RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-208ENST00000471861 UTP14AQ9BVJ6 771 aaKnown RBP26.17■■□□□ 1.78
CCDC78-208ENST00000471861 ANKRD36CQ5JPF3 1778 aa26.17■■□□□ 1.78
CCDC78-208ENST00000471861 CA12O43570 354 aa26.16■■□□□ 1.78
CCDC78-208ENST00000471861 RAD17O75943 681 aa26.16■■□□□ 1.78
CCDC78-208ENST00000471861 SUPT20HQ8NEM7 779 aa26.16■■□□□ 1.78
CCDC78-208ENST00000471861 ZNF408Q9H9D4 720 aa26.16■■□□□ 1.78
CCDC78-208ENST00000471861 CASP8AP2Q9UKL3 1982 aa26.16■■□□□ 1.78
CCDC78-208ENST00000471861 YDJCA8MPS7 323 aa26.15■■□□□ 1.78
CCDC78-208ENST00000471861 ANXA1P04083 346 aa26.15■■□□□ 1.78
CCDC78-208ENST00000471861 DPP8Q6V1X1 898 aaPredicted RBP26.15■■□□□ 1.78
CCDC78-208ENST00000471861 ZIC5Q96T25 663 aa26.15■■□□□ 1.78
CCDC78-208ENST00000471861 SP8Q8IXZ3 490 aa26.14■■□□□ 1.78
CCDC78-208ENST00000471861 ZC3H15Q8WU90 426 aaKnown RBP26.14■■□□□ 1.78
CCDC78-208ENST00000471861 TMX4Q9H1E5 349 aaPredicted RBP26.14■■□□□ 1.78
CCDC78-208ENST00000471861 LRRC37AA6NMS7 1700 aa26.14■■□□□ 1.77
CCDC78-208ENST00000471861 HCLS1P14317 486 aaPredicted RBP26.13■■□□□ 1.77
CCDC78-208ENST00000471861 DLK2Q6UY11 383 aa26.13■■□□□ 1.77
CCDC78-208ENST00000471861 MPNDQ8N594 471 aa26.13■■□□□ 1.77
CCDC78-208ENST00000471861 BBOX1O75936 387 aa26.12■■□□□ 1.77
CCDC78-208ENST00000471861 BCL2L13Q9BXK5 485 aa26.12■■□□□ 1.77
CCDC78-208ENST00000471861 TAF1P21675 1872 aa26.12■■□□□ 1.77
CCDC78-208ENST00000471861 NEFMP07197 916 aa26.11■■□□□ 1.77
CCDC78-208ENST00000471861 NLRP10Q86W26 655 aa26.11■■□□□ 1.77
CCDC78-208ENST00000471861 EIF2S2P20042 333 aaKnown RBP26.1■■□□□ 1.77
CCDC78-208ENST00000471861 CDC37L1Q7L3B6 337 aa26.1■■□□□ 1.77
CCDC78-208ENST00000471861 CNOT7Q9UIV1 285 aaKnown RBP26.1■■□□□ 1.77
CCDC78-208ENST00000471861 TSPYL4Q9UJ04 414 aa26.1■■□□□ 1.77
CCDC78-208ENST00000471861 COL4A1P02462 1669 aa26.09■■□□□ 1.77
CCDC78-208ENST00000471861 GRAPQ13588 217 aa26.09■■□□□ 1.77
CCDC78-208ENST00000471861 TNIP1Q15025 636 aa26.09■■□□□ 1.77
CCDC78-208ENST00000471861 MICALL2Q8IY33 904 aa26.09■■□□□ 1.77
CCDC78-208ENST00000471861 GRAPLQ8TC17 118 aaPredicted RBP26.09■■□□□ 1.77
CCDC78-208ENST00000471861 TNRC18O15417 2968 aaPredicted RBP26.09■■□□□ 1.77
CCDC78-208ENST00000471861 DGKZQ13574 1117 aa26.08■■□□□ 1.77
CCDC78-208ENST00000471861 CFAP44Q96MT7 982 aa26.08■■□□□ 1.77
CCDC78-208ENST00000471861 ZBTB12Q9Y330 459 aaPredicted RBP26.08■■□□□ 1.77
CCDC78-208ENST00000471861 NOGQ13253 232 aa26.07■■□□□ 1.76
CCDC78-208ENST00000471861 USP48Q86UV5 1035 aa26.07■■□□□ 1.76
CCDC78-208ENST00000471861 DDX60Q8IY21 1712 aaKnown RBP26.07■■□□□ 1.76
CCDC78-208ENST00000471861 EGFRP00533 1210 aa26.06■■□□□ 1.76
CCDC78-208ENST00000471861 HUNKP57058 714 aa26.06■■□□□ 1.76
CCDC78-208ENST00000471861 DDX46Q7L014 1031 aaKnown RBP26.06■■□□□ 1.76
CCDC78-208ENST00000471861 COPS6Q7L5N1 327 aa26.06■■□□□ 1.76
CCDC78-208ENST00000471861 FAM155AB1AL88 458 aaPredicted RBP26.05■■□□□ 1.76
CCDC78-208ENST00000471861 SAMD7Q7Z3H4 446 aa26.05■■□□□ 1.76
CCDC78-208ENST00000471861 XAGE3Q8WTP9 111 aa26.05■■□□□ 1.76
CCDC78-208ENST00000471861 AIMP1Q12904 312 aaKnown RBP26.04■■□□□ 1.76
CCDC78-208ENST00000471861 HSP90AB3PQ58FF7 597 aa26.04■■□□□ 1.76
CCDC78-208ENST00000471861 NECTIN2Q92692 538 aa26.04■■□□□ 1.76
CCDC78-208ENST00000471861 ZNF428Q96B54 188 aa26.04■■□□□ 1.76
CCDC78-208ENST00000471861 TRMT112Q9UI30 125 aaKnown RBP26.04■■□□□ 1.76
CCDC78-208ENST00000471861 SH3TC1Q8TE82 1336 aa26.04■■□□□ 1.76
CCDC78-208ENST00000471861 MAPK8IP3Q9UPT6 1336 aa26.04■■□□□ 1.76
CCDC78-208ENST00000471861 H7C1D1 291 aa26.03■■□□□ 1.76
CCDC78-208ENST00000471861 PSMD14O00487 310 aa26.03■■□□□ 1.76
CCDC78-208ENST00000471861 TCIRG1Q13488 830 aa26.03■■□□□ 1.76
CCDC78-208ENST00000471861 TBC1D10BQ4KMP7 808 aaPredicted RBP26.01■■□□□ 1.75
CCDC78-208ENST00000471861 RTL9Q8NET4 1388 aa26.01■■□□□ 1.75
CCDC78-208ENST00000471861 DPF2Q92785 391 aa26.01■■□□□ 1.75
CCDC78-208ENST00000471861 DBNDD1Q9H9R9 158 aa26.01■■□□□ 1.75
CCDC78-208ENST00000471861 ADM5C9JUS6 153 aa26■■□□□ 1.75
CCDC78-208ENST00000471861 RGMBQ6NW40 437 aa26■■□□□ 1.75
CCDC78-208ENST00000471861 KRT26Q7Z3Y9 468 aa26■■□□□ 1.75
CCDC78-208ENST00000471861 CELF1Q92879 486 aaKnown RBP26■■□□□ 1.75
CCDC78-208ENST00000471861 KRT24Q2M2I5 525 aa25.99■■□□□ 1.75
CCDC78-208ENST00000471861 TMC4Q7Z404 712 aa25.99■■□□□ 1.75
CCDC78-208ENST00000471861 GBA2Q9HCG7 927 aaPredicted RBP25.99■■□□□ 1.75
CCDC78-208ENST00000471861 KCNQ5Q9NR82 932 aa25.99■■□□□ 1.75
CCDC78-208ENST00000471861 WASHC4Q2M389 1173 aa25.98■■□□□ 1.75
CCDC78-208ENST00000471861 BABAM1Q9NWV8 329 aa25.98■■□□□ 1.75
CCDC78-208ENST00000471861 POLLQ9UGP5 575 aa25.98■■□□□ 1.75
CCDC78-208ENST00000471861 RIPK4P57078 832 aa25.97■■□□□ 1.75
CCDC78-208ENST00000471861 SAGE1Q9NXZ1 904 aa25.97■■□□□ 1.75
CCDC78-208ENST00000471861 POLR2AP24928 1970 aaKnown RBP25.96■■□□□ 1.75
CCDC78-208ENST00000471861 RIMBP2O15034 1052 aa25.96■■□□□ 1.75
CCDC78-208ENST00000471861 GPSM2P81274 684 aa25.96■■□□□ 1.75
CCDC78-208ENST00000471861 NSFL1CQ9UNZ2 370 aaKnown RBP25.96■■□□□ 1.75
CCDC78-208ENST00000471861 SCN9AQ15858 1988 aa25.95■■□□□ 1.75
CCDC78-208ENST00000471861 ECE2O60344 883 aa25.95■■□□□ 1.74
CCDC78-208ENST00000471861 KIF23Q02241 960 aaPredicted RBP25.95■■□□□ 1.74
CCDC78-208ENST00000471861 PNNQ9H307 717 aaKnown RBP25.95■■□□□ 1.74
CCDC78-208ENST00000471861 SF3B3Q15393 1217 aaKnown RBP25.94■■□□□ 1.74
CCDC78-208ENST00000471861 FAM89AQ96GI7 184 aa25.94■■□□□ 1.74
CCDC78-208ENST00000471861 CHPF2Q9P2E5 772 aa25.94■■□□□ 1.74
CCDC78-208ENST00000471861 ASTN2O75129 1339 aaPredicted RBP25.93■■□□□ 1.74
CCDC78-208ENST00000471861 RPS12P25398 132 aaKnown RBP25.93■■□□□ 1.74
CCDC78-208ENST00000471861 TMPOP42166 694 aaKnown RBP25.93■■□□□ 1.74
CCDC78-208ENST00000471861 DOK7Q18PE1 504 aa25.93■■□□□ 1.74
CCDC78-208ENST00000471861 RBM26Q5T8P6 1007 aaKnown RBP25.93■■□□□ 1.74
CCDC78-208ENST00000471861 C2orf69Q8N8R5 385 aa25.93■■□□□ 1.74
CCDC78-208ENST00000471861 ISCA1Q9BUE6 129 aa25.93■■□□□ 1.74
CCDC78-208ENST00000471861 RNF186Q9NXI6 227 aa25.93■■□□□ 1.74
CCDC78-208ENST00000471861 PDE4DIPQ5VU43 2346 aa25.92■■□□□ 1.74
CCDC78-208ENST00000471861 SLC10A3P09131 477 aa25.92■■□□□ 1.74
CCDC78-208ENST00000471861 ZNF157P51786 506 aaPredicted RBP25.92■■□□□ 1.74
CCDC78-208ENST00000471861 SOX10P56693 466 aa25.92■■□□□ 1.74
CCDC78-208ENST00000471861 CCDC102AQ96A19 550 aa25.92■■□□□ 1.74
CCDC78-208ENST00000471861 DCPSQ96C86 337 aaKnown RBP25.92■■□□□ 1.74
CCDC78-208ENST00000471861 GGA3Q9NZ52 723 aa25.92■■□□□ 1.74
CCDC78-208ENST00000471861 C6orf229H3BNL8 230 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms