RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 CTSWP56202 376 aa18.43■□□□□ 0.54
SMARCD3-207ENST00000472103 SF3B3Q15393 1217 aaKnown RBP18.43■□□□□ 0.54
SMARCD3-207ENST00000472103 CRY2Q49AN0 593 aa18.43■□□□□ 0.54
SMARCD3-207ENST00000472103 TTLL11Q8NHH1 800 aa18.43■□□□□ 0.54
SMARCD3-207ENST00000472103 BICC1Q9H694 974 aaKnown RBP18.43■□□□□ 0.54
SMARCD3-207ENST00000472103 WWC3Q9ULE0 1092 aa18.43■□□□□ 0.54
SMARCD3-207ENST00000472103 BRCA1P38398 1863 aaKnown RBP18.42■□□□□ 0.54
SMARCD3-207ENST00000472103 CACNA1SQ13698 1873 aa18.42■□□□□ 0.54
SMARCD3-207ENST00000472103 TGFB2P61812 414 aa18.42■□□□□ 0.54
SMARCD3-207ENST00000472103 SLC51AQ86UW1 340 aa18.42■□□□□ 0.54
SMARCD3-207ENST00000472103 DDX19BQ9UMR2 479 aa18.42■□□□□ 0.54
SMARCD3-207ENST00000472103 CSF1RP07333 972 aa18.41■□□□□ 0.54
SMARCD3-207ENST00000472103 GNAI3P08754 354 aa18.41■□□□□ 0.54
SMARCD3-207ENST00000472103 LMBR1LQ6UX01 489 aa18.41■□□□□ 0.54
SMARCD3-207ENST00000472103 GREM2Q9H772 168 aa18.41■□□□□ 0.54
SMARCD3-207ENST00000472103 SEC31BQ9NQW1 1179 aa18.41■□□□□ 0.54
SMARCD3-207ENST00000472103 H0YIN7 160 aa18.4■□□□□ 0.54
SMARCD3-207ENST00000472103 FAM161AQ3B820 660 aa18.4■□□□□ 0.54
SMARCD3-207ENST00000472103 RABL6Q3YEC7 729 aaPredicted RBP18.4■□□□□ 0.54
SMARCD3-207ENST00000472103 ZBTB40Q9NUA8 1239 aa18.4■□□□□ 0.54
SMARCD3-207ENST00000472103 EXOC6Q8TAG9 804 aa18.39■□□□□ 0.53
SMARCD3-207ENST00000472103 ZNF622Q969S3 477 aaKnown RBP eCLIP18.39■□□□□ 0.53
SMARCD3-207ENST00000472103 MASTLQ96GX5 879 aa18.39■□□□□ 0.53
SMARCD3-207ENST00000472103 SLX4Q8IY92 1834 aa18.39■□□□□ 0.53
SMARCD3-207ENST00000472103 GNAI2P04899 355 aa18.38■□□□□ 0.53
SMARCD3-207ENST00000472103 NPR1P16066 1061 aa18.38■□□□□ 0.53
SMARCD3-207ENST00000472103 HOXA10P31260 410 aaPredicted RBP18.38■□□□□ 0.53
SMARCD3-207ENST00000472103 RPGRQ92834 1020 aaKnown RBP18.38■□□□□ 0.53
SMARCD3-207ENST00000472103 CELF1Q92879 486 aaKnown RBP18.38■□□□□ 0.53
SMARCD3-207ENST00000472103 SPEF2Q9C093 1822 aa18.37■□□□□ 0.53
SMARCD3-207ENST00000472103 CCDC152Q4G0S7 254 aa18.37■□□□□ 0.53
SMARCD3-207ENST00000472103 STYK1Q6J9G0 422 aa18.37■□□□□ 0.53
SMARCD3-207ENST00000472103 CHMP3Q9Y3E7 222 aa18.37■□□□□ 0.53
SMARCD3-207ENST00000472103 HSP90B1P14625 803 aaKnown RBP18.36■□□□□ 0.53
SMARCD3-207ENST00000472103 ITGA6P23229 1130 aa18.36■□□□□ 0.53
SMARCD3-207ENST00000472103 RBM17Q96I25 401 aaKnown RBP18.36■□□□□ 0.53
SMARCD3-207ENST00000472103 CRAMP1Q96RY5 1269 aa18.36■□□□□ 0.53
SMARCD3-207ENST00000472103 PDZRN3Q9UPQ7 1066 aa18.36■□□□□ 0.53
SMARCD3-207ENST00000472103 RTL9Q8NET4 1388 aa18.35■□□□□ 0.53
SMARCD3-207ENST00000472103 PNMA6EA0A0J9YXQ4 647 aa18.35■□□□□ 0.53
SMARCD3-207ENST00000472103 RFX5P48382 616 aaPredicted RBP18.35■□□□□ 0.53
SMARCD3-207ENST00000472103 DDX46Q7L014 1031 aaKnown RBP18.35■□□□□ 0.53
SMARCD3-207ENST00000472103 ZNF594Q96JF6 807 aaPredicted RBP18.35■□□□□ 0.53
SMARCD3-207ENST00000472103 GRAPQ13588 217 aa18.34■□□□□ 0.53
SMARCD3-207ENST00000472103 CEP85Q6P2H3 762 aa18.34■□□□□ 0.53
SMARCD3-207ENST00000472103 OLFM4Q6UX06 510 aa18.34■□□□□ 0.53
SMARCD3-207ENST00000472103 KLHDC4Q8TBB5 520 aa18.34■□□□□ 0.53
SMARCD3-207ENST00000472103 GRAPLQ8TC17 118 aaPredicted RBP18.34■□□□□ 0.53
SMARCD3-207ENST00000472103 PIM2Q9P1W9 311 aa18.34■□□□□ 0.53
SMARCD3-207ENST00000472103 MTX1Q13505 466 aa18.33■□□□□ 0.52
SMARCD3-207ENST00000472103 PRPF40BQ6NWY9 871 aaKnown RBP18.33■□□□□ 0.52
SMARCD3-207ENST00000472103 SIRT2Q8IXJ6 389 aa18.33■□□□□ 0.52
SMARCD3-207ENST00000472103 TTLL6Q8N841 843 aa18.33■□□□□ 0.52
SMARCD3-207ENST00000472103 CNKSR1Q969H4 720 aa18.33■□□□□ 0.52
SMARCD3-207ENST00000472103 ZNF219Q9P2Y4 722 aaPredicted RBP18.33■□□□□ 0.52
SMARCD3-207ENST00000472103 ANKRD18BA2A2Z9 1011 aa18.32■□□□□ 0.52
SMARCD3-207ENST00000472103 ATP8B2P98198 1209 aa18.32■□□□□ 0.52
SMARCD3-207ENST00000472103 PA2G4Q9UQ80 394 aaKnown RBP18.32■□□□□ 0.52
SMARCD3-207ENST00000472103 HDAC5Q9UQL6 1122 aa18.32■□□□□ 0.52
SMARCD3-207ENST00000472103 PCDHB15Q9Y5E8 787 aa18.32■□□□□ 0.52
SMARCD3-207ENST00000472103 ALDH1B1P30837 517 aa18.31■□□□□ 0.52
SMARCD3-207ENST00000472103 RPS8P62241 208 aaKnown RBP18.31■□□□□ 0.52
SMARCD3-207ENST00000472103 IFIT5Q13325 482 aaKnown RBP18.31■□□□□ 0.52
SMARCD3-207ENST00000472103 C7orf43Q8WVR3 580 aa18.31■□□□□ 0.52
SMARCD3-207ENST00000472103 PUS3Q9BZE2 481 aaKnown RBP18.31■□□□□ 0.52
SMARCD3-207ENST00000472103 BCS1LQ9Y276 419 aa18.31■□□□□ 0.52
SMARCD3-207ENST00000472103 ARFGEF1Q9Y6D6 1849 aa18.3■□□□□ 0.52
SMARCD3-207ENST00000472103 LRRC37AA6NMS7 1700 aa18.3■□□□□ 0.52
SMARCD3-207ENST00000472103 PPEF1O14829 653 aaPredicted RBP18.3■□□□□ 0.52
SMARCD3-207ENST00000472103 SRGAP3O43295 1099 aa18.3■□□□□ 0.52
SMARCD3-207ENST00000472103 YBX3P16989 372 aaKnown RBP eCLIP18.3■□□□□ 0.52
SMARCD3-207ENST00000472103 PTPN12Q05209 780 aaKnown RBP18.3■□□□□ 0.52
SMARCD3-207ENST00000472103 POLA2Q14181 598 aa18.3■□□□□ 0.52
SMARCD3-207ENST00000472103 CCDC57Q2TAC2 916 aa18.3■□□□□ 0.52
SMARCD3-207ENST00000472103 DALRD3Q5D0E6 543 aaKnown RBP18.3■□□□□ 0.52
SMARCD3-207ENST00000472103 ANKRD18AQ8IVF6 992 aa18.3■□□□□ 0.52
SMARCD3-207ENST00000472103 CHMP4BQ9H444 224 aaKnown RBP18.3■□□□□ 0.52
SMARCD3-207ENST00000472103 C21orf2O43822 256 aa18.29■□□□□ 0.52
SMARCD3-207ENST00000472103 SSH3Q8TE77 659 aa18.29■□□□□ 0.52
SMARCD3-207ENST00000472103 CDC5LQ99459 802 aaKnown RBP18.29■□□□□ 0.52
SMARCD3-207ENST00000472103 A0A1B0GUL6 1792 aa18.29■□□□□ 0.52
SMARCD3-207ENST00000472103 LRRC24Q50LG9 513 aa18.28■□□□□ 0.52
SMARCD3-207ENST00000472103 PELP1Q8IZL8 1130 aaKnown RBP18.28■□□□□ 0.52
SMARCD3-207ENST00000472103 SNED1Q8TER0 1413 aa18.28■□□□□ 0.52
SMARCD3-207ENST00000472103 BBOX1O75936 387 aa18.27■□□□□ 0.52
SMARCD3-207ENST00000472103 IGHMBP2P38935 993 aaKnown RBP18.27■□□□□ 0.52
SMARCD3-207ENST00000472103 RPAP2Q8IXW5 612 aaPredicted RBP18.27■□□□□ 0.52
SMARCD3-207ENST00000472103 BSDC1Q9NW68 430 aaPredicted RBP18.27■□□□□ 0.52
SMARCD3-207ENST00000472103 ATP6V0A2Q9Y487 856 aa18.27■□□□□ 0.52
SMARCD3-207ENST00000472103 TAF7LQ5H9L4 462 aa18.26■□□□□ 0.51
SMARCD3-207ENST00000472103 SP8Q8IXZ3 490 aa18.26■□□□□ 0.51
SMARCD3-207ENST00000472103 SIL1Q9H173 461 aa18.26■□□□□ 0.51
SMARCD3-207ENST00000472103 COPRSQ9NQ92 184 aa18.26■□□□□ 0.51
SMARCD3-207ENST00000472103 WTIPA6NIX2 430 aaPredicted RBP18.25■□□□□ 0.51
SMARCD3-207ENST00000472103 LDHAL6AQ6ZMR3 332 aa18.25■□□□□ 0.51
SMARCD3-207ENST00000472103 ATG9AQ7Z3C6 839 aa18.25■□□□□ 0.51
SMARCD3-207ENST00000472103 MPHOSPH8Q99549 860 aa18.25■□□□□ 0.51
SMARCD3-207ENST00000472103 MINPP1Q9UNW1 487 aa18.25■□□□□ 0.51
SMARCD3-207ENST00000472103 RIPOR2Q9Y4F9 1068 aa18.25■□□□□ 0.51
SMARCD3-207ENST00000472103 LTBP1Q14766 1721 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms