RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 DDX60Q8IY21 1712 aaKnown RBP26.2■■□□□ 1.79
TOP3A-204ENST00000472959 GRAPQ13588 217 aa26.2■■□□□ 1.78
TOP3A-204ENST00000472959 ARHGAP27Q6ZUM4 889 aa26.2■■□□□ 1.78
TOP3A-204ENST00000472959 GRAPLQ8TC17 118 aaPredicted RBP26.2■■□□□ 1.78
TOP3A-204ENST00000472959 NBPF7P0C2Y1 421 aaPredicted RBP26.19■■□□□ 1.78
TOP3A-204ENST00000472959 CC2D2BQ6DHV5 1058 aa26.19■■□□□ 1.78
TOP3A-204ENST00000472959 PPEF1O14829 653 aaPredicted RBP26.18■■□□□ 1.78
TOP3A-204ENST00000472959 CSF1RP07333 972 aa26.18■■□□□ 1.78
TOP3A-204ENST00000472959 TMC4Q7Z404 712 aa26.18■■□□□ 1.78
TOP3A-204ENST00000472959 CLUAP1Q96AJ1 413 aa26.18■■□□□ 1.78
TOP3A-204ENST00000472959 ZNF219Q9P2Y4 722 aaPredicted RBP26.18■■□□□ 1.78
TOP3A-204ENST00000472959 RTL9Q8NET4 1388 aa26.18■■□□□ 1.78
TOP3A-204ENST00000472959 LAMB2P55268 1798 aa26.18■■□□□ 1.78
TOP3A-204ENST00000472959 MS4A1P11836 297 aa26.17■■□□□ 1.78
TOP3A-204ENST00000472959 FOXO4P98177 505 aa26.17■■□□□ 1.78
TOP3A-204ENST00000472959 GRIPAP1Q4V328 841 aa26.17■■□□□ 1.78
TOP3A-204ENST00000472959 FTSJ3Q8IY81 847 aaKnown RBP26.17■■□□□ 1.78
TOP3A-204ENST00000472959 DZIP1LQ8IYY4 767 aaKnown RBP26.17■■□□□ 1.78
TOP3A-204ENST00000472959 TMX4Q9H1E5 349 aaPredicted RBP26.17■■□□□ 1.78
TOP3A-204ENST00000472959 GOLGB1Q14789 3259 aaKnown RBP26.16■■□□□ 1.78
TOP3A-204ENST00000472959 CCDC93Q567U6 631 aa26.16■■□□□ 1.78
TOP3A-204ENST00000472959 HDAC5Q9UQL6 1122 aa26.16■■□□□ 1.78
TOP3A-204ENST00000472959 TNNQ9UQP3 1299 aa26.16■■□□□ 1.78
TOP3A-204ENST00000472959 ARFGEF1Q9Y6D6 1849 aa26.16■■□□□ 1.78
TOP3A-204ENST00000472959 RPS8P62241 208 aaKnown RBP26.15■■□□□ 1.78
TOP3A-204ENST00000472959 RTKN2Q8IZC4 609 aa26.15■■□□□ 1.78
TOP3A-204ENST00000472959 CCDC85AQ96PX6 553 aaPredicted RBP26.15■■□□□ 1.78
TOP3A-204ENST00000472959 GREM2Q9H772 168 aa26.15■■□□□ 1.78
TOP3A-204ENST00000472959 ATP6V0A2Q9Y487 856 aa26.15■■□□□ 1.78
TOP3A-204ENST00000472959 SLX4Q8IY92 1834 aa26.15■■□□□ 1.78
TOP3A-204ENST00000472959 SP8Q8IXZ3 490 aa26.14■■□□□ 1.78
TOP3A-204ENST00000472959 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.14■■□□□ 1.78
TOP3A-204ENST00000472959 CELF1Q92879 486 aaKnown RBP26.14■■□□□ 1.78
TOP3A-204ENST00000472959 SUCLG2Q96I99 432 aa26.14■■□□□ 1.78
TOP3A-204ENST00000472959 CDC5LQ99459 802 aaKnown RBP26.14■■□□□ 1.78
TOP3A-204ENST00000472959 SEC31BQ9NQW1 1179 aa26.14■■□□□ 1.78
TOP3A-204ENST00000472959 UBTFL1P0CB47 393 aaPredicted RBP26.13■■□□□ 1.77
TOP3A-204ENST00000472959 EPHA10Q5JZY3 1008 aa26.13■■□□□ 1.77
TOP3A-204ENST00000472959 TMEM57Q8N5G2 664 aa26.13■■□□□ 1.77
TOP3A-204ENST00000472959 LMBR1LQ6UX01 489 aa26.12■■□□□ 1.77
TOP3A-204ENST00000472959 KAZALD1Q96I82 304 aa26.12■■□□□ 1.77
TOP3A-204ENST00000472959 GNAI3P08754 354 aa26.11■■□□□ 1.77
TOP3A-204ENST00000472959 ANKRD18AQ8IVF6 992 aa26.11■■□□□ 1.77
TOP3A-204ENST00000472959 LTBP3Q9NS15 1303 aa26.11■■□□□ 1.77
TOP3A-204ENST00000472959 NFKBIEO00221 500 aa26.1■■□□□ 1.77
TOP3A-204ENST00000472959 ITGA6P23229 1130 aa26.1■■□□□ 1.77
TOP3A-204ENST00000472959 FAM161AQ3B820 660 aa26.1■■□□□ 1.77
TOP3A-204ENST00000472959 RABL6Q3YEC7 729 aaPredicted RBP26.1■■□□□ 1.77
TOP3A-204ENST00000472959 OLFM4Q6UX06 510 aa26.1■■□□□ 1.77
TOP3A-204ENST00000472959 TAOK3Q9H2K8 898 aa26.1■■□□□ 1.77
TOP3A-204ENST00000472959 ANKRD18BA2A2Z9 1011 aa26.09■■□□□ 1.77
TOP3A-204ENST00000472959 RLBP1P12271 317 aa26.09■■□□□ 1.77
TOP3A-204ENST00000472959 IFIT5Q13325 482 aaKnown RBP26.09■■□□□ 1.77
TOP3A-204ENST00000472959 MEIS3Q99687 375 aa26.09■■□□□ 1.77
TOP3A-204ENST00000472959 BICC1Q9H694 974 aaKnown RBP26.09■■□□□ 1.77
TOP3A-204ENST00000472959 CHMP3Q9Y3E7 222 aa26.09■■□□□ 1.77
TOP3A-204ENST00000472959 PLIN1O60240 522 aa26.07■■□□□ 1.76
TOP3A-204ENST00000472959 IGHMBP2P38935 993 aaKnown RBP26.07■■□□□ 1.76
TOP3A-204ENST00000472959 FKBP4Q02790 459 aaKnown RBP eCLIP26.07■■□□□ 1.76
TOP3A-204ENST00000472959 CCDC57Q2TAC2 916 aa26.07■■□□□ 1.76
TOP3A-204ENST00000472959 ITPRIPQ8IWB1 547 aa26.07■■□□□ 1.76
TOP3A-204ENST00000472959 ANKRD44Q8N8A2 993 aa26.07■■□□□ 1.76
TOP3A-204ENST00000472959 PANK1Q8TE04 598 aa26.07■■□□□ 1.76
TOP3A-204ENST00000472959 PSMD1Q99460 953 aa26.07■■□□□ 1.76
TOP3A-204ENST00000472959 BSDC1Q9NW68 430 aaPredicted RBP26.07■■□□□ 1.76
TOP3A-204ENST00000472959 LMNB1P20700 586 aa26.06■■□□□ 1.76
TOP3A-204ENST00000472959 RASSF7Q02833 373 aa26.06■■□□□ 1.76
TOP3A-204ENST00000472959 PDE3AQ14432 1141 aa26.06■■□□□ 1.76
TOP3A-204ENST00000472959 UTRNP46939 3433 aa26.06■■□□□ 1.76
TOP3A-204ENST00000472959 SNED1Q8TER0 1413 aa26.05■■□□□ 1.76
TOP3A-204ENST00000472959 MYH3P11055 1940 aa26.04■■□□□ 1.76
TOP3A-204ENST00000472959 MPNDQ8N594 471 aa26.04■■□□□ 1.76
TOP3A-204ENST00000472959 MPHOSPH8Q99549 860 aa26.04■■□□□ 1.76
TOP3A-204ENST00000472959 LRRFIP2Q9Y608 721 aaKnown RBP26.04■■□□□ 1.76
TOP3A-204ENST00000472959 C9orf131Q5VYM1 1079 aa26.03■■□□□ 1.76
TOP3A-204ENST00000472959 DPP8Q6V1X1 898 aaPredicted RBP26.03■■□□□ 1.76
TOP3A-204ENST00000472959 CACNA1SQ13698 1873 aa26.02■■□□□ 1.76
TOP3A-204ENST00000472959 ZBTB7BO15156 539 aaPredicted RBP26.02■■□□□ 1.76
TOP3A-204ENST00000472959 GNAI2P04899 355 aa26.02■■□□□ 1.76
TOP3A-204ENST00000472959 TAF7LQ5H9L4 462 aa26.02■■□□□ 1.76
TOP3A-204ENST00000472959 SLC51AQ86UW1 340 aa26.02■■□□□ 1.76
TOP3A-204ENST00000472959 SUPT20HQ8NEM7 779 aa26.02■■□□□ 1.76
TOP3A-204ENST00000472959 RTFDC1Q9BY42 306 aaPredicted RBP26.02■■□□□ 1.76
TOP3A-204ENST00000472959 RNF181Q9P0P0 153 aa26.01■■□□□ 1.75
TOP3A-204ENST00000472959 NSFL1CQ9UNZ2 370 aaKnown RBP26.01■■□□□ 1.75
TOP3A-204ENST00000472959 COL4A1P02462 1669 aa26■■□□□ 1.75
TOP3A-204ENST00000472959 PRELPP51888 382 aa26■■□□□ 1.75
TOP3A-204ENST00000472959 MVPQ14764 893 aaKnown RBP26■■□□□ 1.75
TOP3A-204ENST00000472959 VPS33BQ9H267 617 aa26■■□□□ 1.75
TOP3A-204ENST00000472959 PODXL2Q9NZ53 605 aa26■■□□□ 1.75
TOP3A-204ENST00000472959 FER1L6Q2WGJ9 1857 aa26■■□□□ 1.75
TOP3A-204ENST00000472959 GPSM2P81274 684 aa25.99■■□□□ 1.75
TOP3A-204ENST00000472959 CHMP4BQ9H444 224 aaKnown RBP25.99■■□□□ 1.75
TOP3A-204ENST00000472959 ZNF277Q9NRM2 450 aaPredicted RBP25.99■■□□□ 1.75
TOP3A-204ENST00000472959 ANKIB1Q9P2G1 1089 aa25.99■■□□□ 1.75
TOP3A-204ENST00000472959 DDX19BQ9UMR2 479 aa25.99■■□□□ 1.75
TOP3A-204ENST00000472959 MINPP1Q9UNW1 487 aa25.99■■□□□ 1.75
TOP3A-204ENST00000472959 TAF1P21675 1872 aa25.98■■□□□ 1.75
TOP3A-204ENST00000472959 RRP1P56182 461 aaKnown RBP25.98■■□□□ 1.75
TOP3A-204ENST00000472959 LDHAL6AQ6ZMR3 332 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms