RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 LRRFIP2Q9Y608 721 aaKnown RBP13.07□□□□□ -0.32
CASC3-204ENST00000474190 KIF13BQ9NQT8 1826 aa13.06□□□□□ -0.32
CASC3-204ENST00000474190 DDX60Q8IY21 1712 aaKnown RBP13.06□□□□□ -0.32
CASC3-204ENST00000474190 A0A0G2JLW4 131 aa13.06□□□□□ -0.32
CASC3-204ENST00000474190 ST5P78524 1137 aa13.06□□□□□ -0.32
CASC3-204ENST00000474190 MTX1Q13505 466 aa13.06□□□□□ -0.32
CASC3-204ENST00000474190 EXOC6Q8TAG9 804 aa13.06□□□□□ -0.32
CASC3-204ENST00000474190 GREM2Q9H772 168 aa13.06□□□□□ -0.32
CASC3-204ENST00000474190 C1orf115Q9H7X2 142 aa13.06□□□□□ -0.32
CASC3-204ENST00000474190 SEC31BQ9NQW1 1179 aa13.06□□□□□ -0.32
CASC3-204ENST00000474190 RTL9Q8NET4 1388 aa13.06□□□□□ -0.32
CASC3-204ENST00000474190 SNED1Q8TER0 1413 aa13.05□□□□□ -0.32
CASC3-204ENST00000474190 MS4A1P11836 297 aa13.05□□□□□ -0.32
CASC3-204ENST00000474190 TGFB2P61812 414 aa13.05□□□□□ -0.32
CASC3-204ENST00000474190 IRX6P78412 446 aaPredicted RBP13.05□□□□□ -0.32
CASC3-204ENST00000474190 GPR162Q16538 588 aa13.05□□□□□ -0.32
CASC3-204ENST00000474190 LMBR1LQ6UX01 489 aa13.05□□□□□ -0.32
CASC3-204ENST00000474190 C7orf43Q8WVR3 580 aa13.05□□□□□ -0.32
CASC3-204ENST00000474190 DDX19BQ9UMR2 479 aa13.05□□□□□ -0.32
CASC3-204ENST00000474190 COL11A2P13942 1736 aaPredicted RBP13.05□□□□□ -0.32
CASC3-204ENST00000474190 PNMA6EA0A0J9YXQ4 647 aa13.04□□□□□ -0.32
CASC3-204ENST00000474190 GNAI3P08754 354 aa13.04□□□□□ -0.32
CASC3-204ENST00000474190 UBTFL1P0CB47 393 aaPredicted RBP13.04□□□□□ -0.32
CASC3-204ENST00000474190 PDE6BP35913 854 aa13.04□□□□□ -0.32
CASC3-204ENST00000474190 FAM161AQ3B820 660 aa13.04□□□□□ -0.32
CASC3-204ENST00000474190 C2CD5Q86YS7 1000 aa13.04□□□□□ -0.32
CASC3-204ENST00000474190 CELF1Q92879 486 aaKnown RBP13.04□□□□□ -0.32
CASC3-204ENST00000474190 NLRP3Q96P20 1036 aa13.04□□□□□ -0.32
CASC3-204ENST00000474190 CCDC85AQ96PX6 553 aaPredicted RBP13.04□□□□□ -0.32
CASC3-204ENST00000474190 PCDHB15Q9Y5E8 787 aa13.04□□□□□ -0.32
CASC3-204ENST00000474190 GNAI2P04899 355 aa13.03□□□□□ -0.32
CASC3-204ENST00000474190 CENPBP07199 599 aaPredicted RBP13.03□□□□□ -0.32
CASC3-204ENST00000474190 GTF2E1P29083 439 aaPredicted RBP13.03□□□□□ -0.32
CASC3-204ENST00000474190 POLA2Q14181 598 aa13.03□□□□□ -0.32
CASC3-204ENST00000474190 CEP85Q6P2H3 762 aa13.03□□□□□ -0.32
CASC3-204ENST00000474190 NPR1P16066 1061 aa13.02□□□□□ -0.33
CASC3-204ENST00000474190 STYK1Q6J9G0 422 aa13.02□□□□□ -0.33
CASC3-204ENST00000474190 OLFM4Q6UX06 510 aa13.02□□□□□ -0.33
CASC3-204ENST00000474190 CRAMP1Q96RY5 1269 aa13.02□□□□□ -0.33
CASC3-204ENST00000474190 LAMB2P55268 1798 aa13.02□□□□□ -0.33
CASC3-204ENST00000474190 ITGA6P23229 1130 aa13.01□□□□□ -0.33
CASC3-204ENST00000474190 ATP8B2P98198 1209 aa13.01□□□□□ -0.33
CASC3-204ENST00000474190 PTPN12Q05209 780 aaKnown RBP13.01□□□□□ -0.33
CASC3-204ENST00000474190 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
CASC3-204ENST00000474190 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
CASC3-204ENST00000474190 KLHDC4Q8TBB5 520 aa13.01□□□□□ -0.33
CASC3-204ENST00000474190 SSH3Q8TE77 659 aa13.01□□□□□ -0.33
CASC3-204ENST00000474190 MASTLQ96GX5 879 aa13.01□□□□□ -0.33
CASC3-204ENST00000474190 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.01□□□□□ -0.33
CASC3-204ENST00000474190 H0YIN7 160 aa13□□□□□ -0.33
CASC3-204ENST00000474190 GRAPQ13588 217 aa13□□□□□ -0.33
CASC3-204ENST00000474190 CCDC152Q4G0S7 254 aa13□□□□□ -0.33
CASC3-204ENST00000474190 GRAPLQ8TC17 118 aaPredicted RBP13□□□□□ -0.33
CASC3-204ENST00000474190 ZNF594Q96JF6 807 aaPredicted RBP13□□□□□ -0.33
CASC3-204ENST00000474190 PUS3Q9BZE2 481 aaKnown RBP13□□□□□ -0.33
CASC3-204ENST00000474190 WTIPA6NIX2 430 aaPredicted RBP12.99□□□□□ -0.33
CASC3-204ENST00000474190 YBX3P16989 372 aaKnown RBP eCLIP12.99□□□□□ -0.33
CASC3-204ENST00000474190 PRPF40BQ6NWY9 871 aaKnown RBP12.99□□□□□ -0.33
CASC3-204ENST00000474190 ATG9AQ7Z3C6 839 aa12.99□□□□□ -0.33
CASC3-204ENST00000474190 PDZRN3Q9UPQ7 1066 aa12.99□□□□□ -0.33
CASC3-204ENST00000474190 PA2G4Q9UQ80 394 aaKnown RBP12.99□□□□□ -0.33
CASC3-204ENST00000474190 NPHP1O15259 732 aa12.98□□□□□ -0.33
CASC3-204ENST00000474190 RPS8P62241 208 aaKnown RBP12.98□□□□□ -0.33
CASC3-204ENST00000474190 COPRSQ9NQ92 184 aa12.98□□□□□ -0.33
CASC3-204ENST00000474190 WWC3Q9ULE0 1092 aa12.98□□□□□ -0.33
CASC3-204ENST00000474190 RIPOR2Q9Y4F9 1068 aa12.98□□□□□ -0.33
CASC3-204ENST00000474190 HSP90B1P14625 803 aaKnown RBP12.97□□□□□ -0.33
CASC3-204ENST00000474190 PRELPP51888 382 aa12.97□□□□□ -0.33
CASC3-204ENST00000474190 LRRC24Q50LG9 513 aa12.97□□□□□ -0.33
CASC3-204ENST00000474190 TTLL6Q8N841 843 aa12.97□□□□□ -0.33
CASC3-204ENST00000474190 ZNF622Q969S3 477 aaKnown RBP eCLIP12.97□□□□□ -0.332e-9■■■□□ 15.4
CASC3-204ENST00000474190 RBM17Q96I25 401 aaKnown RBP12.97□□□□□ -0.33
CASC3-204ENST00000474190 BSDC1Q9NW68 430 aaPredicted RBP12.97□□□□□ -0.33
CASC3-204ENST00000474190 PIM2Q9P1W9 311 aa12.97□□□□□ -0.33
CASC3-204ENST00000474190 NOP58Q9Y2X3 529 aaKnown RBP12.97□□□□□ -0.33
CASC3-204ENST00000474190 IRS2Q9Y4H2 1338 aa12.96□□□□□ -0.33
CASC3-204ENST00000474190 SRGAP3O43295 1099 aa12.96□□□□□ -0.33
CASC3-204ENST00000474190 IFIT5Q13325 482 aaKnown RBP12.96□□□□□ -0.33
CASC3-204ENST00000474190 DDX46Q7L014 1031 aaKnown RBP12.96□□□□□ -0.33
CASC3-204ENST00000474190 RPAP2Q8IXW5 612 aaPredicted RBP12.96□□□□□ -0.33
CASC3-204ENST00000474190 VGLL2Q8N8G2 317 aa12.96□□□□□ -0.33
CASC3-204ENST00000474190 RPGRQ92834 1020 aaKnown RBP12.96□□□□□ -0.33
CASC3-204ENST00000474190 CNKSR1Q969H4 720 aa12.96□□□□□ -0.33
CASC3-204ENST00000474190 MINPP1Q9UNW1 487 aa12.96□□□□□ -0.33
CASC3-204ENST00000474190 ATP6V0A2Q9Y487 856 aa12.96□□□□□ -0.33
CASC3-204ENST00000474190 DLEC1Q9Y238 1755 aa12.96□□□□□ -0.34
CASC3-204ENST00000474190 ANKRD18BA2A2Z9 1011 aa12.95□□□□□ -0.34
CASC3-204ENST00000474190 SNAP23O00161 211 aa12.95□□□□□ -0.34
CASC3-204ENST00000474190 BBOX1O75936 387 aa12.95□□□□□ -0.34
CASC3-204ENST00000474190 IGHDP01880 384 aa12.95□□□□□ -0.34
CASC3-204ENST00000474190 HSPA6P17066 643 aa12.95□□□□□ -0.34
CASC3-204ENST00000474190 BRCA1P38398 1863 aaKnown RBP12.95□□□□□ -0.34
CASC3-204ENST00000474190 SLX4Q8IY92 1834 aa12.95□□□□□ -0.34
CASC3-204ENST00000474190 DUOX1Q9NRD9 1551 aa12.94□□□□□ -0.34
CASC3-204ENST00000474190 NFKBIEO00221 500 aa12.94□□□□□ -0.34
CASC3-204ENST00000474190 PPEF1O14829 653 aaPredicted RBP12.94□□□□□ -0.34
CASC3-204ENST00000474190 C21orf2O43822 256 aa12.94□□□□□ -0.34
CASC3-204ENST00000474190 SASH1O94885 1247 aa12.94□□□□□ -0.34
CASC3-204ENST00000474190 ALDH1B1P30837 517 aa12.94□□□□□ -0.34
CASC3-204ENST00000474190 CCDC57Q2TAC2 916 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms