RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 CDHR2Q9BYE9 1310 aa11.66□□□□□ -0.54
SYN3-211ENST00000472027 H7C1W4 665 aa11.66□□□□□ -0.54
SYN3-211ENST00000472027 IARSP41252 1262 aaKnown RBP11.66□□□□□ -0.54
SYN3-211ENST00000472027 C1QTNF8P60827 252 aa11.66□□□□□ -0.54
SYN3-211ENST00000472027 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
SYN3-211ENST00000472027 CELF1Q92879 486 aaKnown RBP11.66□□□□□ -0.54
SYN3-211ENST00000472027 RRAGCQ9HB90 399 aa11.66□□□□□ -0.54
SYN3-211ENST00000472027 NMRK2Q9NPI5 230 aa11.66□□□□□ -0.54
SYN3-211ENST00000472027 SNED1Q8TER0 1413 aa11.66□□□□□ -0.54
SYN3-211ENST00000472027 CCDC152Q4G0S7 254 aa11.65□□□□□ -0.54
SYN3-211ENST00000472027 BEND3Q5T5X7 828 aa11.65□□□□□ -0.54
SYN3-211ENST00000472027 TMC4Q7Z404 712 aa11.65□□□□□ -0.54
SYN3-211ENST00000472027 SSH1Q8WYL5 1049 aa11.65□□□□□ -0.54
SYN3-211ENST00000472027 CCDC85AQ96PX6 553 aaPredicted RBP11.65□□□□□ -0.54
SYN3-211ENST00000472027 SEC31BQ9NQW1 1179 aa11.65□□□□□ -0.54
SYN3-211ENST00000472027 DDX60Q8IY21 1712 aaKnown RBP11.64□□□□□ -0.55
SYN3-211ENST00000472027 RPS8P62241 208 aaKnown RBP11.64□□□□□ -0.55
SYN3-211ENST00000472027 HNRNPUQ00839 825 aaKnown RBP eCLIP11.64□□□□□ -0.55
SYN3-211ENST00000472027 ALDH1L2Q3SY69 923 aa11.64□□□□□ -0.55
SYN3-211ENST00000472027 SLC4A10Q6U841 1118 aa11.64□□□□□ -0.55
SYN3-211ENST00000472027 DPP8Q6V1X1 898 aaPredicted RBP11.64□□□□□ -0.55
SYN3-211ENST00000472027 UBE3BQ7Z3V4 1068 aa11.64□□□□□ -0.55
SYN3-211ENST00000472027 MPNDQ8N594 471 aa11.64□□□□□ -0.55
SYN3-211ENST00000472027 TTLL11Q8NHH1 800 aa11.64□□□□□ -0.55
SYN3-211ENST00000472027 BCL2L13Q9BXK5 485 aa11.64□□□□□ -0.55
SYN3-211ENST00000472027 LAMB2P55268 1798 aa11.64□□□□□ -0.55
SYN3-211ENST00000472027 FZD9O00144 591 aa11.63□□□□□ -0.55
SYN3-211ENST00000472027 DDNO94850 711 aaPredicted RBP11.63□□□□□ -0.55
SYN3-211ENST00000472027 CT47B1P0C2W7 299 aaPredicted RBP11.63□□□□□ -0.55
SYN3-211ENST00000472027 CASP7P55210 303 aa11.63□□□□□ -0.55
SYN3-211ENST00000472027 CTSWP56202 376 aa11.63□□□□□ -0.55
SYN3-211ENST00000472027 SUPT20HQ8NEM7 779 aa11.63□□□□□ -0.55
SYN3-211ENST00000472027 JDP2Q8WYK2 163 aa11.63□□□□□ -0.55
SYN3-211ENST00000472027 RTFDC1Q9BY42 306 aaPredicted RBP11.63□□□□□ -0.55
SYN3-211ENST00000472027 VPS33BQ9H267 617 aa11.63□□□□□ -0.55
SYN3-211ENST00000472027 CCDC88AQ3V6T2 1871 aa11.62□□□□□ -0.55
SYN3-211ENST00000472027 POTECB2RU33 542 aa11.62□□□□□ -0.55
SYN3-211ENST00000472027 TOMM70O94826 608 aa11.62□□□□□ -0.55
SYN3-211ENST00000472027 VEGFAP15692 232 aaPredicted RBP11.62□□□□□ -0.55
SYN3-211ENST00000472027 LARGE2Q8N3Y3 721 aa11.62□□□□□ -0.55
SYN3-211ENST00000472027 PLA2G12BQ9BX93 195 aa11.62□□□□□ -0.55
SYN3-211ENST00000472027 SRCIN1Q9C0H9 1055 aa11.62□□□□□ -0.55
SYN3-211ENST00000472027 NSFL1CQ9UNZ2 370 aaKnown RBP11.62□□□□□ -0.55
SYN3-211ENST00000472027 PTPRCP08575 1304 aa11.61□□□□□ -0.55
SYN3-211ENST00000472027 CACNA1FO60840 1977 aa11.61□□□□□ -0.55
SYN3-211ENST00000472027 PPIP5K2O43314 1243 aa11.61□□□□□ -0.55
SYN3-211ENST00000472027 ALDH1L1O75891 902 aa11.61□□□□□ -0.55
SYN3-211ENST00000472027 CSF1RP07333 972 aa11.61□□□□□ -0.55
SYN3-211ENST00000472027 GPSM2P81274 684 aa11.61□□□□□ -0.55
SYN3-211ENST00000472027 AOC3Q16853 763 aa11.61□□□□□ -0.55
SYN3-211ENST00000472027 ANKRD18AQ8IVF6 992 aa11.61□□□□□ -0.55
SYN3-211ENST00000472027 C16orf71Q8IYS4 520 aaPredicted RBP11.61□□□□□ -0.55
SYN3-211ENST00000472027 GREM2Q9H772 168 aa11.61□□□□□ -0.55
SYN3-211ENST00000472027 SMC4Q9NTJ3 1288 aa11.61□□□□□ -0.55
SYN3-211ENST00000472027 ZNF541Q9H0D2 1346 aa11.6□□□□□ -0.55
SYN3-211ENST00000472027 TAF1P21675 1872 aa11.6□□□□□ -0.55
SYN3-211ENST00000472027 GRM8O00222 908 aa11.6□□□□□ -0.55
SYN3-211ENST00000472027 CDC5LQ99459 802 aaKnown RBP11.6□□□□□ -0.55
SYN3-211ENST00000472027 C9orf78Q9NZ63 289 aaPredicted RBP11.6□□□□□ -0.55
SYN3-211ENST00000472027 COL4A1P02462 1669 aa11.59□□□□□ -0.55
SYN3-211ENST00000472027 DICER1Q9UPY3 1922 aaKnown RBP11.59□□□□□ -0.55
SYN3-211ENST00000472027 C6orf229H3BNL8 230 aa11.59□□□□□ -0.55
SYN3-211ENST00000472027 ITGA6P23229 1130 aa11.59□□□□□ -0.55
SYN3-211ENST00000472027 RARSP54136 660 aaKnown RBP11.59□□□□□ -0.55
SYN3-211ENST00000472027 EIF6P56537 245 aaKnown RBP11.59□□□□□ -0.55
SYN3-211ENST00000472027 FOXO4P98177 505 aa11.59□□□□□ -0.55
SYN3-211ENST00000472027 KIAA2012Q0VF49 1180 aa11.59□□□□□ -0.55
SYN3-211ENST00000472027 WASHC4Q2M389 1173 aa11.59□□□□□ -0.55
SYN3-211ENST00000472027 NIM1KQ8IY84 436 aa11.59□□□□□ -0.55
SYN3-211ENST00000472027 POLLQ9UGP5 575 aa11.59□□□□□ -0.55
SYN3-211ENST00000472027 NOB1Q9ULX3 412 aaKnown RBP11.59□□□□□ -0.55
SYN3-211ENST00000472027 TIAM2Q8IVF5 1701 aa11.59□□□□□ -0.55
SYN3-211ENST00000472027 RTL9Q8NET4 1388 aa11.58□□□□□ -0.56
SYN3-211ENST00000472027 BRPF1P55201 1214 aaPredicted RBP11.58□□□□□ -0.56
SYN3-211ENST00000472027 GPC2Q8N158 579 aa11.58□□□□□ -0.56
SYN3-211ENST00000472027 TBC1D16Q8TBP0 767 aa11.58□□□□□ -0.56
SYN3-211ENST00000472027 RBM46Q8TBY0 533 aaKnown RBP11.58□□□□□ -0.56
SYN3-211ENST00000472027 BSDC1Q9NW68 430 aaPredicted RBP11.58□□□□□ -0.56
SYN3-211ENST00000472027 PODXL2Q9NZ53 605 aa11.58□□□□□ -0.56
SYN3-211ENST00000472027 ANKIB1Q9P2G1 1089 aa11.58□□□□□ -0.56
SYN3-211ENST00000472027 ZNRF3Q9ULT6 936 aa11.58□□□□□ -0.56
SYN3-211ENST00000472027 COL4A5P29400 1685 aa11.58□□□□□ -0.56
SYN3-211ENST00000472027 RIMBP2O15034 1052 aa11.57□□□□□ -0.56
SYN3-211ENST00000472027 NBPF7P0C2Y1 421 aaPredicted RBP11.57□□□□□ -0.56
SYN3-211ENST00000472027 IGHMBP2P38935 993 aaKnown RBP11.57□□□□□ -0.56
SYN3-211ENST00000472027 FAM161AQ3B820 660 aa11.57□□□□□ -0.56
SYN3-211ENST00000472027 EPHA10Q5JZY3 1008 aa11.57□□□□□ -0.56
SYN3-211ENST00000472027 LMBR1LQ6UX01 489 aa11.57□□□□□ -0.56
SYN3-211ENST00000472027 L3MBTL3Q96JM7 780 aaPredicted RBP11.57□□□□□ -0.56
SYN3-211ENST00000472027 EYA3Q99504 573 aa11.57□□□□□ -0.56
SYN3-211ENST00000472027 MINPP1Q9UNW1 487 aa11.57□□□□□ -0.56
SYN3-211ENST00000472027 GJA3Q9Y6H8 435 aa11.57□□□□□ -0.56
SYN3-211ENST00000472027 UTYO14607 1347 aa11.57□□□□□ -0.56
SYN3-211ENST00000472027 ANKRD18BA2A2Z9 1011 aa11.56□□□□□ -0.56
SYN3-211ENST00000472027 IQCA1LA6NCM1 817 aa11.56□□□□□ -0.56
SYN3-211ENST00000472027 ATP2B4P23634 1241 aa11.56□□□□□ -0.56
SYN3-211ENST00000472027 CXCL9Q07325 125 aa11.56□□□□□ -0.56
SYN3-211ENST00000472027 IFIT5Q13325 482 aaKnown RBP11.56□□□□□ -0.56
SYN3-211ENST00000472027 KAZALD1Q96I82 304 aa11.56□□□□□ -0.56
SYN3-211ENST00000472027 SUCLG2Q96I99 432 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms