RNA–Protein interactions for RNA: ENST00000474330.1

CDHR3-210, Transcript of cadherin related family member 3, humanhuman

TSL 5

Gene CDHR3, Length 1,603 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-210ENST00000474330 MYH3P11055 1940 aa25.21■■□□□ 1.63
CDHR3-210ENST00000474330 DCAF8L1A6NGE4 600 aa25.21■■□□□ 1.63
CDHR3-210ENST00000474330 SYNE4Q8N205 404 aa25.21■■□□□ 1.63
CDHR3-210ENST00000474330 LRRCC1Q9C099 1032 aa25.21■■□□□ 1.63
CDHR3-210ENST00000474330 SH3TC1Q8TE82 1336 aa25.2■■□□□ 1.62
CDHR3-210ENST00000474330 IRS4O14654 1257 aaPredicted RBP25.2■■□□□ 1.62
CDHR3-210ENST00000474330 RFX5P48382 616 aaPredicted RBP25.2■■□□□ 1.62
CDHR3-210ENST00000474330 TBC1D9BQ66K14 1250 aa25.2■■□□□ 1.62
CDHR3-210ENST00000474330 APBB1O00213 710 aa25.19■■□□□ 1.62
CDHR3-210ENST00000474330 NTSR2O95665 410 aa25.19■■□□□ 1.62
CDHR3-210ENST00000474330 CSF1RP07333 972 aa25.19■■□□□ 1.62
CDHR3-210ENST00000474330 DDR1Q08345 913 aa25.19■■□□□ 1.62
CDHR3-210ENST00000474330 COPRSQ9NQ92 184 aa25.19■■□□□ 1.62
CDHR3-210ENST00000474330 PA2G4Q9UQ80 394 aaKnown RBP25.19■■□□□ 1.62
CDHR3-210ENST00000474330 KIAA1551Q9HCM1 1747 aa25.18■■□□□ 1.62
CDHR3-210ENST00000474330 SMARCA5O60264 1052 aaPredicted RBP25.18■■□□□ 1.62
CDHR3-210ENST00000474330 PDE8AO60658 829 aa25.18■■□□□ 1.62
CDHR3-210ENST00000474330 BICDL1Q6ZP65 573 aa25.18■■□□□ 1.62
CDHR3-210ENST00000474330 SETDB2Q96T68 719 aa25.18■■□□□ 1.62
CDHR3-210ENST00000474330 PTPN12Q05209 780 aaKnown RBP25.17■■□□□ 1.62
CDHR3-210ENST00000474330 KIF1BPQ96EK5 621 aa25.17■■□□□ 1.62
CDHR3-210ENST00000474330 PARP3Q9Y6F1 533 aa25.17■■□□□ 1.62
CDHR3-210ENST00000474330 LAMB2P55268 1798 aa25.17■■□□□ 1.62
CDHR3-210ENST00000474330 HSP90B1P14625 803 aaKnown RBP25.16■■□□□ 1.62
CDHR3-210ENST00000474330 ERC1Q8IUD2 1116 aa25.16■■□□□ 1.62
CDHR3-210ENST00000474330 RHPN1Q8TCX5 695 aa25.16■■□□□ 1.62
CDHR3-210ENST00000474330 CHMP3Q9Y3E7 222 aa25.16■■□□□ 1.62
CDHR3-210ENST00000474330 FAM177BA6PVY3 158 aa25.15■■□□□ 1.62
CDHR3-210ENST00000474330 POLRMTO00411 1230 aaKnown RBP25.15■■□□□ 1.62
CDHR3-210ENST00000474330 YBX3P16989 372 aaKnown RBP eCLIP25.15■■□□□ 1.62
CDHR3-210ENST00000474330 GPR162Q16538 588 aa25.15■■□□□ 1.62
CDHR3-210ENST00000474330 DDX60Q8IY21 1712 aaKnown RBP25.15■■□□□ 1.62
CDHR3-210ENST00000474330 CARMIL3Q8ND23 1372 aa25.15■■□□□ 1.62
CDHR3-210ENST00000474330 CTSWP56202 376 aa25.15■■□□□ 1.62
CDHR3-210ENST00000474330 G3BP1Q13283 466 aaKnown RBP eCLIP25.15■■□□□ 1.62
CDHR3-210ENST00000474330 NFIXQ14938 502 aa25.15■■□□□ 1.62
CDHR3-210ENST00000474330 TTLL11Q8NHH1 800 aa25.15■■□□□ 1.62
CDHR3-210ENST00000474330 C10orf71Q711Q0 1435 aa25.15■■□□□ 1.62
CDHR3-210ENST00000474330 OS9Q13438 667 aaPredicted RBP25.14■■□□□ 1.61
CDHR3-210ENST00000474330 KLHDC4Q8TBB5 520 aa25.14■■□□□ 1.61
CDHR3-210ENST00000474330 NYXQ9GZU5 481 aa25.14■■□□□ 1.61
CDHR3-210ENST00000474330 C16orf71Q8IYS4 520 aaPredicted RBP25.13■■□□□ 1.61
CDHR3-210ENST00000474330 CHD4Q14839 1912 aa25.13■■□□□ 1.61
CDHR3-210ENST00000474330 CCDC57Q2TAC2 916 aa25.12■■□□□ 1.61
CDHR3-210ENST00000474330 NRXN2Q9P2S2 1712 aa25.12■■□□□ 1.61
CDHR3-210ENST00000474330 NUTM1Q86Y26 1132 aa25.12■■□□□ 1.61
CDHR3-210ENST00000474330 PLEKHM2Q8IWE5 1019 aa25.12■■□□□ 1.61
CDHR3-210ENST00000474330 HCLS1P14317 486 aaPredicted RBP25.11■■□□□ 1.61
CDHR3-210ENST00000474330 FAM161AQ3B820 660 aa25.11■■□□□ 1.61
CDHR3-210ENST00000474330 NBPF5PQ86XG9 351 aaPredicted RBP25.11■■□□□ 1.61
CDHR3-210ENST00000474330 SIL1Q9H173 461 aa25.11■■□□□ 1.61
CDHR3-210ENST00000474330 SASH1O94885 1247 aa25.1■■□□□ 1.61
CDHR3-210ENST00000474330 TGFB2P61812 414 aa25.1■■□□□ 1.61
CDHR3-210ENST00000474330 IFIT5Q13325 482 aaKnown RBP25.1■■□□□ 1.61
CDHR3-210ENST00000474330 SLC10A5Q5PT55 438 aa25.1■■□□□ 1.61
CDHR3-210ENST00000474330 TPTE2Q6XPS3 522 aa25.1■■□□□ 1.61
CDHR3-210ENST00000474330 IL1RAPL2Q9NP60 686 aa25.1■■□□□ 1.61
CDHR3-210ENST00000474330 ERFEQ4G0M1 354 aa25.09■■□□□ 1.61
CDHR3-210ENST00000474330 FBXO3Q9UK99 471 aa25.09■■□□□ 1.61
CDHR3-210ENST00000474330 SALL3Q9BXA9 1300 aa25.09■■□□□ 1.61
CDHR3-210ENST00000474330 A0A0G2JLW4 131 aa25.08■■□□□ 1.61
CDHR3-210ENST00000474330 OTUD7AQ8TE49 926 aaPredicted RBP25.08■■□□□ 1.61
CDHR3-210ENST00000474330 GREM2Q9H772 168 aa25.08■■□□□ 1.61
CDHR3-210ENST00000474330 BRCA1P38398 1863 aaKnown RBP25.08■■□□□ 1.61
CDHR3-210ENST00000474330 KCNA3P22001 575 aa25.08■■□□□ 1.6
CDHR3-210ENST00000474330 GTF2E1P29083 439 aaPredicted RBP25.08■■□□□ 1.6
CDHR3-210ENST00000474330 CCDC85AQ96PX6 553 aaPredicted RBP25.08■■□□□ 1.6
CDHR3-210ENST00000474330 BCL11AQ9H165 835 aa25.08■■□□□ 1.6
CDHR3-210ENST00000474330 WWC3Q9ULE0 1092 aa25.08■■□□□ 1.6
CDHR3-210ENST00000474330 CIAO1O76071 339 aa25.07■■□□□ 1.6
CDHR3-210ENST00000474330 ITGA6P23229 1130 aa25.07■■□□□ 1.6
CDHR3-210ENST00000474330 CLASRPQ8N2M8 674 aaKnown RBP25.07■■□□□ 1.6
CDHR3-210ENST00000474330 OSBPL3Q9H4L5 887 aa25.07■■□□□ 1.6
CDHR3-210ENST00000474330 ANKRD18BA2A2Z9 1011 aa25.06■■□□□ 1.6
CDHR3-210ENST00000474330 EYA2O00167 538 aa25.06■■□□□ 1.6
CDHR3-210ENST00000474330 NPHP1O15259 732 aa25.06■■□□□ 1.6
CDHR3-210ENST00000474330 SERPINB2P05120 415 aa25.06■■□□□ 1.6
CDHR3-210ENST00000474330 YY1P25490 414 aa25.06■■□□□ 1.6
CDHR3-210ENST00000474330 ZNF594Q96JF6 807 aaPredicted RBP25.06■■□□□ 1.6
CDHR3-210ENST00000474330 RTL9Q8NET4 1388 aa25.06■■□□□ 1.6
CDHR3-210ENST00000474330 DPEP1P16444 411 aa25.05■■□□□ 1.6
CDHR3-210ENST00000474330 CCDC152Q4G0S7 254 aa25.05■■□□□ 1.6
CDHR3-210ENST00000474330 ATG9AQ7Z3C6 839 aa25.05■■□□□ 1.6
CDHR3-210ENST00000474330 CNBD1Q8NA66 436 aa25.05■■□□□ 1.6
CDHR3-210ENST00000474330 IL15P40933 162 aaPredicted RBP25.04■■□□□ 1.6
CDHR3-210ENST00000474330 PDE1AP54750 535 aa25.04■■□□□ 1.6
CDHR3-210ENST00000474330 ABCC12Q96J65 1359 aa25.04■■□□□ 1.6
CDHR3-210ENST00000474330 SF3B3Q15393 1217 aaKnown RBP25.04■■□□□ 1.6
CDHR3-210ENST00000474330 BMP2KLQ5H9B9 411 aa25.04■■□□□ 1.6
CDHR3-210ENST00000474330 TAF7LQ5H9L4 462 aa25.04■■□□□ 1.6
CDHR3-210ENST00000474330 STAP2Q9UGK3 403 aa25.04■■□□□ 1.6
CDHR3-210ENST00000474330 GRIN3BO60391 1043 aa25.03■■□□□ 1.6
CDHR3-210ENST00000474330 MX1P20591 662 aa25.03■■□□□ 1.6
CDHR3-210ENST00000474330 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.03■■□□□ 1.6
CDHR3-210ENST00000474330 LRRC24Q50LG9 513 aa25.02■■□□□ 1.6
CDHR3-210ENST00000474330 PRR5LQ6MZQ0 368 aa25.02■■□□□ 1.6
CDHR3-210ENST00000474330 TFCP2Q12800 502 aa25.01■■□□□ 1.59
CDHR3-210ENST00000474330 TTC22Q5TAA0 569 aa25.01■■□□□ 1.59
CDHR3-210ENST00000474330 BACH2Q9BYV9 841 aa25.01■■□□□ 1.59
CDHR3-210ENST00000474330 PUS3Q9BZE2 481 aaKnown RBP25.01■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms