RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 DNAJC10Q8IXB1 793 aa18.08■□□□□ 0.49
UBXN11-213ENST00000472155 CWC25Q9NXE8 425 aaPredicted RBP18.08■□□□□ 0.49
UBXN11-213ENST00000472155 ZSWIM6Q9HCJ5 1215 aa18.08■□□□□ 0.48
UBXN11-213ENST00000472155 TJP1Q07157 1748 aa18.08■□□□□ 0.48
UBXN11-213ENST00000472155 NUP188Q5SRE5 1749 aa18.08■□□□□ 0.48
UBXN11-213ENST00000472155 MED23Q9ULK4 1368 aa18.07■□□□□ 0.48
UBXN11-213ENST00000472155 PTMSP20962 102 aa18.07■□□□□ 0.48
UBXN11-213ENST00000472155 KCNB2Q92953 911 aa18.07■□□□□ 0.48
UBXN11-213ENST00000472155 NEUROD6Q96NK8 337 aa18.07■□□□□ 0.48
UBXN11-213ENST00000472155 ME3Q16798 604 aa18.07■□□□□ 0.48
UBXN11-213ENST00000472155 ATP5JP18859 108 aa18.06■□□□□ 0.48
UBXN11-213ENST00000472155 TMOD3Q9NYL9 352 aa18.06■□□□□ 0.48
UBXN11-213ENST00000472155 TPCN1Q9ULQ1 816 aa18.06■□□□□ 0.48
UBXN11-213ENST00000472155 ZNF609O15014 1411 aa18.06■□□□□ 0.48
UBXN11-213ENST00000472155 PLEKHG2Q9H7P9 1386 aa18.06■□□□□ 0.48
UBXN11-213ENST00000472155 TAF5LO75529 589 aa18.05■□□□□ 0.48
UBXN11-213ENST00000472155 SYT1P21579 422 aa18.05■□□□□ 0.48
UBXN11-213ENST00000472155 CYP46A1Q9Y6A2 500 aa18.05■□□□□ 0.48
UBXN11-213ENST00000472155 TNS2Q63HR2 1409 aa18.05■□□□□ 0.48
UBXN11-213ENST00000472155 PRIM1P49642 420 aaKnown RBP18.05■□□□□ 0.48
UBXN11-213ENST00000472155 FAM89AQ96GI7 184 aa18.05■□□□□ 0.48
UBXN11-213ENST00000472155 PAPPAQ13219 1627 aa18.05■□□□□ 0.48
UBXN11-213ENST00000472155 SLC4A9Q96Q91 983 aa18.04■□□□□ 0.48
UBXN11-213ENST00000472155 A0A0G2JLW4 131 aa18.04■□□□□ 0.48
UBXN11-213ENST00000472155 VPS53Q5VIR6 699 aa18.04■□□□□ 0.48
UBXN11-213ENST00000472155 SNRKQ9NRH2 765 aa18.04■□□□□ 0.48
UBXN11-213ENST00000472155 ATG3Q9NT62 314 aa18.04■□□□□ 0.48
UBXN11-213ENST00000472155 SYCE3A1L190 88 aa18.03■□□□□ 0.48
UBXN11-213ENST00000472155 RBSNQ9H1K0 784 aa18.03■□□□□ 0.48
UBXN11-213ENST00000472155 CNPY2Q9Y2B0 182 aa18.03■□□□□ 0.48
UBXN11-213ENST00000472155 ERBB4Q15303 1308 aa18.03■□□□□ 0.48
UBXN11-213ENST00000472155 ZKSCAN1P17029 563 aaPredicted RBP18.03■□□□□ 0.48
UBXN11-213ENST00000472155 GJB2P29033 226 aa18.03■□□□□ 0.48
UBXN11-213ENST00000472155 USP48Q86UV5 1035 aa18.03■□□□□ 0.48
UBXN11-213ENST00000472155 GOLIM4O00461 696 aa18.02■□□□□ 0.48
UBXN11-213ENST00000472155 HLFQ16534 295 aa18.02■□□□□ 0.48
UBXN11-213ENST00000472155 GPTP24298 496 aa18.02■□□□□ 0.48
UBXN11-213ENST00000472155 ZNF445P59923 1031 aa18.02■□□□□ 0.48
UBXN11-213ENST00000472155 FAM43AQ8N2R8 423 aa18.02■□□□□ 0.48
UBXN11-213ENST00000472155 CCDC191Q8NCU4 936 aa18.02■□□□□ 0.48
UBXN11-213ENST00000472155 HAUS7Q99871 368 aa18.02■□□□□ 0.48
UBXN11-213ENST00000472155 SMC3Q9UQE7 1217 aa18.02■□□□□ 0.48
UBXN11-213ENST00000472155 HIP1O00291 1037 aa18.02■□□□□ 0.47
UBXN11-213ENST00000472155 TM6SF1Q9BZW5 370 aa18.02■□□□□ 0.47
UBXN11-213ENST00000472155 WDR33Q9C0J8 1336 aaKnown RBP18.01■□□□□ 0.47
UBXN11-213ENST00000472155 STX6O43752 255 aa18.01■□□□□ 0.47
UBXN11-213ENST00000472155 SYTL4Q96C24 671 aaPredicted RBP18.01■□□□□ 0.47
UBXN11-213ENST00000472155 NASPP49321 788 aaPredicted RBP18.01■□□□□ 0.47
UBXN11-213ENST00000472155 STK3Q13188 491 aa18.01■□□□□ 0.47
UBXN11-213ENST00000472155 TOB2Q14106 344 aaPredicted RBP18.01■□□□□ 0.47
UBXN11-213ENST00000472155 ISCA1Q9BUE6 129 aa18.01■□□□□ 0.47
UBXN11-213ENST00000472155 ZSCAN22P10073 491 aaPredicted RBP18■□□□□ 0.47
UBXN11-213ENST00000472155 LRRC2Q9BYS8 371 aa18■□□□□ 0.47
UBXN11-213ENST00000472155 EYA2O00167 538 aa18■□□□□ 0.47
UBXN11-213ENST00000472155 ADORA1P30542 326 aa18■□□□□ 0.47
UBXN11-213ENST00000472155 TCIRG1Q13488 830 aa18■□□□□ 0.47
UBXN11-213ENST00000472155 ISY1Q9ULR0 285 aaKnown RBP18■□□□□ 0.47
UBXN11-213ENST00000472155 NHSL1Q5SYE7 1610 aa18■□□□□ 0.47
UBXN11-213ENST00000472155 A0A1B0GUL7 405 aa17.99■□□□□ 0.47
UBXN11-213ENST00000472155 JCADQ9P266 1359 aa17.99■□□□□ 0.47
UBXN11-213ENST00000472155 CYP21A2P08686 494 aa17.98■□□□□ 0.47
UBXN11-213ENST00000472155 FAM173BQ6P4H8 233 aa17.98■□□□□ 0.47
UBXN11-213ENST00000472155 BLOC1S2Q6QNY1 142 aa17.98■□□□□ 0.47
UBXN11-213ENST00000472155 MTMR6Q9Y217 621 aa17.98■□□□□ 0.47
UBXN11-213ENST00000472155 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.98■□□□□ 0.47
UBXN11-213ENST00000472155 RPS6KB1P23443 525 aa17.98■□□□□ 0.47
UBXN11-213ENST00000472155 ITGB4P16144 1822 aa17.97■□□□□ 0.47
UBXN11-213ENST00000472155 PI16Q6UXB8 463 aa17.97■□□□□ 0.47
UBXN11-213ENST00000472155 STOX1Q6ZVD7 989 aa17.97■□□□□ 0.47
UBXN11-213ENST00000472155 KBTBD3Q8NAB2 608 aa17.97■□□□□ 0.47
UBXN11-213ENST00000472155 PAG1Q9NWQ8 432 aa17.97■□□□□ 0.47
UBXN11-213ENST00000472155 VPS37CA5D8V6 355 aaPredicted RBP17.97■□□□□ 0.47
UBXN11-213ENST00000472155 FIBPO43427 364 aa17.97■□□□□ 0.47
UBXN11-213ENST00000472155 F13A1P00488 732 aa17.97■□□□□ 0.47
UBXN11-213ENST00000472155 IL15P40933 162 aaPredicted RBP17.97■□□□□ 0.47
UBXN11-213ENST00000472155 SCARF1Q14162 830 aa17.97■□□□□ 0.47
UBXN11-213ENST00000472155 RNF214Q8ND24 703 aa17.97■□□□□ 0.47
UBXN11-213ENST00000472155 ZBTB1Q9Y2K1 713 aa17.97■□□□□ 0.47
UBXN11-213ENST00000472155 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.96■□□□□ 0.47
UBXN11-213ENST00000472155 DNM1Q05193 864 aaKnown RBP17.96■□□□□ 0.47
UBXN11-213ENST00000472155 HSP90AB3PQ58FF7 597 aa17.96■□□□□ 0.47
UBXN11-213ENST00000472155 USPL1Q5W0Q7 1092 aa17.96■□□□□ 0.47
UBXN11-213ENST00000472155 FERMT3Q86UX7 667 aa17.96■□□□□ 0.47
UBXN11-213ENST00000472155 MCMDC2Q4G0Z9 681 aa17.96■□□□□ 0.47
UBXN11-213ENST00000472155 A0A0G2JS52 829 aa17.95■□□□□ 0.46
UBXN11-213ENST00000472155 TBC1D2BQ9UPU7 963 aa17.95■□□□□ 0.46
UBXN11-213ENST00000472155 PPFIA3O75145 1194 aa17.94■□□□□ 0.46
UBXN11-213ENST00000472155 CCDC57Q2TAC2 916 aa17.94■□□□□ 0.46
UBXN11-213ENST00000472155 CDC37L1Q7L3B6 337 aa17.94■□□□□ 0.46
UBXN11-213ENST00000472155 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.94■□□□□ 0.46
UBXN11-213ENST00000472155 JAK2O60674 1132 aa17.94■□□□□ 0.46
UBXN11-213ENST00000472155 IFIT1P09914 478 aaKnown RBP17.94■□□□□ 0.46
UBXN11-213ENST00000472155 PSMA5P28066 241 aa17.94■□□□□ 0.46
UBXN11-213ENST00000472155 FKBP4Q02790 459 aaKnown RBP eCLIP17.94■□□□□ 0.46
UBXN11-213ENST00000472155 RNF20Q5VTR2 975 aa17.94■□□□□ 0.46
UBXN11-213ENST00000472155 LRSAM1Q6UWE0 723 aa17.94■□□□□ 0.46
UBXN11-213ENST00000472155 SH2B1Q9NRF2 756 aaPredicted RBP17.94■□□□□ 0.46
UBXN11-213ENST00000472155 ADAMTS2O95450 1211 aa17.93■□□□□ 0.46
UBXN11-213ENST00000472155 CYP19A1P11511 503 aaPredicted RBP17.93■□□□□ 0.46
UBXN11-213ENST00000472155 KIF6Q6ZMV9 814 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms