RNA–Protein interactions for RNA: ENST00000471496.5

LINC00888-202, long intergenic non-protein coding RNA 888, humanhuman

TSL 3 BASIC

Gene LINC00888, Length 1,490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-202ENST00000471496 PARP10Q53GL7 1025 aa15.91■□□□□ 0.14
LINC00888-202ENST00000471496 HSP90AB3PQ58FF7 597 aa15.91■□□□□ 0.14
LINC00888-202ENST00000471496 PDCD7Q8N8D1 485 aaKnown RBP15.91■□□□□ 0.14
LINC00888-202ENST00000471496 RNF25Q96BH1 459 aaPredicted RBP15.91■□□□□ 0.14
LINC00888-202ENST00000471496 L3MBTL3Q96JM7 780 aaPredicted RBP15.91■□□□□ 0.14
LINC00888-202ENST00000471496 STK31Q9BXU1 1019 aa15.91■□□□□ 0.14
LINC00888-202ENST00000471496 ADCY9O60503 1353 aa15.91■□□□□ 0.14
LINC00888-202ENST00000471496 SRGNP10124 158 aa15.91■□□□□ 0.14
LINC00888-202ENST00000471496 NYXQ9GZU5 481 aa15.91■□□□□ 0.14
LINC00888-202ENST00000471496 BCS1LQ9Y276 419 aa15.91■□□□□ 0.14
LINC00888-202ENST00000471496 H0YIN7 160 aa15.9■□□□□ 0.14
LINC00888-202ENST00000471496 NPHP1O15259 732 aa15.9■□□□□ 0.14
LINC00888-202ENST00000471496 GRIN3BO60391 1043 aa15.9■□□□□ 0.14
LINC00888-202ENST00000471496 TRIM28Q13263 835 aaKnown RBP15.9■□□□□ 0.14
LINC00888-202ENST00000471496 PDZRN3Q9UPQ7 1066 aa15.9■□□□□ 0.14
LINC00888-202ENST00000471496 ATP5J2-PTCD1G3V325 749 aa15.89■□□□□ 0.13
LINC00888-202ENST00000471496 DALRD3Q5D0E6 543 aaKnown RBP15.89■□□□□ 0.13
LINC00888-202ENST00000471496 PPP1R42Q7Z4L9 355 aa15.89■□□□□ 0.13
LINC00888-202ENST00000471496 RIC3Q7Z5B4 369 aa15.89■□□□□ 0.13
LINC00888-202ENST00000471496 SYNE4Q8N205 404 aa15.89■□□□□ 0.13
LINC00888-202ENST00000471496 PI4KAP2A4QPH2 592 aa15.88■□□□□ 0.13
LINC00888-202ENST00000471496 FLIIQ13045 1269 aa15.88■□□□□ 0.13
LINC00888-202ENST00000471496 CRY2Q49AN0 593 aa15.88■□□□□ 0.13
LINC00888-202ENST00000471496 SLC10A5Q5PT55 438 aa15.88■□□□□ 0.13
LINC00888-202ENST00000471496 KSR2Q6VAB6 950 aa15.88■□□□□ 0.13
LINC00888-202ENST00000471496 C3orf67Q6ZVT6 689 aa15.88■□□□□ 0.13
LINC00888-202ENST00000471496 PI4KAP1Q8N8J0 262 aa15.88■□□□□ 0.13
LINC00888-202ENST00000471496 ZNF428Q96B54 188 aa15.88■□□□□ 0.13
LINC00888-202ENST00000471496 UTP14AQ9BVJ6 771 aaKnown RBP15.88■□□□□ 0.13
LINC00888-202ENST00000471496 SBF1O95248 1867 aa15.88■□□□□ 0.13
LINC00888-202ENST00000471496 ECM2O94769 699 aaPredicted RBP15.87■□□□□ 0.13
LINC00888-202ENST00000471496 GTF2E1P29083 439 aaPredicted RBP15.87■□□□□ 0.13
LINC00888-202ENST00000471496 HNRNPUQ00839 825 aaKnown RBP eCLIP15.87■□□□□ 0.13
LINC00888-202ENST00000471496 RNF123Q5XPI4 1314 aa15.87■□□□□ 0.13
LINC00888-202ENST00000471496 STYK1Q6J9G0 422 aa15.87■□□□□ 0.13
LINC00888-202ENST00000471496 TTLL6Q8N841 843 aa15.87■□□□□ 0.13
LINC00888-202ENST00000471496 METTL22Q9BUU2 404 aaPredicted RBP15.87■□□□□ 0.13
LINC00888-202ENST00000471496 MAP3K2Q9Y2U5 619 aa15.87■□□□□ 0.13
LINC00888-202ENST00000471496 FER1L6Q2WGJ9 1857 aa15.86■□□□□ 0.13
LINC00888-202ENST00000471496 DDX58O95786 925 aaKnown RBP15.86■□□□□ 0.13
LINC00888-202ENST00000471496 MASTLQ96GX5 879 aa15.86■□□□□ 0.13
LINC00888-202ENST00000471496 MYD88Q99836 296 aa15.86■□□□□ 0.13
LINC00888-202ENST00000471496 IGKV5-2P06315 115 aa15.85■□□□□ 0.13
LINC00888-202ENST00000471496 ZNF622Q969S3 477 aaKnown RBP eCLIP15.85■□□□□ 0.13
LINC00888-202ENST00000471496 TRMT112Q9UI30 125 aaKnown RBP15.85■□□□□ 0.13
LINC00888-202ENST00000471496 TAF1P21675 1872 aa15.85■□□□□ 0.13
LINC00888-202ENST00000471496 SH3TC1Q8TE82 1336 aa15.85■□□□□ 0.13
LINC00888-202ENST00000471496 NPR1P16066 1061 aa15.84■□□□□ 0.13
LINC00888-202ENST00000471496 CCDC88AQ3V6T2 1871 aa15.84■□□□□ 0.13
LINC00888-202ENST00000471496 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.84■□□□□ 0.13
LINC00888-202ENST00000471496 CCDC191Q8NCU4 936 aa15.84■□□□□ 0.13
LINC00888-202ENST00000471496 C7orf43Q8WVR3 580 aa15.84■□□□□ 0.13
LINC00888-202ENST00000471496 FAM89AQ96GI7 184 aa15.84■□□□□ 0.13
LINC00888-202ENST00000471496 ZFP91Q96JP5 570 aaPredicted RBP15.84■□□□□ 0.13
LINC00888-202ENST00000471496 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.84■□□□□ 0.13
LINC00888-202ENST00000471496 HCLS1P14317 486 aaPredicted RBP15.83■□□□□ 0.12
LINC00888-202ENST00000471496 HOXA10P31260 410 aaPredicted RBP15.83■□□□□ 0.12
LINC00888-202ENST00000471496 FKBP5Q13451 457 aaPredicted RBP15.83■□□□□ 0.12
LINC00888-202ENST00000471496 PRPF40BQ6NWY9 871 aaKnown RBP15.83■□□□□ 0.12
LINC00888-202ENST00000471496 MRPL50Q8N5N7 158 aaKnown RBP15.83■□□□□ 0.12
LINC00888-202ENST00000471496 SLAIN1Q8ND83 568 aa15.83■□□□□ 0.12
LINC00888-202ENST00000471496 SSH1Q8WYL5 1049 aa15.83■□□□□ 0.12
LINC00888-202ENST00000471496 CNKSR1Q969H4 720 aa15.83■□□□□ 0.12
LINC00888-202ENST00000471496 YY1P25490 414 aa15.82■□□□□ 0.12
LINC00888-202ENST00000471496 CWF19L2Q2TBE0 894 aaKnown RBP15.82■□□□□ 0.12
LINC00888-202ENST00000471496 ARHGAP27Q6ZUM4 889 aa15.82■□□□□ 0.12
LINC00888-202ENST00000471496 COL4A1P02462 1669 aa15.82■□□□□ 0.12
LINC00888-202ENST00000471496 MYH3P11055 1940 aa15.81■□□□□ 0.12
LINC00888-202ENST00000471496 NEURL1BA8MQ27 555 aa15.81■□□□□ 0.12
LINC00888-202ENST00000471496 F6X3S4 739 aa15.81■□□□□ 0.12
LINC00888-202ENST00000471496 C21orf2O43822 256 aa15.81■□□□□ 0.12
LINC00888-202ENST00000471496 ZBTB38Q8NAP3 1195 aaPredicted RBP15.81■□□□□ 0.12
LINC00888-202ENST00000471496 DNAAF4Q8WXU2 420 aa15.81■□□□□ 0.12
LINC00888-202ENST00000471496 NLRP3Q96P20 1036 aa15.81■□□□□ 0.12
LINC00888-202ENST00000471496 CWC25Q9NXE8 425 aaPredicted RBP15.81■□□□□ 0.12
LINC00888-202ENST00000471496 ZBED9Q6R2W3 1325 aa15.8■□□□□ 0.12
LINC00888-202ENST00000471496 PCCAP05165 728 aaPredicted RBP15.8■□□□□ 0.12
LINC00888-202ENST00000471496 PRELPP51888 382 aa15.8■□□□□ 0.12
LINC00888-202ENST00000471496 RTL5Q5HYW3 569 aaPredicted RBP15.8■□□□□ 0.12
LINC00888-202ENST00000471496 SNED1Q8TER0 1413 aa15.8■□□□□ 0.12
LINC00888-202ENST00000471496 NFKBIEO00221 500 aa15.79■□□□□ 0.12
LINC00888-202ENST00000471496 CT47B1P0C2W7 299 aaPredicted RBP15.79■□□□□ 0.12
LINC00888-202ENST00000471496 ALDH1L2Q3SY69 923 aa15.79■□□□□ 0.12
LINC00888-202ENST00000471496 SLC51AQ86UW1 340 aa15.79■□□□□ 0.12
LINC00888-202ENST00000471496 EFCAB3Q8N7B9 438 aa15.79■□□□□ 0.12
LINC00888-202ENST00000471496 JARID2Q92833 1246 aaPredicted RBP15.79■□□□□ 0.12
LINC00888-202ENST00000471496 CRAMP1Q96RY5 1269 aa15.79■□□□□ 0.12
LINC00888-202ENST00000471496 BCL2L13Q9BXK5 485 aa15.79■□□□□ 0.12
LINC00888-202ENST00000471496 DICER1Q9UPY3 1922 aaKnown RBP15.79■□□□□ 0.12
LINC00888-202ENST00000471496 IRS4O14654 1257 aaPredicted RBP15.78■□□□□ 0.12
LINC00888-202ENST00000471496 ALDH1B1P30837 517 aa15.78■□□□□ 0.12
LINC00888-202ENST00000471496 NEXNQ0ZGT2 675 aa15.78■□□□□ 0.12
LINC00888-202ENST00000471496 BEND3Q5T5X7 828 aa15.78■□□□□ 0.12
LINC00888-202ENST00000471496 OLFM4Q6UX06 510 aa15.78■□□□□ 0.12
LINC00888-202ENST00000471496 LINS1Q8NG48 757 aa15.78■□□□□ 0.12
LINC00888-202ENST00000471496 RPGRQ92834 1020 aaKnown RBP15.78■□□□□ 0.12
LINC00888-202ENST00000471496 RASSF7Q02833 373 aa15.78■□□□□ 0.12
LINC00888-202ENST00000471496 GCKRQ14397 625 aa15.78■□□□□ 0.12
LINC00888-202ENST00000471496 SF3B3Q15393 1217 aaKnown RBP15.78■□□□□ 0.12
LINC00888-202ENST00000471496 ABCC4O15439 1325 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms