELFCD-204ENST00000474543 CCDC171Q6TFL3 1326 aa17.22■□□□□ 0.35
NELFCD-204ENST00000474543 GIGYF1O75420 1035 aaPredicted RBP17.21■□□□□ 0.35
NELFCD-204ENST00000474543 CWF19L2Q2TBE0 894 aaKnown RBP17.21■□□□□ 0.35
NELFCD-204ENST00000474543 AMOTQ4VCS5 1084 aa17.21■□□□□ 0.35
NELFCD-204ENST00000474543 AACSQ86V21 672 aa17.21■□□□□ 0.35
NELFCD-204ENST00000474543 FUCA2Q9BTY2 467 aa17.21■□□□□ 0.35
NELFCD-204ENST00000474543 ME3Q16798 604 aa17.21■□□□□ 0.35
NELFCD-204ENST00000474543 MPNDQ8N594 471 aa17.21■□□□□ 0.35
NELFCD-204ENST00000474543 UPF1Q92900 1129 aaKnown RBP eCLIP17.21■□□□□ 0.351e-6■□□□□ 9.8
NELFCD-204ENST00000474543 HEG1Q9ULI3 1381 aa17.21■□□□□ 0.34
NELFCD-204ENST00000474543 SHANK3Q9BYB0 1731 aa17.21■□□□□ 0.34
NELFCD-204ENST00000474543 TRIM37O94972 964 aa17.2■□□□□ 0.34
NELFCD-204ENST00000474543 KLHL34Q8N239 644 aa17.2■□□□□ 0.34
NELFCD-204ENST00000474543 ZNF830Q96NB3 372 aaPredicted RBP17.2■□□□□ 0.34
NELFCD-204ENST00000474543 HDAC5Q9UQL6 1122 aa17.2■□□□□ 0.34
NELFCD-204ENST00000474543 RBM8AQ9Y5S9 174 aaKnown RBP17.2■□□□□ 0.34
NELFCD-204ENST00000474543 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
NELFCD-204ENST00000474543 CYP27B1O15528 508 aa17.2■□□□□ 0.34
NELFCD-204ENST00000474543 SASH1O94885 1247 aa17.2■□□□□ 0.34
NELFCD-204ENST00000474543 ZKSCAN1P17029 563 aaPredicted RBP17.2■□□□□ 0.34
NELFCD-204ENST00000474543 CREB3L3Q68CJ9 461 aa17.2■□□□□ 0.34
NELFCD-204ENST00000474543 GIMAP6Q6P9H5 292 aa17.2■□□□□ 0.34
NELFCD-204ENST00000474543 VSIG10Q8N0Z9 540 aa17.2■□□□□ 0.34
NELFCD-204ENST00000474543 MAP4K1Q92918 833 aa17.2■□□□□ 0.34
NELFCD-204ENST00000474543 FAM13BQ9NYF5 915 aa17.2■□□□□ 0.34
NELFCD-204ENST00000474543 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.2■□□□□ 0.34
NELFCD-204ENST00000474543 PRAMEF22A3QJZ6 481 aa17.19■□□□□ 0.34
NELFCD-204ENST00000474543 DYNC1I1O14576 645 aa17.19■□□□□ 0.34
NELFCD-204ENST00000474543 KDM4AO75164 1064 aa17.19■□□□□ 0.34
NELFCD-204ENST00000474543 NECAB1Q8N987 351 aa17.19■□□□□ 0.34
NELFCD-204ENST00000474543 KAZALD1Q96I82 304 aa17.19■□□□□ 0.34
NELFCD-204ENST00000474543 SUCLG2Q96I99 432 aa17.19■□□□□ 0.34
NELFCD-204ENST00000474543 FAM227BQ96M60 508 aa17.19■□□□□ 0.34
NELFCD-204ENST00000474543 PLEKHG2Q9H7P9 1386 aa17.19■□□□□ 0.34
NELFCD-204ENST00000474543 NMIQ13287 307 aaPredicted RBP17.18■□□□□ 0.34
NELFCD-204ENST00000474543 SF3B2Q13435 895 aaKnown RBP17.18■□□□□ 0.34
NELFCD-204ENST00000474543 C1orf141Q5JVX7 400 aa17.18■□□□□ 0.34
NELFCD-204ENST00000474543 IFNL2Q8IZJ0 200 aa17.18■□□□□ 0.34
NELFCD-204ENST00000474543 PIBF1Q8WXW3 757 aa17.18■□□□□ 0.34
NELFCD-204ENST00000474543 EAF2Q96CJ1 260 aaPredicted RBP17.18■□□□□ 0.34
NELFCD-204ENST00000474543 ACSBG1Q96GR2 724 aa17.18■□□□□ 0.34
NELFCD-204ENST00000474543 TPCN1Q9ULQ1 816 aa17.18■□□□□ 0.34
NELFCD-204ENST00000474543 UTYO14607 1347 aa17.18■□□□□ 0.34
NELFCD-204ENST00000474543 VPS37CA5D8V6 355 aaPredicted RBP17.18■□□□□ 0.34
NELFCD-204ENST00000474543 GRM8O00222 908 aa17.18■□□□□ 0.34
NELFCD-204ENST00000474543 LINS1Q8NG48 757 aa17.18■□□□□ 0.34
NELFCD-204ENST00000474543 HIP1O00291 1037 aa17.17■□□□□ 0.34
NELFCD-204ENST00000474543 PHKG2P15735 406 aa17.17■□□□□ 0.34
NELFCD-204ENST00000474543 CCDC125Q86Z20 511 aa17.17■□□□□ 0.34
NELFCD-204ENST00000474543 BICC1Q9H694 974 aaKnown RBP17.17■□□□□ 0.34
NELFCD-204ENST00000474543 TTC12Q9H892 705 aaPredicted RBP17.17■□□□□ 0.34
NELFCD-204ENST00000474543 SNRKQ9NRH2 765 aa17.17■□□□□ 0.34
NELFCD-204ENST00000474543 SLC27A2O14975 620 aa17.16■□□□□ 0.34
NELFCD-204ENST00000474543 KCNJ4P48050 445 aa17.16■□□□□ 0.34
NELFCD-204ENST00000474543 G3BP1Q13283 466 aaKnown RBP eCLIP17.16■□□□□ 0.347e-8■■■□□ 15.6
NELFCD-204ENST00000474543 COL9A3Q14050 684 aaPredicted RBP17.16■□□□□ 0.34
NELFCD-204ENST00000474543 MAP7D2Q96T17 732 aa17.16■□□□□ 0.34
NELFCD-204ENST00000474543 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
NELFCD-204ENST00000474543 BCL9O00512 1426 aa17.16■□□□□ 0.34
NELFCD-204ENST00000474543 SIPA1L3O60292 1781 aaPredicted RBP17.16■□□□□ 0.34
NELFCD-204ENST00000474543 LARP1BQ659C4 914 aaKnown RBP17.16■□□□□ 0.34
NELFCD-204ENST00000474543 SYTL4Q96C24 671 aaPredicted RBP17.16■□□□□ 0.34
NELFCD-204ENST00000474543 SBF2Q86WG5 1849 aa17.16■□□□□ 0.34
NELFCD-204ENST00000474543 PSMA5P28066 241 aa17.15■□□□□ 0.34
NELFCD-204ENST00000474543 NOLC1Q14978 699 aaKnown RBP eCLIP17.15■□□□□ 0.34
NELFCD-204ENST00000474543 TLR7Q9NYK1 1049 aaKnown RBP17.15■□□□□ 0.34
NELFCD-204ENST00000474543 A0A0D9SFI3 127 aa17.14■□□□□ 0.34
NELFCD-204ENST00000474543 AP5Z1O43299 807 aa17.14■□□□□ 0.34
NELFCD-204ENST00000474543 KCNQ2O43526 872 aa17.14■□□□□ 0.34
NELFCD-204ENST00000474543 TTC6Q86TZ1 520 aa17.14■□□□□ 0.33
NELFCD-204ENST00000474543 BCL11BQ9C0K0 894 aaPredicted RBP17.14■□□□□ 0.33
NELFCD-204ENST00000474543 BOLA2Q9H3K6 86 aa17.14■□□□□ 0.33
NELFCD-204ENST00000474543 DDX21Q9NR30 783 aaKnown RBP eCLIP17.14■□□□□ 0.33
NELFCD-204ENST00000474543 PDIA4P13667 645 aaKnown RBP17.13■□□□□ 0.33
NELFCD-204ENST00000474543 AIMP1Q12904 312 aaKnown RBP17.13■□□□□ 0.33
NELFCD-204ENST00000474543 PDIA6Q15084 440 aa17.13■□□□□ 0.33
NELFCD-204ENST00000474543 NKX1-1Q15270 411 aaPredicted RBP17.13■□□□□ 0.33
NELFCD-204ENST00000474543 DNTTIP2Q5QJE6 756 aaKnown RBP17.13■□□□□ 0.33
NELFCD-204ENST00000474543 CDC37L1Q7L3B6 337 aa17.13■□□□□ 0.33
NELFCD-204ENST00000474543 PTF1AQ7RTS3 328 aa17.13■□□□□ 0.33
NELFCD-204ENST00000474543 DDX58O95786 925 aaKnown RBP17.13■□□□□ 0.33
NELFCD-204ENST00000474543 APBA3O96018 575 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms