RNA–Protein interactions for RNA: ENST00000472558.6

IFFO1-208, Transcript of intermediate filament family orphan 1, humanhuman

TSL 2

Gene IFFO1, Length 2,571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-208ENST00000472558 ZKSCAN1P17029 563 aaPredicted RBP16.42■□□□□ 0.22
IFFO1-208ENST00000472558 PDCP20941 246 aa16.42■□□□□ 0.22
IFFO1-208ENST00000472558 CLCN6P51797 869 aa16.42■□□□□ 0.22
IFFO1-208ENST00000472558 CEBPZQ03701 1054 aaKnown RBP16.42■□□□□ 0.22
IFFO1-208ENST00000472558 RUFY2Q8WXA3 655 aa16.42■□□□□ 0.22
IFFO1-208ENST00000472558 ERCC4Q92889 916 aaPredicted RBP16.42■□□□□ 0.22
IFFO1-208ENST00000472558 MAP4K1Q92918 833 aa16.42■□□□□ 0.22
IFFO1-208ENST00000472558 NOL10Q9BSC4 688 aaKnown RBP16.42■□□□□ 0.22
IFFO1-208ENST00000472558 PLA2G4AP47712 749 aa16.42■□□□□ 0.22
IFFO1-208ENST00000472558 E4F1Q66K89 784 aaPredicted RBP16.42■□□□□ 0.22
IFFO1-208ENST00000472558 NBPF11Q86T75 865 aa16.42■□□□□ 0.22
IFFO1-208ENST00000472558 ANKLE2Q86XL3 938 aa16.42■□□□□ 0.22
IFFO1-208ENST00000472558 IPO4Q8TEX9 1081 aaKnown RBP16.42■□□□□ 0.22
IFFO1-208ENST00000472558 FTOQ9C0B1 505 aaKnown RBP eCLIP16.42■□□□□ 0.22
IFFO1-208ENST00000472558 CALCOCO1Q9P1Z2 691 aa16.42■□□□□ 0.22
IFFO1-208ENST00000472558 TTC41PQ6P2S7 1318 aa16.42■□□□□ 0.22
IFFO1-208ENST00000472558 OVOS2A0A0J9YW53 1432 aa16.42■□□□□ 0.22
IFFO1-208ENST00000472558 OVOS2Q6IE36 1432 aa16.42■□□□□ 0.22
IFFO1-208ENST00000472558 KDM4FA0A1W2PPD8 638 aa16.41■□□□□ 0.22
IFFO1-208ENST00000472558 NEMFO60524 1076 aa16.41■□□□□ 0.22
IFFO1-208ENST00000472558 SLIT1O75093 1534 aa16.41■□□□□ 0.22
IFFO1-208ENST00000472558 RESTQ13127 1097 aa16.41■□□□□ 0.22
IFFO1-208ENST00000472558 L2HGDHQ9H9P8 463 aa16.41■□□□□ 0.22
IFFO1-208ENST00000472558 ADGRL3Q9HAR2 1447 aa16.41■□□□□ 0.22
IFFO1-208ENST00000472558 PXDNLA1KZ92 1463 aa16.41■□□□□ 0.22
IFFO1-208ENST00000472558 IFIT2P09913 472 aaKnown RBP16.41■□□□□ 0.22
IFFO1-208ENST00000472558 GOLPH3LQ9H4A5 285 aa16.41■□□□□ 0.22
IFFO1-208ENST00000472558 ITSN1Q15811 1721 aa16.41■□□□□ 0.22
IFFO1-208ENST00000472558 NPHP4O75161 1426 aaPredicted RBP16.41■□□□□ 0.22
IFFO1-208ENST00000472558 NMIQ13287 307 aaPredicted RBP16.4■□□□□ 0.22
IFFO1-208ENST00000472558 CCDC93Q567U6 631 aa16.4■□□□□ 0.22
IFFO1-208ENST00000472558 EYA1Q99502 592 aa16.4■□□□□ 0.22
IFFO1-208ENST00000472558 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.4■□□□□ 0.22
IFFO1-208ENST00000472558 PNMA6AP0CW24 399 aaPredicted RBP16.39■□□□□ 0.22
IFFO1-208ENST00000472558 RPS6KB1P23443 525 aa16.39■□□□□ 0.22
IFFO1-208ENST00000472558 SLC20A2Q08357 652 aa16.39■□□□□ 0.22
IFFO1-208ENST00000472558 BMS1Q14692 1282 aaKnown RBP16.39■□□□□ 0.22
IFFO1-208ENST00000472558 SYT10Q6XYQ8 523 aa16.39■□□□□ 0.22
IFFO1-208ENST00000472558 IL17REQ8NFR9 667 aa16.39■□□□□ 0.22
IFFO1-208ENST00000472558 KCND1Q9NSA2 647 aa16.39■□□□□ 0.22
IFFO1-208ENST00000472558 ECHDC1Q9NTX5 307 aa16.39■□□□□ 0.22
IFFO1-208ENST00000472558 PA2G4Q9UQ80 394 aaKnown RBP16.39■□□□□ 0.22
IFFO1-208ENST00000472558 A0A0D9SFI3 127 aa16.39■□□□□ 0.21
IFFO1-208ENST00000472558 SNW1Q13573 536 aaKnown RBP16.39■□□□□ 0.21
IFFO1-208ENST00000472558 BLOC1S2Q6QNY1 142 aa16.39■□□□□ 0.21
IFFO1-208ENST00000472558 BRF1Q92994 677 aa16.39■□□□□ 0.21
IFFO1-208ENST00000472558 FBXW7Q969H0 707 aa16.39■□□□□ 0.21
IFFO1-208ENST00000472558 CAVIN2O95810 425 aa16.38■□□□□ 0.21
IFFO1-208ENST00000472558 ADD1P35611 737 aaKnown RBP16.38■□□□□ 0.21
IFFO1-208ENST00000472558 OS9Q13438 667 aaPredicted RBP16.38■□□□□ 0.21
IFFO1-208ENST00000472558 CACNA1FO60840 1977 aa16.38■□□□□ 0.21
IFFO1-208ENST00000472558 KDRP35968 1356 aa16.38■□□□□ 0.21
IFFO1-208ENST00000472558 TULP1O00294 542 aaPredicted RBP16.38■□□□□ 0.21
IFFO1-208ENST00000472558 TAF7Q15545 349 aaPredicted RBP16.38■□□□□ 0.21
IFFO1-208ENST00000472558 STX1AQ16623 288 aa16.38■□□□□ 0.21
IFFO1-208ENST00000472558 HDGFL1Q5TGJ6 251 aa16.38■□□□□ 0.21
IFFO1-208ENST00000472558 PPP1R13BQ96KQ4 1090 aa16.38■□□□□ 0.21
IFFO1-208ENST00000472558 TBX22Q9Y458 520 aa16.38■□□□□ 0.21
IFFO1-208ENST00000472558 BECN2A8MW95 431 aa16.37■□□□□ 0.21
IFFO1-208ENST00000472558 GIGYF1O75420 1035 aaPredicted RBP16.37■□□□□ 0.21
IFFO1-208ENST00000472558 BEND3Q5T5X7 828 aa16.37■□□□□ 0.21
IFFO1-208ENST00000472558 NFATC2IPQ8NCF5 419 aa16.37■□□□□ 0.21
IFFO1-208ENST00000472558 DNAJC2Q99543 621 aaKnown RBP16.37■□□□□ 0.21
IFFO1-208ENST00000472558 ACEP12821 1306 aa16.37■□□□□ 0.21
IFFO1-208ENST00000472558 CCAR1Q8IX12 1150 aaKnown RBP16.37■□□□□ 0.21
IFFO1-208ENST00000472558 CLASRPQ8N2M8 674 aaKnown RBP16.37■□□□□ 0.21
IFFO1-208ENST00000472558 FANCGO15287 622 aa16.36■□□□□ 0.21
IFFO1-208ENST00000472558 ZRANB2O95218 330 aaKnown RBP eCLIP16.36■□□□□ 0.21
IFFO1-208ENST00000472558 PSMA5P28066 241 aa16.36■□□□□ 0.21
IFFO1-208ENST00000472558 FAM193AP78312 1265 aa16.36■□□□□ 0.21
IFFO1-208ENST00000472558 ARHGAP29Q52LW3 1261 aa16.36■□□□□ 0.21
IFFO1-208ENST00000472558 TAF7LQ5H9L4 462 aa16.36■□□□□ 0.21
IFFO1-208ENST00000472558 ARMCX5Q6P1M9 558 aa16.36■□□□□ 0.21
IFFO1-208ENST00000472558 AOPEPQ8N6M6 819 aa16.36■□□□□ 0.21
IFFO1-208ENST00000472558 NEK11Q8NG66 645 aa16.36■□□□□ 0.21
IFFO1-208ENST00000472558 EVI5LQ96CN4 794 aa16.36■□□□□ 0.21
IFFO1-208ENST00000472558 LRRC37A3O60309 1634 aa16.36■□□□□ 0.21
IFFO1-208ENST00000472558 ANXA1P04083 346 aa16.36■□□□□ 0.21
IFFO1-208ENST00000472558 ZNF589Q86UQ0 364 aaPredicted RBP16.36■□□□□ 0.21
IFFO1-208ENST00000472558 TRIM34Q9BYJ4 488 aa16.36■□□□□ 0.21
IFFO1-208ENST00000472558 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.36■□□□□ 0.21
IFFO1-208ENST00000472558 PI4KAP2A4QPH2 592 aa16.35■□□□□ 0.21
IFFO1-208ENST00000472558 EIF2S2P20042 333 aaKnown RBP16.35■□□□□ 0.21
IFFO1-208ENST00000472558 RAD51AP2Q09MP3 1159 aa16.35■□□□□ 0.21
IFFO1-208ENST00000472558 PI4KAP1Q8N8J0 262 aa16.35■□□□□ 0.21
IFFO1-208ENST00000472558 FEZ2Q9UHY8 353 aaPredicted RBP16.35■□□□□ 0.21
IFFO1-208ENST00000472558 GNAT3A8MTJ3 354 aa16.35■□□□□ 0.21
IFFO1-208ENST00000472558 CREBRFQ8IUR6 639 aa16.35■□□□□ 0.21
IFFO1-208ENST00000472558 OSBPL5Q9H0X9 879 aaPredicted RBP16.35■□□□□ 0.21
IFFO1-208ENST00000472558 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.35■□□□□ 0.21
IFFO1-208ENST00000472558 USP31Q70CQ4 1352 aa16.35■□□□□ 0.21
IFFO1-208ENST00000472558 POLR3GO15318 223 aaPredicted RBP16.34■□□□□ 0.21
IFFO1-208ENST00000472558 FOSBP53539 338 aa16.34■□□□□ 0.21
IFFO1-208ENST00000472558 ENGASEQ8NFI3 743 aa16.34■□□□□ 0.21
IFFO1-208ENST00000472558 NALCNQ8IZF0 1738 aa16.34■□□□□ 0.21
IFFO1-208ENST00000472558 IGSF1Q8N6C5 1336 aa16.34■□□□□ 0.21
IFFO1-208ENST00000472558 SETD1BQ9UPS6 1966 aaKnown RBP16.34■□□□□ 0.21
IFFO1-208ENST00000472558 SEC31AO94979 1220 aaKnown RBP16.34■□□□□ 0.21
IFFO1-208ENST00000472558 ST5P78524 1137 aa16.34■□□□□ 0.21
IFFO1-208ENST00000472558 ANKRD1Q15327 319 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms