RNA–Protein interactions for RNA: ENST00000473007.7

UBE2D4-210, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-210ENST00000473007 EIF1AXP47813 144 aaKnown RBP5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 PROX2Q3B8N5 592 aa5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 RNF20Q5VTR2 975 aa5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 ALKBH2Q6NS38 261 aa5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 APBB1IPQ7Z5R6 666 aaPredicted RBP5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 CCAR1Q8IX12 1150 aaKnown RBP5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 CCDC146Q8IYE0 955 aa5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 GPKOWQ92917 476 aaPredicted RBP eCLIP5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 KHSRPQ92945 711 aaKnown RBP eCLIP5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 SPOCK3Q9BQ16 436 aa5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 NIF3L1Q9GZT8 377 aa5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 SLC27A5Q9Y2P5 690 aa5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 ZFYVE9O95405 1425 aa5.46□□□□□ -1.54
UBE2D4-210ENST00000473007 KIAA1210Q9ULL0 1709 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 LTBP4Q8N2S1 1624 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 TNRQ92752 1358 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 RAB3GAP2Q9H2M9 1393 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 PNMA6FA0A0J9YX94 578 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 CREB3O43889 395 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 SEC24BO95487 1268 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 PIP4K2BP78356 416 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 AMPD3Q01432 767 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 RALBP1Q15311 655 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 PPP4R3BQ5MIZ7 849 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 GGT6Q6P531 493 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 FMNL3Q8IVF7 1028 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 TEX2Q8IWB9 1127 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 EVI5LQ96CN4 794 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 CFHR5Q9BXR6 569 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 UBA5Q9GZZ9 404 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 PRR12Q9ULL5 1215 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 PRAG1Q86YV5 1406 aa5.45□□□□□ -1.54
UBE2D4-210ENST00000473007 IQGAP1P46940 1657 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 ESPNB1AK53 854 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 CENPBP07199 599 aaPredicted RBP5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 PDGFRBP09619 1106 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 CTHP32929 405 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 TBX4P57082 545 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 PAK2Q13177 524 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 AAMPQ13685 434 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 PTPRNQ16849 979 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 HS2ST1Q7LGA3 356 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 ARMC2Q8NEN0 867 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 FRMD6Q96NE9 622 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 USB1Q9BQ65 265 aaKnown RBP5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 SAP130Q9H0E3 1048 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 TMX1Q9H3N1 280 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 NEUROD4Q9HD90 331 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 RGS17Q9UGC6 210 aaPredicted RBP5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 CLTCL1P53675 1640 aa5.44□□□□□ -1.54
UBE2D4-210ENST00000473007 SETBP1Q9Y6X0 1596 aa5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 GIGYF1O75420 1035 aaPredicted RBP5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 MZF1P28698 734 aaPredicted RBP5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 HDGFP51858 240 aaKnown RBP5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 RHBDL3P58872 404 aa5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 ARSIQ5FYB1 569 aa5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 SPTY2D1Q68D10 685 aaPredicted RBP5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 C16orf46Q6P387 395 aa5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 RNF19BQ6ZMZ0 732 aa5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 THEMISQ8N1K5 641 aaPredicted RBP5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 ARHGAP9Q9BRR9 750 aa5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 TYW1Q9NV66 732 aaKnown RBP5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 GEMIN8Q9NWZ8 242 aaKnown RBP5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 SIRPGQ9P1W8 387 aa5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 KIAA1468Q9P260 1216 aa5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 GGT7Q9UJ14 662 aa5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 CHD2O14647 1828 aaKnown RBP5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 RPGRIP1LQ68CZ1 1315 aa5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 SETD1AO15047 1707 aaKnown RBP5.43□□□□□ -1.54
UBE2D4-210ENST00000473007 PIK3R4Q99570 1358 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 CCDC144AA2RUR9 1427 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 PPFIA4O75335 1185 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 SLC4A3P48751 1232 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 USP4Q13107 963 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 PUS10Q3MIT2 529 aaKnown RBP5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 BLOC1S3Q6QNY0 202 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 ZBTB33Q86T24 672 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 DZIP3Q86Y13 1208 aaKnown RBP5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 FBF1Q8TES7 1133 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 JDP2Q8WYK2 163 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 GPRASP2Q96D09 838 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 DCBLD2Q96PD2 775 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 SRPK1Q96SB4 655 aaKnown RBP5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 SLKQ9H2G2 1235 aaPredicted RBP5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 TERF2IPQ9NYB0 399 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 LHX6Q9UPM6 363 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 MYOM2P54296 1465 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 USP31Q70CQ4 1352 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 ANKRD30BQ9BXX2 1392 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 TMEM2Q9UHN6 1383 aa5.42□□□□□ -1.54
UBE2D4-210ENST00000473007 SPATA31E1Q6ZUB1 1445 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 NRXN1Q9ULB1 1477 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 KNDC1Q76NI1 1749 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 POTEFA5A3E0 1075 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 PRC1O43663 620 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 JUNDP17535 347 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 BIRC2Q13490 618 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 MLECQ14165 292 aa5.41□□□□□ -1.54
UBE2D4-210ENST00000473007 NBPF14Q5TI25 921 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms