RNA–Protein interactions for RNA: ENST00000471373.5

CLDN11-203, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-203ENST00000471373 VPS33BQ9H267 617 aa16.96■□□□□ 0.31
CLDN11-203ENST00000471373 GJA3Q9Y6H8 435 aa16.96■□□□□ 0.31
CLDN11-203ENST00000471373 COL4A5P29400 1685 aa16.96■□□□□ 0.31
CLDN11-203ENST00000471373 ABCC4O15439 1325 aa16.96■□□□□ 0.3
CLDN11-203ENST00000471373 CNTNAP1P78357 1384 aa16.95■□□□□ 0.3
CLDN11-203ENST00000471373 TMEM88BA6NKF7 163 aa16.95■□□□□ 0.3
CLDN11-203ENST00000471373 BBOX1O75936 387 aa16.95■□□□□ 0.3
CLDN11-203ENST00000471373 HCLS1P14317 486 aaPredicted RBP16.95■□□□□ 0.3
CLDN11-203ENST00000471373 EXOSC9Q06265 439 aaKnown RBP16.95■□□□□ 0.3
CLDN11-203ENST00000471373 GOLGA2Q08379 1002 aa16.95■□□□□ 0.3
CLDN11-203ENST00000471373 CNTROBQ8N137 903 aa16.95■□□□□ 0.3
CLDN11-203ENST00000471373 TRMT112Q9UI30 125 aaKnown RBP16.95■□□□□ 0.3
CLDN11-203ENST00000471373 SH3TC1Q8TE82 1336 aa16.95■□□□□ 0.3
CLDN11-203ENST00000471373 PPIP5K2O43314 1243 aa16.94■□□□□ 0.3
CLDN11-203ENST00000471373 LMOD1P29536 600 aaPredicted RBP16.94■□□□□ 0.3
CLDN11-203ENST00000471373 SCNN1DP51172 638 aa16.94■□□□□ 0.3
CLDN11-203ENST00000471373 MAP1SQ66K74 1059 aaPredicted RBP16.94■□□□□ 0.3
CLDN11-203ENST00000471373 NIM1KQ8IY84 436 aa16.94■□□□□ 0.3
CLDN11-203ENST00000471373 RTFDC1Q9BY42 306 aaPredicted RBP16.94■□□□□ 0.3
CLDN11-203ENST00000471373 MYH16Q9H6N6 1097 aa16.94■□□□□ 0.3
CLDN11-203ENST00000471373 HYPKQ9NX55 129 aa16.94■□□□□ 0.3
CLDN11-203ENST00000471373 ANKRD36CQ5JPF3 1778 aa16.93■□□□□ 0.3
CLDN11-203ENST00000471373 CCDC30Q5VVM6 783 aa16.93■□□□□ 0.3
CLDN11-203ENST00000471373 SP8Q8IXZ3 490 aa16.93■□□□□ 0.3
CLDN11-203ENST00000471373 SUPT20HQ8NEM7 779 aa16.93■□□□□ 0.3
CLDN11-203ENST00000471373 PLBD2Q8NHP8 589 aa16.93■□□□□ 0.3
CLDN11-203ENST00000471373 PHAXQ9H814 394 aaKnown RBP16.93■□□□□ 0.3
CLDN11-203ENST00000471373 ADAMTSL1Q8N6G6 1762 aa16.92■□□□□ 0.3
CLDN11-203ENST00000471373 EPS15P42566 896 aa16.92■□□□□ 0.3
CLDN11-203ENST00000471373 AOC3Q16853 763 aa16.92■□□□□ 0.3
CLDN11-203ENST00000471373 ANKRD13DQ6ZTN6 518 aa16.92■□□□□ 0.3
CLDN11-203ENST00000471373 DDX46Q7L014 1031 aaKnown RBP16.92■□□□□ 0.3
CLDN11-203ENST00000471373 TNS4Q8IZW8 715 aa16.92■□□□□ 0.3
CLDN11-203ENST00000471373 GRAPQ13588 217 aa16.91■□□□□ 0.3
CLDN11-203ENST00000471373 DPP8Q6V1X1 898 aaPredicted RBP16.91■□□□□ 0.3
CLDN11-203ENST00000471373 GRAPLQ8TC17 118 aaPredicted RBP16.91■□□□□ 0.3
CLDN11-203ENST00000471373 ISCA1Q9BUE6 129 aa16.91■□□□□ 0.3
CLDN11-203ENST00000471373 ZNRF3Q9ULT6 936 aa16.91■□□□□ 0.3
CLDN11-203ENST00000471373 VAMP4O75379 141 aa16.9■□□□□ 0.3
CLDN11-203ENST00000471373 USP50Q70EL3 339 aaPredicted RBP16.9■□□□□ 0.3
CLDN11-203ENST00000471373 MPNDQ8N594 471 aa16.9■□□□□ 0.3
CLDN11-203ENST00000471373 CDCA7LQ96GN5 454 aa16.9■□□□□ 0.3
CLDN11-203ENST00000471373 RASSF10A6NK89 507 aa16.89■□□□□ 0.29
CLDN11-203ENST00000471373 VEGFBP49765 207 aa16.89■□□□□ 0.29
CLDN11-203ENST00000471373 CXCL9Q07325 125 aa16.89■□□□□ 0.29
CLDN11-203ENST00000471373 KIAA2012Q0VF49 1180 aa16.89■□□□□ 0.29
CLDN11-203ENST00000471373 TMC4Q7Z404 712 aa16.89■□□□□ 0.29
CLDN11-203ENST00000471373 STK31Q9BXU1 1019 aa16.89■□□□□ 0.29
CLDN11-203ENST00000471373 E9PSI1 815 aa16.88■□□□□ 0.29
CLDN11-203ENST00000471373 SLFN5Q08AF3 891 aa16.88■□□□□ 0.29
CLDN11-203ENST00000471373 G2E3Q7L622 706 aa16.88■□□□□ 0.29
CLDN11-203ENST00000471373 ZNF428Q96B54 188 aa16.88■□□□□ 0.29
CLDN11-203ENST00000471373 CHMP4AQ9BY43 222 aa16.88■□□□□ 0.29
CLDN11-203ENST00000471373 GPRC5DQ9NZD1 345 aa16.88■□□□□ 0.29
CLDN11-203ENST00000471373 ATP5J2-PTCD1G3V325 749 aa16.87■□□□□ 0.29
CLDN11-203ENST00000471373 SLC4A2P04920 1241 aa16.87■□□□□ 0.29
CLDN11-203ENST00000471373 TRIM28Q13263 835 aaKnown RBP16.87■□□□□ 0.29
CLDN11-203ENST00000471373 SF3B3Q15393 1217 aaKnown RBP16.87■□□□□ 0.29
CLDN11-203ENST00000471373 FAM89AQ96GI7 184 aa16.87■□□□□ 0.29
CLDN11-203ENST00000471373 ADARB2Q9NS39 739 aaKnown RBP16.87■□□□□ 0.29
CLDN11-203ENST00000471373 LTBP1Q14766 1721 aa16.87■□□□□ 0.29
CLDN11-203ENST00000471373 PCNTO95613 3336 aa16.86■□□□□ 0.29
CLDN11-203ENST00000471373 DEFB115Q30KQ5 88 aa16.86■□□□□ 0.29
CLDN11-203ENST00000471373 CIAPIN1Q6FI81 312 aa16.86■□□□□ 0.29
CLDN11-203ENST00000471373 RIC3Q7Z5B4 369 aa16.86■□□□□ 0.29
CLDN11-203ENST00000471373 FOXN1O15353 648 aa16.85■□□□□ 0.29
CLDN11-203ENST00000471373 GMPSP49915 693 aaPredicted RBP16.85■□□□□ 0.29
CLDN11-203ENST00000471373 ABT1Q9ULW3 272 aaKnown RBP16.85■□□□□ 0.29
CLDN11-203ENST00000471373 CDHR2Q9BYE9 1310 aa16.85■□□□□ 0.29
CLDN11-203ENST00000471373 HNRNPUQ00839 825 aaKnown RBP eCLIP16.84■□□□□ 0.29
CLDN11-203ENST00000471373 TNIP1Q15025 636 aa16.84■□□□□ 0.29
CLDN11-203ENST00000471373 TRMT2AQ8IZ69 625 aaKnown RBP16.84■□□□□ 0.29
CLDN11-203ENST00000471373 CELF1Q92879 486 aaKnown RBP16.84■□□□□ 0.29
CLDN11-203ENST00000471373 AIDAQ96BJ3 306 aa16.84■□□□□ 0.29
CLDN11-203ENST00000471373 WBP1LQ9NX94 342 aa16.84■□□□□ 0.29
CLDN11-203ENST00000471373 IRS4O14654 1257 aaPredicted RBP16.83■□□□□ 0.28
CLDN11-203ENST00000471373 CAPN15O75808 1086 aa16.83■□□□□ 0.28
CLDN11-203ENST00000471373 RAD17O75943 681 aa16.83■□□□□ 0.28
CLDN11-203ENST00000471373 DDX58O95786 925 aaKnown RBP16.83■□□□□ 0.28
CLDN11-203ENST00000471373 FMR1Q06787 632 aaKnown RBP eCLIP16.83■□□□□ 0.28
CLDN11-203ENST00000471373 FLIIQ13045 1269 aa16.83■□□□□ 0.28
CLDN11-203ENST00000471373 RTL5Q5HYW3 569 aaPredicted RBP16.83■□□□□ 0.28
CLDN11-203ENST00000471373 MYD88Q99836 296 aa16.83■□□□□ 0.28
CLDN11-203ENST00000471373 BCL2L13Q9BXK5 485 aa16.83■□□□□ 0.28
CLDN11-203ENST00000471373 WDR33Q9C0J8 1336 aaKnown RBP16.83■□□□□ 0.28
CLDN11-203ENST00000471373 PRDM10Q9NQV6 1147 aa16.83■□□□□ 0.28
CLDN11-203ENST00000471373 MAP3K2Q9Y2U5 619 aa16.83■□□□□ 0.28
CLDN11-203ENST00000471373 PI4KAP2A4QPH2 592 aa16.82■□□□□ 0.28
CLDN11-203ENST00000471373 YDJCA8MPS7 323 aa16.82■□□□□ 0.28
CLDN11-203ENST00000471373 TRAF5O00463 557 aa16.82■□□□□ 0.28
CLDN11-203ENST00000471373 CTCFP49711 727 aaPredicted RBP16.82■□□□□ 0.28
CLDN11-203ENST00000471373 CST9Q5W186 159 aa16.82■□□□□ 0.28
CLDN11-203ENST00000471373 KSR2Q6VAB6 950 aa16.82■□□□□ 0.28
CLDN11-203ENST00000471373 PI4KAP1Q8N8J0 262 aa16.82■□□□□ 0.28
CLDN11-203ENST00000471373 ZBTB38Q8NAP3 1195 aaPredicted RBP16.82■□□□□ 0.28
CLDN11-203ENST00000471373 PGAP2Q9UHJ9 254 aa16.82■□□□□ 0.28
CLDN11-203ENST00000471373 NSFL1CQ9UNZ2 370 aaKnown RBP16.82■□□□□ 0.28
CLDN11-203ENST00000471373 LAMB2P55268 1798 aa16.82■□□□□ 0.28
CLDN11-203ENST00000471373 CACNA1FO60840 1977 aa16.81■□□□□ 0.28
CLDN11-203ENST00000471373 HSP90B1P14625 803 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms