RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 ANKIB1Q9P2G1 1089 aa11.67□□□□□ -0.54
A1CF-209ENST00000473480 C9orf84Q5VXU9 1444 aa11.67□□□□□ -0.54
A1CF-209ENST00000473480 CPS1P31327 1500 aa11.66□□□□□ -0.54
A1CF-209ENST00000473480 FAM157BP0CG42 384 aa11.66□□□□□ -0.54
A1CF-209ENST00000473480 NGLY1Q96IV0 654 aa11.66□□□□□ -0.54
A1CF-209ENST00000473480 HECW1Q76N89 1606 aa11.65□□□□□ -0.54
A1CF-209ENST00000473480 MAP2K3P46734 347 aa11.65□□□□□ -0.54
A1CF-209ENST00000473480 TNP2Q05952 138 aa11.65□□□□□ -0.54
A1CF-209ENST00000473480 HIF1AQ16665 826 aa11.65□□□□□ -0.54
A1CF-209ENST00000473480 VTI1AQ96AJ9 217 aa11.65□□□□□ -0.54
A1CF-209ENST00000473480 ATP10BO94823 1461 aa11.64□□□□□ -0.55
A1CF-209ENST00000473480 CFAP74Q9C0B2 1584 aa11.64□□□□□ -0.55
A1CF-209ENST00000473480 DCDC2BA2VCK2 349 aa11.64□□□□□ -0.55
A1CF-209ENST00000473480 KHNYNO15037 678 aaKnown RBP11.64□□□□□ -0.55
A1CF-209ENST00000473480 MAPTP10636 758 aaKnown RBP11.64□□□□□ -0.55
A1CF-209ENST00000473480 RTN1Q16799 776 aa11.64□□□□□ -0.55
A1CF-209ENST00000473480 PRMT3O60678 531 aa11.63□□□□□ -0.55
A1CF-209ENST00000473480 PRIMPOLQ96LW4 560 aa11.63□□□□□ -0.55
A1CF-209ENST00000473480 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.63□□□□□ -0.55
A1CF-209ENST00000473480 BMP4P12644 408 aa11.62□□□□□ -0.55
A1CF-209ENST00000473480 OCLNQ16625 522 aa11.62□□□□□ -0.55
A1CF-209ENST00000473480 SVOPQ8N4V2 548 aa11.62□□□□□ -0.55
A1CF-209ENST00000473480 KLRG1Q96E93 195 aa11.62□□□□□ -0.55
A1CF-209ENST00000473480 SUSD3Q96L08 255 aa11.62□□□□□ -0.55
A1CF-209ENST00000473480 PLA2R1Q13018 1463 aa11.62□□□□□ -0.55
A1CF-209ENST00000473480 CTBSQ01459 385 aa11.61□□□□□ -0.55
A1CF-209ENST00000473480 LAMC2Q13753 1193 aa11.61□□□□□ -0.55
A1CF-209ENST00000473480 ZNF385CQ66K41 422 aaPredicted RBP11.61□□□□□ -0.55
A1CF-209ENST00000473480 CLP1Q92989 425 aaKnown RBP11.61□□□□□ -0.55
A1CF-209ENST00000473480 HSH2DQ96JZ2 352 aa11.61□□□□□ -0.55
A1CF-209ENST00000473480 GOLGA3Q08378 1498 aa11.61□□□□□ -0.55
A1CF-209ENST00000473480 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
A1CF-209ENST00000473480 TCOF1Q13428 1488 aaKnown RBP11.6□□□□□ -0.55
A1CF-209ENST00000473480 RAPGEF2Q9Y4G8 1499 aa11.6□□□□□ -0.55
A1CF-209ENST00000473480 EFSO43281 561 aa11.6□□□□□ -0.55
A1CF-209ENST00000473480 FKBP5Q13451 457 aaPredicted RBP11.6□□□□□ -0.55
A1CF-209ENST00000473480 FAM182BQ5T319 152 aa11.6□□□□□ -0.55
A1CF-209ENST00000473480 WHAMMQ8TF30 809 aa11.6□□□□□ -0.55
A1CF-209ENST00000473480 SHANK2Q9UPX8 1470 aa11.59□□□□□ -0.55
A1CF-209ENST00000473480 CD33P20138 364 aa11.59□□□□□ -0.55
A1CF-209ENST00000473480 MAP3K10Q02779 954 aa11.59□□□□□ -0.55
A1CF-209ENST00000473480 LYPD4Q6UWN0 246 aa11.59□□□□□ -0.55
A1CF-209ENST00000473480 ZNF280CQ8ND82 737 aa11.59□□□□□ -0.55
A1CF-209ENST00000473480 ACDQ96AP0 544 aa11.59□□□□□ -0.55
A1CF-209ENST00000473480 OXCT2Q9BYC2 517 aaPredicted RBP11.59□□□□□ -0.55
A1CF-209ENST00000473480 MARK1Q9P0L2 795 aa11.59□□□□□ -0.55
A1CF-209ENST00000473480 C2CD2LO14523 706 aa11.58□□□□□ -0.56
A1CF-209ENST00000473480 CELA2BP08218 269 aaPredicted RBP11.58□□□□□ -0.56
A1CF-209ENST00000473480 ARID3AQ99856 593 aa11.58□□□□□ -0.56
A1CF-209ENST00000473480 CXXC1Q9P0U4 656 aaPredicted RBP11.58□□□□□ -0.56
A1CF-209ENST00000473480 SUPT6HQ7KZ85 1726 aaKnown RBP11.57□□□□□ -0.56
A1CF-209ENST00000473480 CEP63Q96MT8 703 aa11.57□□□□□ -0.56
A1CF-209ENST00000473480 QTRT2Q9H974 415 aaKnown RBP11.57□□□□□ -0.56
A1CF-209ENST00000473480 LRRC4BQ9NT99 713 aa11.57□□□□□ -0.56
A1CF-209ENST00000473480 HCN2Q9UL51 889 aa11.57□□□□□ -0.56
A1CF-209ENST00000473480 NPATQ14207 1427 aa11.57□□□□□ -0.56
A1CF-209ENST00000473480 BCRP11274 1271 aa11.56□□□□□ -0.56
A1CF-209ENST00000473480 IER5Q5VY09 327 aa11.56□□□□□ -0.56
A1CF-209ENST00000473480 MYO19Q96H55 970 aa11.56□□□□□ -0.56
A1CF-209ENST00000473480 GDF2Q9UK05 429 aaPredicted RBP11.56□□□□□ -0.56
A1CF-209ENST00000473480 SCAPERQ9BY12 1400 aa11.55□□□□□ -0.56
A1CF-209ENST00000473480 TGFBR3LH3BV60 316 aa11.55□□□□□ -0.56
A1CF-209ENST00000473480 BTLAQ7Z6A9 289 aa11.55□□□□□ -0.56
A1CF-209ENST00000473480 GOLGA6L1Q8N7Z2 621 aa11.55□□□□□ -0.56
A1CF-209ENST00000473480 COL26A1Q96A83 441 aa11.55□□□□□ -0.56
A1CF-209ENST00000473480 BRD7Q9NPI1 651 aa11.55□□□□□ -0.56
A1CF-209ENST00000473480 STRN4Q9NRL3 753 aa11.55□□□□□ -0.56
A1CF-209ENST00000473480 ENAMQ9NRM1 1142 aa11.55□□□□□ -0.56
A1CF-209ENST00000473480 CNTLNQ9NXG0 1405 aa11.54□□□□□ -0.56
A1CF-209ENST00000473480 ARAFP10398 606 aa11.54□□□□□ -0.56
A1CF-209ENST00000473480 TYRO3Q06418 890 aa11.54□□□□□ -0.56
A1CF-209ENST00000473480 KLK14Q9P0G3 267 aa11.54□□□□□ -0.56
A1CF-209ENST00000473480 PTCD1O75127 700 aaKnown RBP11.53□□□□□ -0.56
A1CF-209ENST00000473480 ARHGEF15O94989 841 aa11.53□□□□□ -0.56
A1CF-209ENST00000473480 ATP2B4P23634 1241 aa11.53□□□□□ -0.56
A1CF-209ENST00000473480 DGKZQ13574 1117 aa11.53□□□□□ -0.56
A1CF-209ENST00000473480 C11orf91Q3C1V1 193 aa11.53□□□□□ -0.56
A1CF-209ENST00000473480 AVENQ9NQS1 362 aaPredicted RBP11.53□□□□□ -0.56
A1CF-209ENST00000473480 PRR12Q9ULL5 1215 aa11.53□□□□□ -0.56
A1CF-209ENST00000473480 TMEM88BA6NKF7 163 aa11.52□□□□□ -0.57
A1CF-209ENST00000473480 KCNQ4P56696 695 aa11.52□□□□□ -0.57
A1CF-209ENST00000473480 SFSWAPQ12872 951 aaKnown RBP11.52□□□□□ -0.57
A1CF-209ENST00000473480 SLAIN2Q9P270 581 aa11.52□□□□□ -0.57
A1CF-209ENST00000473480 BCS1LQ9Y276 419 aa11.52□□□□□ -0.57
A1CF-209ENST00000473480 OIP5O43482 229 aa11.51□□□□□ -0.57
A1CF-209ENST00000473480 MKNK1Q9BUB5 465 aa11.51□□□□□ -0.57
A1CF-209ENST00000473480 GGA1Q9UJY5 639 aa11.51□□□□□ -0.57
A1CF-209ENST00000473480 ADAMTS8Q9UP79 889 aa11.51□□□□□ -0.57
A1CF-209ENST00000473480 KCNH4Q9UQ05 1017 aa11.51□□□□□ -0.57
A1CF-209ENST00000473480 AGLP35573 1532 aa11.5□□□□□ -0.57
A1CF-209ENST00000473480 ZNF142P52746 1687 aaPredicted RBP11.5□□□□□ -0.57
A1CF-209ENST00000473480 ADH6P28332 368 aa11.5□□□□□ -0.57
A1CF-209ENST00000473480 COX20Q5RI15 118 aa11.5□□□□□ -0.57
A1CF-209ENST00000473480 ZNF468Q5VIY5 522 aaPredicted RBP11.5□□□□□ -0.57
A1CF-209ENST00000473480 SLCO4C1Q6ZQN7 724 aa11.5□□□□□ -0.57
A1CF-209ENST00000473480 DMGDHQ9UI17 866 aaKnown RBP11.5□□□□□ -0.57
A1CF-209ENST00000473480 LRFN2Q9ULH4 789 aa11.5□□□□□ -0.57
A1CF-209ENST00000473480 PLEKHD1A6NEE1 506 aa11.49□□□□□ -0.57
A1CF-209ENST00000473480 C16orf46Q6P387 395 aa11.49□□□□□ -0.57
A1CF-209ENST00000473480 SPEM2Q0P670 501 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms