RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 SDSP20132 328 aa17.89■□□□□ 0.45
HIF3A-206ENST00000472815 KLHDC4Q8TBB5 520 aa17.89■□□□□ 0.45
HIF3A-206ENST00000472815 TRAPPC3LQ5T215 181 aa17.88■□□□□ 0.45
HIF3A-206ENST00000472815 DDRGK1Q96HY6 314 aa17.88■□□□□ 0.45
HIF3A-206ENST00000472815 NYXQ9GZU5 481 aa17.88■□□□□ 0.45
HIF3A-206ENST00000472815 ECHDC1Q9NTX5 307 aa17.88■□□□□ 0.45
HIF3A-206ENST00000472815 ANKRD18BA2A2Z9 1011 aa17.87■□□□□ 0.45
HIF3A-206ENST00000472815 EYA2O00167 538 aa17.87■□□□□ 0.45
HIF3A-206ENST00000472815 RFC4P35249 363 aa17.87■□□□□ 0.45
HIF3A-206ENST00000472815 EN1Q05925 392 aaPredicted RBP17.87■□□□□ 0.45
HIF3A-206ENST00000472815 TXNRD1Q16881 649 aa17.87■□□□□ 0.45
HIF3A-206ENST00000472815 SUSD4Q5VX71 490 aa17.87■□□□□ 0.45
HIF3A-206ENST00000472815 TBC1D9Q6ZT07 1266 aa17.87■□□□□ 0.45
HIF3A-206ENST00000472815 TRIM6-TRIM34B2RNG4 842 aa17.86■□□□□ 0.45
HIF3A-206ENST00000472815 TTLL11Q8NHH1 800 aa17.86■□□□□ 0.45
HIF3A-206ENST00000472815 CAMKK2Q96RR4 588 aa17.86■□□□□ 0.45
HIF3A-206ENST00000472815 GPR108Q9NPR9 543 aa17.86■□□□□ 0.45
HIF3A-206ENST00000472815 C4AP0C0L4 1744 aa17.86■□□□□ 0.45
HIF3A-206ENST00000472815 MFAP1P55081 439 aaKnown RBP17.86■□□□□ 0.45
HIF3A-206ENST00000472815 CNTROBQ8N137 903 aa17.86■□□□□ 0.45
HIF3A-206ENST00000472815 SEC24BO95487 1268 aa17.85■□□□□ 0.45
HIF3A-206ENST00000472815 NTSR2O95665 410 aa17.85■□□□□ 0.45
HIF3A-206ENST00000472815 USPL1Q5W0Q7 1092 aa17.85■□□□□ 0.45
HIF3A-206ENST00000472815 SETDB2Q96T68 719 aa17.85■□□□□ 0.45
HIF3A-206ENST00000472815 UBR3Q6ZT12 1888 aa17.85■□□□□ 0.45
HIF3A-206ENST00000472815 ITGA6P23229 1130 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 SSFA2P28290 1259 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 GTF2E1P29083 439 aaPredicted RBP17.84■□□□□ 0.45
HIF3A-206ENST00000472815 TFCP2Q12800 502 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 CCDC152Q4G0S7 254 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 TNNI3KQ59H18 835 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 DEFB132Q7Z7B7 95 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 DDX60Q8IY21 1712 aaKnown RBP17.84■□□□□ 0.45
HIF3A-206ENST00000472815 PROM2Q8N271 834 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 PI4K2BQ8TCG2 481 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 ARHGEF1Q92888 912 aaKnown RBP17.84■□□□□ 0.45
HIF3A-206ENST00000472815 RILPL2Q969X0 211 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 EAF2Q96CJ1 260 aaPredicted RBP17.84■□□□□ 0.45
HIF3A-206ENST00000472815 LRRC4BQ9NT99 713 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 AKAP2Q9Y2D5 859 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 FPGT-TNNI3KV9GXZ4 949 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 EZH2Q15910 746 aaKnown RBP17.84■□□□□ 0.45
HIF3A-206ENST00000472815 TSHZ3Q63HK5 1081 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 CEP126Q9P2H0 1117 aa17.84■□□□□ 0.45
HIF3A-206ENST00000472815 COL24A1Q17RW2 1714 aa17.83■□□□□ 0.45
HIF3A-206ENST00000472815 FAM177BA6PVY3 158 aa17.83■□□□□ 0.44
HIF3A-206ENST00000472815 ATG9AQ7Z3C6 839 aa17.83■□□□□ 0.44
HIF3A-206ENST00000472815 TBC1D32Q96NH3 1257 aa17.83■□□□□ 0.44
HIF3A-206ENST00000472815 REC8O95072 547 aa17.82■□□□□ 0.44
HIF3A-206ENST00000472815 SYNE4Q8N205 404 aa17.82■□□□□ 0.44
HIF3A-206ENST00000472815 IPO9Q96P70 1041 aaKnown RBP17.82■□□□□ 0.44
HIF3A-206ENST00000472815 C22orf23Q9BZE7 217 aa17.82■□□□□ 0.44
HIF3A-206ENST00000472815 GREM2Q9H772 168 aa17.82■□□□□ 0.44
HIF3A-206ENST00000472815 RTL9Q8NET4 1388 aa17.82■□□□□ 0.44
HIF3A-206ENST00000472815 PHF14O94880 888 aa17.81■□□□□ 0.44
HIF3A-206ENST00000472815 LDHAL6AQ6ZMR3 332 aa17.81■□□□□ 0.44
HIF3A-206ENST00000472815 ZNF594Q96JF6 807 aaPredicted RBP17.81■□□□□ 0.44
HIF3A-206ENST00000472815 CCDC8Q9H0W5 538 aaPredicted RBP17.81■□□□□ 0.44
HIF3A-206ENST00000472815 HCLS1P14317 486 aaPredicted RBP17.81■□□□□ 0.44
HIF3A-206ENST00000472815 TBC1D9BQ66K14 1250 aa17.81■□□□□ 0.44
HIF3A-206ENST00000472815 TPTE2Q6XPS3 522 aa17.81■□□□□ 0.44
HIF3A-206ENST00000472815 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
HIF3A-206ENST00000472815 BCL2L12Q9HB09 334 aa17.81■□□□□ 0.44
HIF3A-206ENST00000472815 CNNM1Q9NRU3 951 aa17.81■□□□□ 0.44
HIF3A-206ENST00000472815 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.8■□□□□ 0.44
HIF3A-206ENST00000472815 LRRC24Q50LG9 513 aa17.8■□□□□ 0.44
HIF3A-206ENST00000472815 BICDL1Q6ZP65 573 aa17.8■□□□□ 0.44
HIF3A-206ENST00000472815 NBPF5PQ86XG9 351 aaPredicted RBP17.8■□□□□ 0.44
HIF3A-206ENST00000472815 SRP68Q9UHB9 627 aaKnown RBP17.8■□□□□ 0.44
HIF3A-206ENST00000472815 CARMIL3Q8ND23 1372 aa17.79■□□□□ 0.44
HIF3A-206ENST00000472815 NPHP1O15259 732 aa17.79■□□□□ 0.44
HIF3A-206ENST00000472815 EVI5LQ96CN4 794 aa17.79■□□□□ 0.44
HIF3A-206ENST00000472815 ZNF609O15014 1411 aa17.79■□□□□ 0.44
HIF3A-206ENST00000472815 QSER1Q2KHR3 1735 aa17.79■□□□□ 0.44
HIF3A-206ENST00000472815 HIP1O00291 1037 aa17.78■□□□□ 0.44
HIF3A-206ENST00000472815 NEUROD6Q96NK8 337 aa17.78■□□□□ 0.44
HIF3A-206ENST00000472815 CDC5LQ99459 802 aaKnown RBP17.78■□□□□ 0.44
HIF3A-206ENST00000472815 MPHOSPH8Q99549 860 aa17.78■□□□□ 0.44
HIF3A-206ENST00000472815 DAXXQ9UER7 740 aaPredicted RBP17.78■□□□□ 0.44
HIF3A-206ENST00000472815 ATP5JP18859 108 aa17.78■□□□□ 0.44
HIF3A-206ENST00000472815 IGHMBP2P38935 993 aaKnown RBP17.78■□□□□ 0.44
HIF3A-206ENST00000472815 METTL24Q5JXM2 366 aa17.78■□□□□ 0.44
HIF3A-206ENST00000472815 SLC10A5Q5PT55 438 aa17.78■□□□□ 0.44
HIF3A-206ENST00000472815 DBNLQ9UJU6 430 aaKnown RBP17.78■□□□□ 0.44
HIF3A-206ENST00000472815 LRP5O75197 1615 aa17.78■□□□□ 0.44
HIF3A-206ENST00000472815 MROH5Q6ZUA9 1318 aa17.77■□□□□ 0.44
HIF3A-206ENST00000472815 ERFEQ4G0M1 354 aa17.77■□□□□ 0.44
HIF3A-206ENST00000472815 FLAD1Q8NFF5 587 aa17.77■□□□□ 0.44
HIF3A-206ENST00000472815 RUFY2Q8WXA3 655 aa17.77■□□□□ 0.44
HIF3A-206ENST00000472815 PUS3Q9BZE2 481 aaKnown RBP17.77■□□□□ 0.44
HIF3A-206ENST00000472815 RIPOR2Q9Y4F9 1068 aa17.77■□□□□ 0.44
HIF3A-206ENST00000472815 A0A1B0GUL7 405 aa17.76■□□□□ 0.43
HIF3A-206ENST00000472815 CHMLP26374 656 aa17.76■□□□□ 0.43
HIF3A-206ENST00000472815 RBM25P49756 843 aaKnown RBP17.76■□□□□ 0.43
HIF3A-206ENST00000472815 SF3B3Q15393 1217 aaKnown RBP17.76■□□□□ 0.43
HIF3A-206ENST00000472815 NLRP3Q96P20 1036 aa17.76■□□□□ 0.43
HIF3A-206ENST00000472815 TLR7Q9NYK1 1049 aaKnown RBP17.76■□□□□ 0.43
HIF3A-206ENST00000472815 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.76■□□□□ 0.43
HIF3A-206ENST00000472815 CASZ1Q86V15 1759 aa17.75■□□□□ 0.43
HIF3A-206ENST00000472815 CCDC158Q5M9N0 1113 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms