RNA–Protein interactions for RNA: ENST00000474240.1

ECHDC1-213, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-213ENST00000474240 USP17L21D6R901 530 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 USP17L18D6R9N7 530 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 USP17L22D6RA61 530 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 USP17L17D6RBQ6 530 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 USP17L19D6RCP7 530 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 USP17L20D6RJB6 530 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 MED26O95402 600 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 USP17L24Q0WX57 530 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 TNS4Q8IZW8 715 aa6.33□□□□□ -1.4
ECHDC1-213ENST00000474240 SEC13P55735 322 aa6.32□□□□□ -1.4
ECHDC1-213ENST00000474240 CLDN10P78369 228 aa6.32□□□□□ -1.4
ECHDC1-213ENST00000474240 PTK7Q13308 1070 aa6.32□□□□□ -1.4
ECHDC1-213ENST00000474240 CCDC102BQ68D86 513 aa6.32□□□□□ -1.4
ECHDC1-213ENST00000474240 DTWD1Q8N5C7 304 aa6.32□□□□□ -1.4
ECHDC1-213ENST00000474240 TPCN2Q8NHX9 752 aa6.32□□□□□ -1.4
ECHDC1-213ENST00000474240 PHACTR1Q9C0D0 580 aa6.32□□□□□ -1.4
ECHDC1-213ENST00000474240 KIAA1324LA8MWY0 1029 aaPredicted RBP6.31□□□□□ -1.4
ECHDC1-213ENST00000474240 TGFB1P01137 390 aa6.31□□□□□ -1.4
ECHDC1-213ENST00000474240 CPB1P15086 417 aa6.31□□□□□ -1.4
ECHDC1-213ENST00000474240 FAM35AQ86V20 835 aa6.31□□□□□ -1.4
ECHDC1-213ENST00000474240 ANKMY2Q8IV38 441 aa6.31□□□□□ -1.4
ECHDC1-213ENST00000474240 SUSD3Q96L08 255 aa6.31□□□□□ -1.4
ECHDC1-213ENST00000474240 ANKIB1Q9P2G1 1089 aa6.31□□□□□ -1.4
ECHDC1-213ENST00000474240 HCN4Q9Y3Q4 1203 aa6.31□□□□□ -1.4
ECHDC1-213ENST00000474240 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 ALX3O95076 343 aa6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 NFKB1P19838 968 aa6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 SRPK2P78362 688 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 PLAURQ03405 335 aa6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 GRIK5Q16478 980 aa6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 SWI5Q1ZZU3 235 aa6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 IGF2-ASQ6U949 168 aa6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 WFDC8Q8IUA0 241 aa6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 DZIP1LQ8IYY4 767 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 FAM200AQ8TCP9 573 aa6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 ZNF594Q96JF6 807 aaPredicted RBP6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 ARID3AQ99856 593 aa6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 NOVA2Q9UNW9 492 aaKnown RBP6.3□□□□□ -1.4
ECHDC1-213ENST00000474240 DEAF1O75398 565 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-213ENST00000474240 PSMA6P60900 246 aaKnown RBP6.29□□□□□ -1.4
ECHDC1-213ENST00000474240 CRTC2Q53ET0 693 aaPredicted RBP6.29□□□□□ -1.4
ECHDC1-213ENST00000474240 C1orf53Q5VUE5 145 aa6.29□□□□□ -1.4
ECHDC1-213ENST00000474240 GAS2L2Q8NHY3 880 aa6.29□□□□□ -1.4
ECHDC1-213ENST00000474240 PNMA5Q96PV4 448 aa6.29□□□□□ -1.4
ECHDC1-213ENST00000474240 LPIN3Q9BQK8 851 aa6.29□□□□□ -1.4
ECHDC1-213ENST00000474240 KRTAP4-2Q9BYR5 136 aa6.29□□□□□ -1.4
ECHDC1-213ENST00000474240 AKTIPQ9H8T0 292 aa6.29□□□□□ -1.4
ECHDC1-213ENST00000474240 USTQ9Y2C2 406 aa6.29□□□□□ -1.4
ECHDC1-213ENST00000474240 CHMP3Q9Y3E7 222 aa6.29□□□□□ -1.4
ECHDC1-213ENST00000474240 ZBTB7BO15156 539 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-213ENST00000474240 PTCD1O75127 700 aaKnown RBP6.28□□□□□ -1.4
ECHDC1-213ENST00000474240 ADAMTS4O75173 837 aa6.28□□□□□ -1.4
ECHDC1-213ENST00000474240 BTLAQ7Z6A9 289 aa6.28□□□□□ -1.4
ECHDC1-213ENST00000474240 SLC51AQ86UW1 340 aa6.28□□□□□ -1.4
ECHDC1-213ENST00000474240 TSPAN10Q9H1Z9 355 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-213ENST00000474240 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.28□□□□□ -1.4
ECHDC1-213ENST00000474240 JAG1P78504 1218 aa6.27□□□□□ -1.41
ECHDC1-213ENST00000474240 DPYDQ12882 1025 aa6.27□□□□□ -1.41
ECHDC1-213ENST00000474240 PERM1Q5SV97 790 aa6.27□□□□□ -1.41
ECHDC1-213ENST00000474240 B4GALNT3Q6L9W6 998 aa6.27□□□□□ -1.41
ECHDC1-213ENST00000474240 KIAA1024Q9UPX6 916 aa6.27□□□□□ -1.41
ECHDC1-213ENST00000474240 DLL1O00548 723 aa6.26□□□□□ -1.41
ECHDC1-213ENST00000474240 IGLV1-40P01703 118 aa6.26□□□□□ -1.41
ECHDC1-213ENST00000474240 HIRAP54198 1017 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-213ENST00000474240 MLLT1Q03111 559 aaPredicted RBP6.26□□□□□ -1.41
ECHDC1-213ENST00000474240 ARXQ96QS3 562 aa6.26□□□□□ -1.41
ECHDC1-213ENST00000474240 GSX2Q9BZM3 304 aa6.26□□□□□ -1.41
ECHDC1-213ENST00000474240 FRRS1LQ9P0K9 344 aa6.26□□□□□ -1.41
ECHDC1-213ENST00000474240 F8W735 103 aaPredicted RBP6.25□□□□□ -1.41
ECHDC1-213ENST00000474240 DKK1O94907 266 aa6.25□□□□□ -1.41
ECHDC1-213ENST00000474240 CCINQ13939 588 aa6.25□□□□□ -1.41
ECHDC1-213ENST00000474240 ELMSAN1Q6PJG2 1045 aa6.25□□□□□ -1.41
ECHDC1-213ENST00000474240 EFCC1Q9HA90 598 aa6.25□□□□□ -1.41
ECHDC1-213ENST00000474240 RAXQ9Y2V3 346 aa6.25□□□□□ -1.41
ECHDC1-213ENST00000474240 SPINK2P20155 84 aa6.24□□□□□ -1.41
ECHDC1-213ENST00000474240 POTEAQ6S8J7 498 aa6.24□□□□□ -1.41
ECHDC1-213ENST00000474240 AGGF1Q8N302 714 aaeCLIP6.24□□□□□ -1.41
ECHDC1-213ENST00000474240 STAG2Q8N3U4 1231 aa6.24□□□□□ -1.41
ECHDC1-213ENST00000474240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.24□□□□□ -1.41
ECHDC1-213ENST00000474240 ZMIZ1Q9ULJ6 1067 aa6.24□□□□□ -1.41
ECHDC1-213ENST00000474240 GSC2O15499 205 aa6.23□□□□□ -1.41
ECHDC1-213ENST00000474240 GLB1P16278 677 aa6.23□□□□□ -1.41
ECHDC1-213ENST00000474240 IGFBP4P22692 258 aa6.23□□□□□ -1.41
ECHDC1-213ENST00000474240 CDCA8Q53HL2 280 aa6.23□□□□□ -1.41
ECHDC1-213ENST00000474240 KRT25Q7Z3Z0 450 aa6.23□□□□□ -1.41
ECHDC1-213ENST00000474240 ALDH16A1Q8IZ83 802 aa6.23□□□□□ -1.41
ECHDC1-213ENST00000474240 CLP1Q92989 425 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-213ENST00000474240 HINFPQ9BQA5 517 aa6.23□□□□□ -1.41
ECHDC1-213ENST00000474240 MRPL18Q9H0U6 180 aaKnown RBP6.23□□□□□ -1.41
ECHDC1-213ENST00000474240 FOXO3O43524 673 aa6.22□□□□□ -1.41
ECHDC1-213ENST00000474240 PPP1R12BO60237 982 aaPredicted RBP6.22□□□□□ -1.41
ECHDC1-213ENST00000474240 ZDHHC13Q8IUH4 622 aa6.22□□□□□ -1.41
ECHDC1-213ENST00000474240 TSEN2Q8NCE0 465 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-213ENST00000474240 NGLY1Q96IV0 654 aa6.22□□□□□ -1.41
ECHDC1-213ENST00000474240 SMG9Q9H0W8 520 aaKnown RBP6.22□□□□□ -1.41
ECHDC1-213ENST00000474240 ZBTB42B2RXF5 422 aa6.21□□□□□ -1.42
ECHDC1-213ENST00000474240 GRNP28799 593 aaKnown RBP6.21□□□□□ -1.42
ECHDC1-213ENST00000474240 PCSK7Q16549 785 aa6.21□□□□□ -1.42
ECHDC1-213ENST00000474240 TMEM164Q5U3C3 297 aa6.21□□□□□ -1.42
ECHDC1-213ENST00000474240 Q6ZS46 218 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms