RNA–Protein interactions for RNA: ENST00000473550.1

DUBR-203, DPPA2 upstream binding RNA, humanhuman

TSL 3 BASIC

Gene DUBR, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-203ENST00000473550 IRS4O14654 1257 aaPredicted RBP12.05□□□□□ -0.48
DUBR-203ENST00000473550 SUSD4Q5VX71 490 aa12.05□□□□□ -0.48
DUBR-203ENST00000473550 CHRDL2Q6WN34 429 aa12.05□□□□□ -0.48
DUBR-203ENST00000473550 KAZALD1Q96I82 304 aa12.05□□□□□ -0.48
DUBR-203ENST00000473550 BCL2L12Q9HB09 334 aa12.05□□□□□ -0.48
DUBR-203ENST00000473550 NOP58Q9Y2X3 529 aaKnown RBP12.05□□□□□ -0.48
DUBR-203ENST00000473550 RIC1Q4ADV7 1423 aa12.04□□□□□ -0.48
DUBR-203ENST00000473550 NTSR2O95665 410 aa12.04□□□□□ -0.48
DUBR-203ENST00000473550 CSF1RP07333 972 aa12.04□□□□□ -0.48
DUBR-203ENST00000473550 GYS1P13807 737 aa12.04□□□□□ -0.48
DUBR-203ENST00000473550 GTF2E1P29083 439 aaPredicted RBP12.04□□□□□ -0.48
DUBR-203ENST00000473550 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.48
DUBR-203ENST00000473550 FOXO4P98177 505 aa12.04□□□□□ -0.48
DUBR-203ENST00000473550 ZNF827Q17R98 1081 aa12.04□□□□□ -0.48
DUBR-203ENST00000473550 SLC10A5Q5PT55 438 aa12.04□□□□□ -0.48
DUBR-203ENST00000473550 TBC1D9BQ66K14 1250 aa12.04□□□□□ -0.48
DUBR-203ENST00000473550 NBPF5PQ86XG9 351 aaPredicted RBP12.04□□□□□ -0.48
DUBR-203ENST00000473550 SLC16A10Q8TF71 515 aa12.04□□□□□ -0.48
DUBR-203ENST00000473550 FAM89AQ96GI7 184 aa12.04□□□□□ -0.48
DUBR-203ENST00000473550 SRP68Q9UHB9 627 aaKnown RBP12.04□□□□□ -0.48
DUBR-203ENST00000473550 RTL9Q8NET4 1388 aa12.04□□□□□ -0.48
DUBR-203ENST00000473550 PNMA6EA0A0J9YXQ4 647 aa12.03□□□□□ -0.48
DUBR-203ENST00000473550 NUCB1Q02818 461 aa12.03□□□□□ -0.48
DUBR-203ENST00000473550 CCDC57Q2TAC2 916 aa12.03□□□□□ -0.48
DUBR-203ENST00000473550 LMBR1LQ6UX01 489 aa12.03□□□□□ -0.48
DUBR-203ENST00000473550 COPRSQ9NQ92 184 aa12.03□□□□□ -0.48
DUBR-203ENST00000473550 MYH3P11055 1940 aa12.03□□□□□ -0.48
DUBR-203ENST00000473550 EP400Q96L91 3159 aa12.02□□□□□ -0.48
DUBR-203ENST00000473550 SURF6O75683 361 aaKnown RBP12.02□□□□□ -0.49
DUBR-203ENST00000473550 TM4SF1P30408 202 aa12.02□□□□□ -0.49
DUBR-203ENST00000473550 CTSWP56202 376 aa12.02□□□□□ -0.49
DUBR-203ENST00000473550 G3BP1Q13283 466 aaKnown RBP eCLIP12.02□□□□□ -0.49
DUBR-203ENST00000473550 CCDC152Q4G0S7 254 aa12.02□□□□□ -0.49
DUBR-203ENST00000473550 CHD1LQ86WJ1 897 aa12.02□□□□□ -0.49
DUBR-203ENST00000473550 COL23A1Q86Y22 540 aaPredicted RBP12.02□□□□□ -0.49
DUBR-203ENST00000473550 KIF1BPQ96EK5 621 aa12.02□□□□□ -0.49
DUBR-203ENST00000473550 LRRCC1Q9C099 1032 aa12.02□□□□□ -0.49
DUBR-203ENST00000473550 FARP1Q9Y4F1 1045 aaPredicted RBP12.02□□□□□ -0.49
DUBR-203ENST00000473550 PNPLA7Q6ZV29 1317 aa12.02□□□□□ -0.49
DUBR-203ENST00000473550 TUBGCP6Q96RT7 1819 aa12.02□□□□□ -0.49
DUBR-203ENST00000473550 NPHP1O15259 732 aa12.01□□□□□ -0.49
DUBR-203ENST00000473550 PRKAR2AP13861 404 aaKnown RBP12.01□□□□□ -0.49
DUBR-203ENST00000473550 ST5P78524 1137 aa12.01□□□□□ -0.49
DUBR-203ENST00000473550 IFIT5Q13325 482 aaKnown RBP12.01□□□□□ -0.49
DUBR-203ENST00000473550 NFIXQ14938 502 aa12.01□□□□□ -0.49
DUBR-203ENST00000473550 ANKRD45Q5TZF3 282 aa12.01□□□□□ -0.49
DUBR-203ENST00000473550 DEFB132Q7Z7B7 95 aa12.01□□□□□ -0.49
DUBR-203ENST00000473550 AMIGO3Q86WK7 504 aa12.01□□□□□ -0.49
DUBR-203ENST00000473550 TTLL11Q8NHH1 800 aa12.01□□□□□ -0.49
DUBR-203ENST00000473550 NLRP3Q96P20 1036 aa12.01□□□□□ -0.49
DUBR-203ENST00000473550 ANKRD18BA2A2Z9 1011 aa12□□□□□ -0.49
DUBR-203ENST00000473550 CIAO1O76071 339 aa12□□□□□ -0.49
DUBR-203ENST00000473550 OS9Q13438 667 aaPredicted RBP12□□□□□ -0.49
DUBR-203ENST00000473550 SF3B3Q15393 1217 aaKnown RBP12□□□□□ -0.49
DUBR-203ENST00000473550 TAF7LQ5H9L4 462 aa12□□□□□ -0.49
DUBR-203ENST00000473550 RTL5Q5HYW3 569 aaPredicted RBP12□□□□□ -0.49
DUBR-203ENST00000473550 EPHA10Q5JZY3 1008 aa12□□□□□ -0.49
DUBR-203ENST00000473550 BICDL1Q6ZP65 573 aa12□□□□□ -0.49
DUBR-203ENST00000473550 CNBD1Q8NA66 436 aa12□□□□□ -0.49
DUBR-203ENST00000473550 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.49
DUBR-203ENST00000473550 PDZRN3Q9UPQ7 1066 aa12□□□□□ -0.49
DUBR-203ENST00000473550 CHMP3Q9Y3E7 222 aa12□□□□□ -0.49
DUBR-203ENST00000473550 DDX60Q8IY21 1712 aaKnown RBP12□□□□□ -0.49
DUBR-203ENST00000473550 SERPINB2P05120 415 aa11.99□□□□□ -0.49
DUBR-203ENST00000473550 CHRM1P11229 460 aaPredicted RBP11.99□□□□□ -0.49
DUBR-203ENST00000473550 IL15P40933 162 aaPredicted RBP11.99□□□□□ -0.49
DUBR-203ENST00000473550 RFX5P48382 616 aaPredicted RBP11.99□□□□□ -0.49
DUBR-203ENST00000473550 FAM177BA6PVY3 158 aa11.98□□□□□ -0.49
DUBR-203ENST00000473550 PTPN12Q05209 780 aaKnown RBP11.98□□□□□ -0.49
DUBR-203ENST00000473550 ERFEQ4G0M1 354 aa11.98□□□□□ -0.49
DUBR-203ENST00000473550 CHADLQ6NUI6 762 aa11.98□□□□□ -0.49
DUBR-203ENST00000473550 CLASRPQ8N2M8 674 aaKnown RBP11.98□□□□□ -0.49
DUBR-203ENST00000473550 RHPN1Q8TCX5 695 aa11.98□□□□□ -0.49
DUBR-203ENST00000473550 JARID2Q92833 1246 aaPredicted RBP11.98□□□□□ -0.49
DUBR-203ENST00000473550 CDC5LQ99459 802 aaKnown RBP11.98□□□□□ -0.49
DUBR-203ENST00000473550 ANO8Q9HCE9 1232 aaPredicted RBP11.98□□□□□ -0.49
DUBR-203ENST00000473550 EXOC6BQ9Y2D4 811 aa11.98□□□□□ -0.49
DUBR-203ENST00000473550 PARP3Q9Y6F1 533 aa11.98□□□□□ -0.49
DUBR-203ENST00000473550 NRXN2Q9P2S2 1712 aa11.97□□□□□ -0.49
DUBR-203ENST00000473550 EYA2O00167 538 aa11.97□□□□□ -0.49
DUBR-203ENST00000473550 POLRMTO00411 1230 aaKnown RBP11.97□□□□□ -0.49
DUBR-203ENST00000473550 HCLS1P14317 486 aaPredicted RBP11.97□□□□□ -0.49
DUBR-203ENST00000473550 ITGA6P23229 1130 aa11.97□□□□□ -0.49
DUBR-203ENST00000473550 SMIM5Q71RC9 77 aa11.97□□□□□ -0.49
DUBR-203ENST00000473550 NUTM1Q86Y26 1132 aa11.97□□□□□ -0.49
DUBR-203ENST00000473550 RASEFQ8IZ41 740 aa11.97□□□□□ -0.49
DUBR-203ENST00000473550 GPR108Q9NPR9 543 aa11.97□□□□□ -0.49
DUBR-203ENST00000473550 IGHMBP2P38935 993 aaKnown RBP11.96□□□□□ -0.49
DUBR-203ENST00000473550 FAM161AQ3B820 660 aa11.96□□□□□ -0.49
DUBR-203ENST00000473550 PRR5LQ6MZQ0 368 aa11.96□□□□□ -0.49
DUBR-203ENST00000473550 GPATCH3Q96I76 525 aa11.96□□□□□ -0.49
DUBR-203ENST00000473550 BRIP1Q9BX63 1249 aa11.96□□□□□ -0.49
DUBR-203ENST00000473550 LNPKQ9C0E8 428 aa11.96□□□□□ -0.49
DUBR-203ENST00000473550 AKAP2Q9Y2D5 859 aa11.96□□□□□ -0.49
DUBR-203ENST00000473550 AOX1Q06278 1338 aa11.95□□□□□ -0.5
DUBR-203ENST00000473550 MROH5Q6ZUA9 1318 aa11.95□□□□□ -0.5
DUBR-203ENST00000473550 PDE6BP35913 854 aa11.95□□□□□ -0.5
DUBR-203ENST00000473550 LDHAL6AQ6ZMR3 332 aa11.95□□□□□ -0.5
DUBR-203ENST00000473550 DDX46Q7L014 1031 aaKnown RBP11.95□□□□□ -0.5
DUBR-203ENST00000473550 TMC4Q7Z404 712 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms