RNA–Protein interactions for RNA: ENST00000472219.5

SNX21-209, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 1,858 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-209ENST00000472219 MTMR6Q9Y217 621 aa24.81■■□□□ 1.56
SNX21-209ENST00000472219 WDR17Q8IZU2 1322 aa24.81■■□□□ 1.56
SNX21-209ENST00000472219 MCM5P33992 734 aa24.8■■□□□ 1.56
SNX21-209ENST00000472219 UVSSAQ2YD98 709 aa24.8■■□□□ 1.56
SNX21-209ENST00000472219 USPL1Q5W0Q7 1092 aa24.8■■□□□ 1.56
SNX21-209ENST00000472219 TAF5LO75529 589 aa24.79■■□□□ 1.56
SNX21-209ENST00000472219 CASP7P55210 303 aa24.79■■□□□ 1.56
SNX21-209ENST00000472219 ZCRB1Q8TBF4 217 aaKnown RBP24.79■■□□□ 1.56
SNX21-209ENST00000472219 HAUS7Q99871 368 aa24.79■■□□□ 1.56
SNX21-209ENST00000472219 CCDC39Q9UFE4 941 aa24.79■■□□□ 1.56
SNX21-209ENST00000472219 U3KPZ7 1027 aaPredicted RBP24.79■■□□□ 1.56
SNX21-209ENST00000472219 ATP5J2-PTCD1G3V325 749 aa24.79■■□□□ 1.56
SNX21-209ENST00000472219 PTCD1O75127 700 aaKnown RBP24.79■■□□□ 1.56
SNX21-209ENST00000472219 CWC25Q9NXE8 425 aaPredicted RBP24.79■■□□□ 1.56
SNX21-209ENST00000472219 TPCN1Q9ULQ1 816 aa24.79■■□□□ 1.56
SNX21-209ENST00000472219 NOL7Q9UMY1 257 aaKnown RBP24.79■■□□□ 1.56
SNX21-209ENST00000472219 H7C1W4 665 aa24.78■■□□□ 1.56
SNX21-209ENST00000472219 GPR108Q9NPR9 543 aa24.78■■□□□ 1.56
SNX21-209ENST00000472219 UBR2Q8IWV8 1755 aa24.78■■□□□ 1.56
SNX21-209ENST00000472219 PIP4K2AP48426 406 aaPredicted RBP24.77■■□□□ 1.56
SNX21-209ENST00000472219 LARP1BQ659C4 914 aaKnown RBP24.77■■□□□ 1.56
SNX21-209ENST00000472219 PRDM11Q9NQV5 511 aa24.77■■□□□ 1.56
SNX21-209ENST00000472219 VPS37CA5D8V6 355 aaPredicted RBP24.77■■□□□ 1.56
SNX21-209ENST00000472219 FIBPO43427 364 aa24.77■■□□□ 1.56
SNX21-209ENST00000472219 LMBR1LQ6UX01 489 aa24.77■■□□□ 1.56
SNX21-209ENST00000472219 ZNF589Q86UQ0 364 aaPredicted RBP24.77■■□□□ 1.56
SNX21-209ENST00000472219 TOM1L2Q6ZVM7 507 aa24.76■■□□□ 1.55
SNX21-209ENST00000472219 MCMDC2Q4G0Z9 681 aa24.75■■□□□ 1.55
SNX21-209ENST00000472219 RNF214Q8ND24 703 aa24.75■■□□□ 1.55
SNX21-209ENST00000472219 NUP188Q5SRE5 1749 aa24.75■■□□□ 1.55
SNX21-209ENST00000472219 IL15P40933 162 aaPredicted RBP24.75■■□□□ 1.55
SNX21-209ENST00000472219 NKX1-1Q15270 411 aaPredicted RBP24.75■■□□□ 1.55
SNX21-209ENST00000472219 NECAB1Q8N987 351 aa24.75■■□□□ 1.55
SNX21-209ENST00000472219 CCDC191Q8NCU4 936 aa24.75■■□□□ 1.55
SNX21-209ENST00000472219 JARID2Q92833 1246 aaPredicted RBP24.75■■□□□ 1.55
SNX21-209ENST00000472219 KRT85P78386 507 aa24.74■■□□□ 1.55
SNX21-209ENST00000472219 ST3GAL1Q11201 340 aa24.74■■□□□ 1.55
SNX21-209ENST00000472219 DNAJC2Q99543 621 aaKnown RBP24.74■■□□□ 1.55
SNX21-209ENST00000472219 DBNDD2Q9BQY9 259 aa24.74■■□□□ 1.55
SNX21-209ENST00000472219 CHMP3Q9Y3E7 222 aa24.74■■□□□ 1.55
SNX21-209ENST00000472219 PAPPAQ13219 1627 aa24.73■■□□□ 1.55
SNX21-209ENST00000472219 SH3TC1Q8TE82 1336 aa24.73■■□□□ 1.55
SNX21-209ENST00000472219 FOXO4P98177 505 aa24.73■■□□□ 1.55
SNX21-209ENST00000472219 KBTBD3Q8NAB2 608 aa24.73■■□□□ 1.55
SNX21-209ENST00000472219 ATG3Q9NT62 314 aa24.73■■□□□ 1.55
SNX21-209ENST00000472219 PALLDQ8WX93 1383 aa24.73■■□□□ 1.55
SNX21-209ENST00000472219 NBPF26B4DH59 902 aa24.72■■□□□ 1.55
SNX21-209ENST00000472219 DNM1Q05193 864 aaKnown RBP24.72■■□□□ 1.55
SNX21-209ENST00000472219 NBPF14Q5TI25 921 aa24.72■■□□□ 1.55
SNX21-209ENST00000472219 NBPF10Q6P3W6 841 aaKnown RBP24.72■■□□□ 1.55
SNX21-209ENST00000472219 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.72■■□□□ 1.55
SNX21-209ENST00000472219 NBPF15Q8N660 670 aa24.72■■□□□ 1.55
SNX21-209ENST00000472219 NEK1Q96PY6 1258 aa24.72■■□□□ 1.55
SNX21-209ENST00000472219 HMGB1P09429 215 aaKnown RBP24.72■■□□□ 1.55
SNX21-209ENST00000472219 TOB2Q14106 344 aaPredicted RBP24.72■■□□□ 1.55
SNX21-209ENST00000472219 BRINP3Q76B58 766 aa24.72■■□□□ 1.55
SNX21-209ENST00000472219 DDX54Q8TDD1 881 aaKnown RBP24.72■■□□□ 1.55
SNX21-209ENST00000472219 ELP1O95163 1332 aa24.71■■□□□ 1.55
SNX21-209ENST00000472219 ZNF500O60304 480 aaPredicted RBP24.71■■□□□ 1.55
SNX21-209ENST00000472219 IL2RBP14784 551 aa24.71■■□□□ 1.55
SNX21-209ENST00000472219 EDC3Q96F86 508 aaKnown RBP24.71■■□□□ 1.55
SNX21-209ENST00000472219 ZKSCAN5Q9Y2L8 839 aa24.71■■□□□ 1.55
SNX21-209ENST00000472219 COL5A2P05997 1499 aaPredicted RBP24.71■■□□□ 1.55
SNX21-209ENST00000472219 KCPQ6ZWJ8 1503 aa24.71■■□□□ 1.55
SNX21-209ENST00000472219 ZNF609O15014 1411 aa24.71■■□□□ 1.55
SNX21-209ENST00000472219 HELLSQ9NRZ9 838 aa24.7■■□□□ 1.55
SNX21-209ENST00000472219 CIAO1O76071 339 aa24.7■■□□□ 1.54
SNX21-209ENST00000472219 CARD10Q9BWT7 1032 aa24.7■■□□□ 1.54
SNX21-209ENST00000472219 SCAND2PQ9GZW5 306 aaPredicted RBP24.69■■□□□ 1.54
SNX21-209ENST00000472219 TJP1Q07157 1748 aa24.69■■□□□ 1.54
SNX21-209ENST00000472219 SPEF2Q9C093 1822 aa24.68■■□□□ 1.54
SNX21-209ENST00000472219 TNS2Q63HR2 1409 aa24.68■■□□□ 1.54
SNX21-209ENST00000472219 OFD1O75665 1012 aa24.68■■□□□ 1.54
SNX21-209ENST00000472219 LRRFIP1Q32MZ4 808 aaKnown RBP24.68■■□□□ 1.54
SNX21-209ENST00000472219 TTLL7Q6ZT98 887 aa24.68■■□□□ 1.54
SNX21-209ENST00000472219 ATG9AQ7Z3C6 839 aa24.68■■□□□ 1.54
SNX21-209ENST00000472219 NEUROD6Q96NK8 337 aa24.68■■□□□ 1.54
SNX21-209ENST00000472219 PAG1Q9NWQ8 432 aa24.68■■□□□ 1.54
SNX21-209ENST00000472219 SOS2Q07890 1332 aaPredicted RBP24.68■■□□□ 1.54
SNX21-209ENST00000472219 EYA2O00167 538 aa24.67■■□□□ 1.54
SNX21-209ENST00000472219 PTMAP06454 111 aaKnown RBP24.67■■□□□ 1.54
SNX21-209ENST00000472219 DSCC1Q9BVC3 393 aa24.67■■□□□ 1.54
SNX21-209ENST00000472219 FBXO3Q9UK99 471 aa24.67■■□□□ 1.54
SNX21-209ENST00000472219 XIRP1Q702N8 1843 aaKnown RBP24.67■■□□□ 1.54
SNX21-209ENST00000472219 DDX46Q7L014 1031 aaKnown RBP24.66■■□□□ 1.54
SNX21-209ENST00000472219 GTF3C6Q969F1 213 aa24.66■■□□□ 1.54
SNX21-209ENST00000472219 CHMP4CQ96CF2 233 aa24.66■■□□□ 1.54
SNX21-209ENST00000472219 TPM2P07951 284 aa24.66■■□□□ 1.54
SNX21-209ENST00000472219 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.66■■□□□ 1.54
SNX21-209ENST00000472219 CDC37L1Q7L3B6 337 aa24.65■■□□□ 1.54
SNX21-209ENST00000472219 TCEANC2Q96MN5 208 aa24.65■■□□□ 1.54
SNX21-209ENST00000472219 A1BGP04217 495 aa24.64■■□□□ 1.54
SNX21-209ENST00000472219 LLPHQ9BRT6 129 aaKnown RBP24.64■■□□□ 1.54
SNX21-209ENST00000472219 TEX13AQ9BXU3 409 aaPredicted RBP24.64■■□□□ 1.54
SNX21-209ENST00000472219 HSP90B1P14625 803 aaKnown RBP24.64■■□□□ 1.53
SNX21-209ENST00000472219 TERF1P54274 439 aa24.64■■□□□ 1.53
SNX21-209ENST00000472219 FGD1P98174 961 aa24.64■■□□□ 1.53
SNX21-209ENST00000472219 ZBTB3Q9H5J0 574 aa24.64■■□□□ 1.53
SNX21-209ENST00000472219 KIF3AQ9Y496 699 aa24.64■■□□□ 1.53
SNX21-209ENST00000472219 TAF6LQ9Y6J9 622 aa24.64■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms