RNA–Protein interactions for RNA: ENST00000472024.2

CHMP2B-204, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 5

Gene CHMP2B, Length 836 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-204ENST00000472024 FBXO3Q9UK99 471 aa24.15■■□□□ 1.46
CHMP2B-204ENST00000472024 FAM177BA6PVY3 158 aa24.14■■□□□ 1.45
CHMP2B-204ENST00000472024 MSH5O43196 834 aa24.14■■□□□ 1.45
CHMP2B-204ENST00000472024 RAB11FIP3O75154 756 aa24.14■■□□□ 1.45
CHMP2B-204ENST00000472024 NUCB1Q02818 461 aa24.14■■□□□ 1.45
CHMP2B-204ENST00000472024 HSP90AB4PQ58FF6 505 aa24.14■■□□□ 1.45
CHMP2B-204ENST00000472024 KLRG2A4D1S0 409 aaPredicted RBP24.13■■□□□ 1.45
CHMP2B-204ENST00000472024 TNRC6CQ9HCJ0 1690 aaKnown RBP24.12■■□□□ 1.45
CHMP2B-204ENST00000472024 FAM161AQ3B820 660 aa24.12■■□□□ 1.45
CHMP2B-204ENST00000472024 CCDC152Q4G0S7 254 aa24.12■■□□□ 1.45
CHMP2B-204ENST00000472024 MMP10P09238 476 aa24.11■■□□□ 1.45
CHMP2B-204ENST00000472024 GREM2Q9H772 168 aa24.11■■□□□ 1.45
CHMP2B-204ENST00000472024 SURF6O75683 361 aaKnown RBP24.1■■□□□ 1.45
CHMP2B-204ENST00000472024 CIAO1O76071 339 aa24.1■■□□□ 1.45
CHMP2B-204ENST00000472024 GTF2E1P29083 439 aaPredicted RBP24.1■■□□□ 1.45
CHMP2B-204ENST00000472024 ST5P78524 1137 aa24.1■■□□□ 1.45
CHMP2B-204ENST00000472024 IFIT5Q13325 482 aaKnown RBP24.1■■□□□ 1.45
CHMP2B-204ENST00000472024 CCDC57Q2TAC2 916 aa24.1■■□□□ 1.45
CHMP2B-204ENST00000472024 CRY2Q49AN0 593 aa24.1■■□□□ 1.45
CHMP2B-204ENST00000472024 C3orf67Q6ZVT6 689 aa24.1■■□□□ 1.45
CHMP2B-204ENST00000472024 PDGFDQ9GZP0 370 aaPredicted RBP24.1■■□□□ 1.45
CHMP2B-204ENST00000472024 PDZRN3Q9UPQ7 1066 aa24.1■■□□□ 1.45
CHMP2B-204ENST00000472024 ITGA6P23229 1130 aa24.09■■□□□ 1.45
CHMP2B-204ENST00000472024 ERC1Q8IUD2 1116 aa24.09■■□□□ 1.45
CHMP2B-204ENST00000472024 NLRP3Q96P20 1036 aa24.09■■□□□ 1.45
CHMP2B-204ENST00000472024 PA2G4Q9UQ80 394 aaKnown RBP24.09■■□□□ 1.45
CHMP2B-204ENST00000472024 EXOC6BQ9Y2D4 811 aa24.09■■□□□ 1.45
CHMP2B-204ENST00000472024 PARP3Q9Y6F1 533 aa24.09■■□□□ 1.45
CHMP2B-204ENST00000472024 ANKRD18BA2A2Z9 1011 aa24.08■■□□□ 1.45
CHMP2B-204ENST00000472024 CHD1LQ86WJ1 897 aa24.08■■□□□ 1.45
CHMP2B-204ENST00000472024 KIF1BPQ96EK5 621 aa24.07■■□□□ 1.44
CHMP2B-204ENST00000472024 BRIP1Q9BX63 1249 aa24.07■■□□□ 1.44
CHMP2B-204ENST00000472024 ANKRD31Q8N7Z5 1873 aa24.07■■□□□ 1.44
CHMP2B-204ENST00000472024 EYA2O00167 538 aa24.06■■□□□ 1.44
CHMP2B-204ENST00000472024 MSL1Q68DK7 614 aa24.06■■□□□ 1.44
CHMP2B-204ENST00000472024 LRRCC1Q9C099 1032 aa24.06■■□□□ 1.44
CHMP2B-204ENST00000472024 CHMP3Q9Y3E7 222 aa24.06■■□□□ 1.44
CHMP2B-204ENST00000472024 IL15P40933 162 aaPredicted RBP24.05■■□□□ 1.44
CHMP2B-204ENST00000472024 G3BP1Q13283 466 aaKnown RBP eCLIP24.05■■□□□ 1.44
CHMP2B-204ENST00000472024 ATG9AQ7Z3C6 839 aa24.05■■□□□ 1.44
CHMP2B-204ENST00000472024 KLHDC4Q8TBB5 520 aa24.05■■□□□ 1.44
CHMP2B-204ENST00000472024 RHPN1Q8TCX5 695 aa24.05■■□□□ 1.44
CHMP2B-204ENST00000472024 MTFR1LQ9H019 292 aa24.05■■□□□ 1.44
CHMP2B-204ENST00000472024 SASH1O94885 1247 aa24.04■■□□□ 1.44
CHMP2B-204ENST00000472024 HOXA10P31260 410 aaPredicted RBP24.04■■□□□ 1.44
CHMP2B-204ENST00000472024 ANKRD45Q5TZF3 282 aa24.04■■□□□ 1.44
CHMP2B-204ENST00000472024 C10orf71Q711Q0 1435 aa24.03■■□□□ 1.44
CHMP2B-204ENST00000472024 CDC5LQ99459 802 aaKnown RBP24.03■■□□□ 1.44
CHMP2B-204ENST00000472024 PDE4AP27815 886 aa24.02■■□□□ 1.44
CHMP2B-204ENST00000472024 R3HDM1Q15032 1099 aaKnown RBP24.02■■□□□ 1.44
CHMP2B-204ENST00000472024 ZNF594Q96JF6 807 aaPredicted RBP24.02■■□□□ 1.44
CHMP2B-204ENST00000472024 GPR108Q9NPR9 543 aa24.02■■□□□ 1.44
CHMP2B-204ENST00000472024 RIPOR2Q9Y4F9 1068 aa24.02■■□□□ 1.44
CHMP2B-204ENST00000472024 SALL3Q9BXA9 1300 aa24.02■■□□□ 1.44
CHMP2B-204ENST00000472024 COL4A1P02462 1669 aa24.02■■□□□ 1.44
CHMP2B-204ENST00000472024 NPHP1O15259 732 aa24.01■■□□□ 1.43
CHMP2B-204ENST00000472024 CCDC85AQ96PX6 553 aaPredicted RBP24.01■■□□□ 1.43
CHMP2B-204ENST00000472024 SEC31BQ9NQW1 1179 aa24.01■■□□□ 1.43
CHMP2B-204ENST00000472024 CCDC24Q8N4L8 307 aa24■■□□□ 1.43
CHMP2B-204ENST00000472024 SGIP1Q9BQI5 828 aa24■■□□□ 1.43
CHMP2B-204ENST00000472024 LNPKQ9C0E8 428 aa24■■□□□ 1.43
CHMP2B-204ENST00000472024 KIF13BQ9NQT8 1826 aa24■■□□□ 1.43
CHMP2B-204ENST00000472024 PDE6BP35913 854 aa23.99■■□□□ 1.43
CHMP2B-204ENST00000472024 LRRC24Q50LG9 513 aa23.99■■□□□ 1.43
CHMP2B-204ENST00000472024 TAF7LQ5H9L4 462 aa23.99■■□□□ 1.43
CHMP2B-204ENST00000472024 PUS3Q9BZE2 481 aaKnown RBP23.99■■□□□ 1.43
CHMP2B-204ENST00000472024 SIL1Q9H173 461 aa23.99■■□□□ 1.43
CHMP2B-204ENST00000472024 OS9Q13438 667 aaPredicted RBP23.98■■□□□ 1.43
CHMP2B-204ENST00000472024 LDHAL6AQ6ZMR3 332 aa23.98■■□□□ 1.43
CHMP2B-204ENST00000472024 CRAMP1Q96RY5 1269 aa23.98■■□□□ 1.43
CHMP2B-204ENST00000472024 BSDC1Q9NW68 430 aaPredicted RBP23.98■■□□□ 1.43
CHMP2B-204ENST00000472024 SRCAPQ6ZRS2 3230 aa23.97■■□□□ 1.43
CHMP2B-204ENST00000472024 SMARCA5O60264 1052 aaPredicted RBP23.97■■□□□ 1.43
CHMP2B-204ENST00000472024 COL11A2P13942 1736 aaPredicted RBP23.97■■□□□ 1.43
CHMP2B-204ENST00000472024 IGHMBP2P38935 993 aaKnown RBP23.97■■□□□ 1.43
CHMP2B-204ENST00000472024 DDX46Q7L014 1031 aaKnown RBP23.97■■□□□ 1.43
CHMP2B-204ENST00000472024 VGLL2Q8N8G2 317 aa23.97■■□□□ 1.43
CHMP2B-204ENST00000472024 MROH5Q6ZUA9 1318 aa23.96■■□□□ 1.43
CHMP2B-204ENST00000472024 SRGNP10124 158 aa23.96■■□□□ 1.43
CHMP2B-204ENST00000472024 GRAPQ13588 217 aa23.96■■□□□ 1.43
CHMP2B-204ENST00000472024 ANKRD18AQ8IVF6 992 aa23.96■■□□□ 1.43
CHMP2B-204ENST00000472024 GRAPLQ8TC17 118 aaPredicted RBP23.96■■□□□ 1.43
CHMP2B-204ENST00000472024 CELF1Q92879 486 aaKnown RBP23.96■■□□□ 1.43
CHMP2B-204ENST00000472024 OSBPL3Q9H4L5 887 aa23.96■■□□□ 1.43
CHMP2B-204ENST00000472024 ZBTB47Q9UFB7 747 aaPredicted RBP23.96■■□□□ 1.43
CHMP2B-204ENST00000472024 RPS8P62241 208 aaKnown RBP23.95■■□□□ 1.42
CHMP2B-204ENST00000472024 CLASRPQ8N2M8 674 aaKnown RBP23.95■■□□□ 1.42
CHMP2B-204ENST00000472024 RBM17Q96I25 401 aaKnown RBP23.95■■□□□ 1.42
CHMP2B-204ENST00000472024 STAP2Q9UGK3 403 aa23.95■■□□□ 1.42
CHMP2B-204ENST00000472024 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.95■■□□□ 1.42
CHMP2B-204ENST00000472024 ZBTB7AO95365 584 aa23.94■■□□□ 1.42
CHMP2B-204ENST00000472024 NPR1P16066 1061 aa23.94■■□□□ 1.42
CHMP2B-204ENST00000472024 TFCP2Q12800 502 aa23.94■■□□□ 1.42
CHMP2B-204ENST00000472024 PLEKHM2Q8IWE5 1019 aa23.94■■□□□ 1.42
CHMP2B-204ENST00000472024 MPHOSPH8Q99549 860 aa23.94■■□□□ 1.42
CHMP2B-204ENST00000472024 ZNF609O15014 1411 aa23.93■■□□□ 1.42
CHMP2B-204ENST00000472024 A0A1B0GUL6 1792 aa23.93■■□□□ 1.42
CHMP2B-204ENST00000472024 AOX1Q06278 1338 aa23.93■■□□□ 1.42
CHMP2B-204ENST00000472024 APBB1O00213 710 aa23.93■■□□□ 1.42
CHMP2B-204ENST00000472024 TMC4Q7Z404 712 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms