RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 LAPTM4BQ86VI4 370 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 ARMC2Q8NEN0 867 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 SPON2Q9BUD6 331 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 C12orf49Q9H741 205 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 CNTN3Q9P232 1028 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 GOLGA8CPA6NN73 597 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 MYCP01106 439 aaPredicted RBP3.73□□□□□ -1.81
XRN1-210ENST00000472697 ANAPC15P60006 121 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 GNL2Q13823 731 aaKnown RBP3.73□□□□□ -1.81
XRN1-210ENST00000472697 CBX2Q14781 532 aaPredicted RBP3.73□□□□□ -1.81
XRN1-210ENST00000472697 TLR1Q15399 786 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 CTC1Q2NKJ3 1217 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 PPP1R26Q5T8A7 1209 aaPredicted RBP3.73□□□□□ -1.81
XRN1-210ENST00000472697 RASIP1Q5U651 963 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 RNF20Q5VTR2 975 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 CC2D2BQ6DHV5 1058 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 ALG1LQ6GMV1 187 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 C3orf58Q8NDZ4 430 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 SLC4A9Q96Q91 983 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 DEPDC7Q96QD5 511 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 BCO2Q9BYV7 579 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 KANSL3Q9P2N6 904 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 PFDN2Q9UHV9 154 aa3.73□□□□□ -1.81
XRN1-210ENST00000472697 DIAPH1O60610 1272 aaKnown RBP3.72□□□□□ -1.81
XRN1-210ENST00000472697 ITGBL1O95965 494 aaPredicted RBP3.72□□□□□ -1.81
XRN1-210ENST00000472697 XRCC5P13010 732 aaKnown RBP3.72□□□□□ -1.81
XRN1-210ENST00000472697 EIF4BP23588 611 aaKnown RBP3.72□□□□□ -1.81
XRN1-210ENST00000472697 HSD3B2P26439 372 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 GYS2P54840 703 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 PTPN12Q05209 780 aaKnown RBP3.72□□□□□ -1.81
XRN1-210ENST00000472697 C7orf43Q8WVR3 580 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 HHIPQ96QV1 700 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 ZNF395Q9H8N7 513 aaPredicted RBP3.72□□□□□ -1.81
XRN1-210ENST00000472697 TSR3Q9UJK0 312 aaKnown RBP3.72□□□□□ -1.81
XRN1-210ENST00000472697 CCDC194A0A1B0GVG4 234 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 PAGE1O75459 146 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 TRIM37O94972 964 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 ADH1BP00325 375 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 SSBP05455 408 aaKnown RBP eCLIP3.72□□□□□ -1.81
XRN1-210ENST00000472697 CELA3AP09093 270 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 TRIM32Q13049 653 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 MTFR1Q15390 333 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 TAF1CQ15572 869 aaPredicted RBP3.72□□□□□ -1.81
XRN1-210ENST00000472697 RUFY4Q6ZNE9 571 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 C1orf127Q8N9H9 656 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 SGSM3Q96HU1 749 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 CHRDQ9H2X0 955 aa3.72□□□□□ -1.81
XRN1-210ENST00000472697 PSMA6P60900 246 aaKnown RBP3.71□□□□□ -1.82
XRN1-210ENST00000472697 RAB33AQ14088 237 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 GRM2Q14416 872 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 PEAR1Q5VY43 1037 aaPredicted RBP3.71□□□□□ -1.82
XRN1-210ENST00000472697 PODNQ7Z5L7 613 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 GLIS3Q8NEA6 775 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 SLC6A16Q9GZN6 736 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 CABP1Q9NZU7 370 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 CD2APQ9Y5K6 639 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 DCAF1Q9Y4B6 1507 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 TLR3O15455 904 aaKnown RBP3.71□□□□□ -1.82
XRN1-210ENST00000472697 PHKA2P46019 1235 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 TJAP1Q5JTD0 557 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 MPRIPQ6WCQ1 1025 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 NYAP1Q6ZVC0 841 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 ZNF296Q8WUU4 475 aaPredicted RBP3.71□□□□□ -1.82
XRN1-210ENST00000472697 MYO19Q96H55 970 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 CITED4Q96RK1 184 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 STK17AQ9UEE5 414 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 HRH3Q9Y5N1 445 aa3.71□□□□□ -1.82
XRN1-210ENST00000472697 SMAD7O15105 426 aaKnown RBP3.7□□□□□ -1.82
XRN1-210ENST00000472697 ZNF157P51786 506 aaPredicted RBP3.7□□□□□ -1.82
XRN1-210ENST00000472697 TBX4P57082 545 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 ODR4Q5SWX8 454 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 ANKK1Q8NFD2 765 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 LGR4Q9BXB1 951 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 ANTXR1Q9H6X2 564 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 HCN2Q9UL51 889 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 KCNMB2Q9Y691 235 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 SERTM1A2A2V5 107 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 WASLO00401 505 aaPredicted RBP3.7□□□□□ -1.82
XRN1-210ENST00000472697 CPNE3O75131 537 aaKnown RBP3.7□□□□□ -1.82
XRN1-210ENST00000472697 GBP2P32456 591 aaPredicted RBP3.7□□□□□ -1.82
XRN1-210ENST00000472697 POTEAQ6S8J7 498 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 ADAMTSL4Q6UY14 1074 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 TRMT44Q8IYL2 757 aaKnown RBP3.7□□□□□ -1.82
XRN1-210ENST00000472697 MRFAP1L1Q96HT8 127 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 SHDQ96IW2 340 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 ANKIB1Q9P2G1 1089 aa3.7□□□□□ -1.82
XRN1-210ENST00000472697 U2SURPO15042 1029 aaKnown RBP3.69□□□□□ -1.82
XRN1-210ENST00000472697 PRPF3O43395 683 aaKnown RBP3.69□□□□□ -1.82
XRN1-210ENST00000472697 EIF4A3P38919 411 aaKnown RBP3.69□□□□□ -1.82
XRN1-210ENST00000472697 CHMP4BP1P59074 171 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 CCDC85BQ15834 202 aaPredicted RBP3.69□□□□□ -1.82
XRN1-210ENST00000472697 MAP9Q49MG5 647 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 C1orf53Q5VUE5 145 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 TPTE2Q6XPS3 522 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 KIAA0825Q8IV33 1275 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 WDR75Q8IWA0 830 aaKnown RBP3.69□□□□□ -1.82
XRN1-210ENST00000472697 CKAP2LQ8IYA6 745 aa3.69□□□□□ -1.82
XRN1-210ENST00000472697 PRPF38AQ8NAV1 312 aaKnown RBP3.69□□□□□ -1.82
XRN1-210ENST00000472697 FHDC1Q9C0D6 1143 aaPredicted RBP3.69□□□□□ -1.82
XRN1-210ENST00000472697 THOC2Q8NI27 1593 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms