RNA–Protein interactions for RNA: ENST00000472267.5

MRPS18B-208, Transcript of mitochondrial ribosomal protein S18B, human

TSL 1 (best)

Gene MRPS18B, Length 1,610 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPS18B-208	ENST00000472267	TTLL11	Q8NHH1	800 aa		13.2	□□□□□ -0.3
MRPS18B-208	ENST00000472267	RILPL2	Q969X0	211 aa		13.2	□□□□□ -0.3
MRPS18B-208	ENST00000472267	EAF2	Q96CJ1	260 aa	Predicted RBP	13.2	□□□□□ -0.3
MRPS18B-208	ENST00000472267	GPATCH3	Q96I76	525 aa		13.2	□□□□□ -0.3
MRPS18B-208	ENST00000472267	EP400	Q96L91	3159 aa		13.19	□□□□□ -0.3
MRPS18B-208	ENST00000472267	NTSR2	O95665	410 aa		13.19	□□□□□ -0.3
MRPS18B-208	ENST00000472267	MAP4K4	O95819	1239 aa	Predicted RBP	13.19	□□□□□ -0.3
MRPS18B-208	ENST00000472267	RFC4	P35249	363 aa		13.19	□□□□□ -0.3
MRPS18B-208	ENST00000472267	LRRC24	Q50LG9	513 aa		13.19	□□□□□ -0.3
MRPS18B-208	ENST00000472267	TBC1D9B	Q66K14	1250 aa		13.19	□□□□□ -0.3
MRPS18B-208	ENST00000472267	PUS3	Q9BZE2	481 aa	Known RBP	13.19	□□□□□ -0.3
MRPS18B-208	ENST00000472267	GREM2	Q9H772	168 aa		13.19	□□□□□ -0.3
MRPS18B-208	ENST00000472267	BCL2L12	Q9HB09	334 aa		13.19	□□□□□ -0.3
MRPS18B-208	ENST00000472267	EYA2	O00167	538 aa		13.18	□□□□□ -0.3
MRPS18B-208	ENST00000472267	ITGA6	P23229	1130 aa		13.18	□□□□□ -0.3
MRPS18B-208	ENST00000472267	TXNRD1	Q16881	649 aa		13.18	□□□□□ -0.3
MRPS18B-208	ENST00000472267	ATG9A	Q7Z3C6	839 aa		13.18	□□□□□ -0.3
MRPS18B-208	ENST00000472267	TUBGCP6	Q96RT7	1819 aa		13.18	□□□□□ -0.3
MRPS18B-208	ENST00000472267	C4A	P0C0L4	1744 aa		13.18	□□□□□ -0.3
MRPS18B-208	ENST00000472267	TTC41P	Q6P2S7	1318 aa		13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	ANKRD18B	A2A2Z9	1011 aa		13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	IL15	P40933	162 aa	Predicted RBP	13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	TNNI3K	Q59H18	835 aa		13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	CASC1	Q6TDU7	716 aa		13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	PI4K2B	Q8TCG2	481 aa		13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	SETDB2	Q96T68	719 aa		13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	ECHDC1	Q9NTX5	307 aa		13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	TLR7	Q9NYK1	1049 aa	Known RBP	13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	FPGT-TNNI3K	V9GXZ4	949 aa		13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	DDX60	Q8IY21	1712 aa	Known RBP	13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	AK9	Q5TCS8	1911 aa		13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	USP42	Q9H9J4	1324 aa	Known RBP	13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	ERC2	O15083	957 aa		13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	CIAO1	O76071	339 aa		13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	GTF2E1	P29083	439 aa	Predicted RBP	13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	PROM2	Q8N271	834 aa		13.17	□□□□□ -0.3
MRPS18B-208	ENST00000472267	UBR3	Q6ZT12	1888 aa		13.16	□□□□□ -0.3
MRPS18B-208	ENST00000472267	RGL2	O15211	777 aa		13.16	□□□□□ -0.3
MRPS18B-208	ENST00000472267	GLRX3	O76003	335 aa	Known RBP	13.16	□□□□□ -0.3
MRPS18B-208	ENST00000472267	HSP90B1	P14625	803 aa	Known RBP	13.16	□□□□□ -0.3
MRPS18B-208	ENST00000472267	ERFE	Q4G0M1	354 aa		13.16	□□□□□ -0.3
MRPS18B-208	ENST00000472267	LDHAL6A	Q6ZMR3	332 aa		13.15	□□□□□ -0.3
MRPS18B-208	ENST00000472267	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.15	□□□□□ -0.3
MRPS18B-208	ENST00000472267	NEUROD6	Q96NK8	337 aa		13.15	□□□□□ -0.3
MRPS18B-208	ENST00000472267	CNNM1	Q9NRU3	951 aa		13.15	□□□□□ -0.3
MRPS18B-208	ENST00000472267	CEP126	Q9P2H0	1117 aa		13.15	□□□□□ -0.3
MRPS18B-208	ENST00000472267	LAMB2	P55268	1798 aa		13.15	□□□□□ -0.3
MRPS18B-208	ENST00000472267	PLSCR1	O15162	318 aa		13.14	□□□□□ -0.31
MRPS18B-208	ENST00000472267	CCDC152	Q4G0S7	254 aa		13.14	□□□□□ -0.31
MRPS18B-208	ENST00000472267	C22orf23	Q9BZE7	217 aa		13.14	□□□□□ -0.31
MRPS18B-208	ENST00000472267	NYX	Q9GZU5	481 aa		13.14	□□□□□ -0.31
MRPS18B-208	ENST00000472267	NPHP1	O15259	732 aa		13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	METTL24	Q5JXM2	366 aa		13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	CNTROB	Q8N137	903 aa		13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	TBC1D32	Q96NH3	1257 aa		13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	DBNDD2	Q9BQY9	259 aa		13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	SEC31B	Q9NQW1	1179 aa		13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	DBNL	Q9UJU6	430 aa	Known RBP	13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	FBXO3	Q9UK99	471 aa		13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	TNS1	Q9HBL0	1735 aa	Known RBP	13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	HMGB2	P26583	209 aa	Known RBP	13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	SSFA2	P28290	1259 aa		13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	TIMM10	P62072	90 aa		13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	CCDC24	Q8N4L8	307 aa		13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	BOLA2	Q9H3K6	86 aa		13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	GPR108	Q9NPR9	543 aa		13.13	□□□□□ -0.31
MRPS18B-208	ENST00000472267	COL24A1	Q17RW2	1714 aa		13.12	□□□□□ -0.31
MRPS18B-208	ENST00000472267	SPEF2	Q9C093	1822 aa		13.12	□□□□□ -0.31
MRPS18B-208	ENST00000472267	TPTE2	Q6XPS3	522 aa		13.12	□□□□□ -0.31
MRPS18B-208	ENST00000472267	IPO9	Q96P70	1041 aa	Known RBP	13.12	□□□□□ -0.31
MRPS18B-208	ENST00000472267	TFCP2L1	Q9NZI6	479 aa		13.12	□□□□□ -0.31
MRPS18B-208	ENST00000472267	RIPOR2	Q9Y4F9	1068 aa		13.12	□□□□□ -0.31
MRPS18B-208	ENST00000472267	ABCC12	Q96J65	1359 aa		13.12	□□□□□ -0.31
MRPS18B-208	ENST00000472267	CASZ1	Q86V15	1759 aa		13.11	□□□□□ -0.31
MRPS18B-208	ENST00000472267	ZNF609	O15014	1411 aa		13.11	□□□□□ -0.31
MRPS18B-208	ENST00000472267		A0A1B0GUL7	405 aa		13.11	□□□□□ -0.31
MRPS18B-208	ENST00000472267	EIF5B	O60841	1220 aa	Known RBP	13.11	□□□□□ -0.31
MRPS18B-208	ENST00000472267	CHML	P26374	656 aa		13.11	□□□□□ -0.31
MRPS18B-208	ENST00000472267	NFIX	Q14938	502 aa		13.11	□□□□□ -0.31
MRPS18B-208	ENST00000472267	ZNF827	Q17R98	1081 aa		13.11	□□□□□ -0.31
MRPS18B-208	ENST00000472267	C3orf67	Q6ZVT6	689 aa		13.11	□□□□□ -0.31
MRPS18B-208	ENST00000472267	MPHOSPH8	Q99549	860 aa		13.11	□□□□□ -0.31
MRPS18B-208	ENST00000472267	AKAP2	Q9Y2D5	859 aa		13.11	□□□□□ -0.31
MRPS18B-208	ENST00000472267	RIC1	Q4ADV7	1423 aa		13.11	□□□□□ -0.31
MRPS18B-208	ENST00000472267	GYS1	P13807	737 aa		13.1	□□□□□ -0.31
MRPS18B-208	ENST00000472267	IGHMBP2	P38935	993 aa	Known RBP	13.1	□□□□□ -0.31
MRPS18B-208	ENST00000472267	DDRGK1	Q96HY6	314 aa		13.1	□□□□□ -0.31
MRPS18B-208	ENST00000472267	CARMIL3	Q8ND23	1372 aa		13.1	□□□□□ -0.31
MRPS18B-208	ENST00000472267	ATP5J	P18859	108 aa		13.1	□□□□□ -0.31
MRPS18B-208	ENST00000472267	ATP2B3	Q16720	1220 aa		13.1	□□□□□ -0.31
MRPS18B-208	ENST00000472267	SLC10A5	Q5PT55	438 aa		13.1	□□□□□ -0.31
MRPS18B-208	ENST00000472267	GORAB	Q5T7V8	394 aa		13.1	□□□□□ -0.31
MRPS18B-208	ENST00000472267	EVI5L	Q96CN4	794 aa		13.1	□□□□□ -0.31
MRPS18B-208	ENST00000472267	ESYT1	Q9BSJ8	1104 aa		13.1	□□□□□ -0.31
MRPS18B-208	ENST00000472267	RTL9	Q8NET4	1388 aa		13.09	□□□□□ -0.31
MRPS18B-208	ENST00000472267	ADORA1	P30542	326 aa		13.09	□□□□□ -0.31
MRPS18B-208	ENST00000472267	SF3B3	Q15393	1217 aa	Known RBP	13.09	□□□□□ -0.31
MRPS18B-208	ENST00000472267	HELB	Q8NG08	1087 aa	Predicted RBP	13.09	□□□□□ -0.31
MRPS18B-208	ENST00000472267	AKT1S1	Q96B36	256 aa		13.09	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms