RNA–Protein interactions for RNA: ENST00000471250.5

U2AF1-208, Transcript of U2 small nuclear RNA auxiliary factor 1, human

TSL 2

Gene U2AF1, Length 1,676 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1-208	ENST00000471250	IFIT5	Q13325	482 aa	Known RBP	31.76	■■■□□ 2.68
U2AF1-208	ENST00000471250	TNNI3K	Q59H18	835 aa		31.76	■■■□□ 2.68
U2AF1-208	ENST00000471250	SMIM5	Q71RC9	77 aa		31.76	■■■□□ 2.68
U2AF1-208	ENST00000471250	BCL2L12	Q9HB09	334 aa		31.76	■■■□□ 2.68
U2AF1-208	ENST00000471250	FPGT-TNNI3K	V9GXZ4	949 aa		31.76	■■■□□ 2.68
U2AF1-208	ENST00000471250	TRIM6-TRIM34	B2RNG4	842 aa		31.76	■■■□□ 2.67
U2AF1-208	ENST00000471250	C22orf23	Q9BZE7	217 aa		31.75	■■■□□ 2.67
U2AF1-208	ENST00000471250	LAMB2	P55268	1798 aa		31.75	■■■□□ 2.67
U2AF1-208	ENST00000471250	LRRC24	Q50LG9	513 aa		31.74	■■■□□ 2.67
U2AF1-208	ENST00000471250	USPL1	Q5W0Q7	1092 aa		31.74	■■■□□ 2.67
U2AF1-208	ENST00000471250	ARHGEF1	Q92888	912 aa	Known RBP	31.74	■■■□□ 2.67
U2AF1-208	ENST00000471250	RILPL2	Q969X0	211 aa		31.74	■■■□□ 2.67
U2AF1-208	ENST00000471250	DDRGK1	Q96HY6	314 aa		31.74	■■■□□ 2.67
U2AF1-208	ENST00000471250	CCDC85A	Q96PX6	553 aa	Predicted RBP	31.74	■■■□□ 2.67
U2AF1-208	ENST00000471250	GPR108	Q9NPR9	543 aa		31.74	■■■□□ 2.67
U2AF1-208	ENST00000471250	DDX60	Q8IY21	1712 aa	Known RBP	31.74	■■■□□ 2.67
U2AF1-208	ENST00000471250	FAM177B	A6PVY3	158 aa		31.73	■■■□□ 2.67
U2AF1-208	ENST00000471250	HSP90B1	P14625	803 aa	Known RBP	31.73	■■■□□ 2.67
U2AF1-208	ENST00000471250	GREM2	Q9H772	168 aa		31.73	■■■□□ 2.67
U2AF1-208	ENST00000471250	RGS17	Q9UGC6	210 aa	Predicted RBP	31.73	■■■□□ 2.67
U2AF1-208	ENST00000471250	ZPR1	O75312	459 aa		31.73	■■■□□ 2.67
U2AF1-208	ENST00000471250	AMIGO3	Q86WK7	504 aa		31.73	■■■□□ 2.67
U2AF1-208	ENST00000471250	TLR7	Q9NYK1	1049 aa	Known RBP	31.73	■■■□□ 2.67
U2AF1-208	ENST00000471250	SRP68	Q9UHB9	627 aa	Known RBP	31.73	■■■□□ 2.67
U2AF1-208	ENST00000471250	ANKRD18B	A2A2Z9	1011 aa		31.72	■■■□□ 2.67
U2AF1-208	ENST00000471250	ITGA6	P23229	1130 aa		31.72	■■■□□ 2.67
U2AF1-208	ENST00000471250	PUS3	Q9BZE2	481 aa	Known RBP	31.72	■■■□□ 2.67
U2AF1-208	ENST00000471250	C4A	P0C0L4	1744 aa		31.72	■■■□□ 2.67
U2AF1-208	ENST00000471250	AK9	Q5TCS8	1911 aa		31.71	■■■□□ 2.67
U2AF1-208	ENST00000471250	TAF7L	Q5H9L4	462 aa		31.71	■■■□□ 2.67
U2AF1-208	ENST00000471250	HCLS1	P14317	486 aa	Predicted RBP	31.7	■■■□□ 2.67
U2AF1-208	ENST00000471250	TRAPPC3L	Q5T215	181 aa		31.7	■■■□□ 2.67
U2AF1-208	ENST00000471250	TBC1D9B	Q66K14	1250 aa		31.7	■■■□□ 2.67
U2AF1-208	ENST00000471250	CNTROB	Q8N137	903 aa		31.7	■■■□□ 2.66
U2AF1-208	ENST00000471250	ADRA2B	P18089	450 aa		31.69	■■■□□ 2.66
U2AF1-208	ENST00000471250	HMGB2	P26583	209 aa	Known RBP	31.69	■■■□□ 2.66
U2AF1-208	ENST00000471250	UBR3	Q6ZT12	1888 aa		31.68	■■■□□ 2.66
U2AF1-208	ENST00000471250	DBNL	Q9UJU6	430 aa	Known RBP	31.68	■■■□□ 2.66
U2AF1-208	ENST00000471250	COL24A1	Q17RW2	1714 aa		31.68	■■■□□ 2.66
U2AF1-208	ENST00000471250	MAP4K4	O95819	1239 aa	Predicted RBP	31.67	■■■□□ 2.66
U2AF1-208	ENST00000471250	CHML	P26374	656 aa		31.67	■■■□□ 2.66
U2AF1-208	ENST00000471250	RBM25	P49756	843 aa	Known RBP	31.67	■■■□□ 2.66
U2AF1-208	ENST00000471250	CEP126	Q9P2H0	1117 aa		31.67	■■■□□ 2.66
U2AF1-208	ENST00000471250	RFC4	P35249	363 aa		31.66	■■■□□ 2.66
U2AF1-208	ENST00000471250	POTEA	Q6S8J7	498 aa		31.66	■■■□□ 2.66
U2AF1-208	ENST00000471250	ZNF609	O15014	1411 aa		31.66	■■■□□ 2.66
U2AF1-208	ENST00000471250	PLSCR1	O15162	318 aa		31.65	■■■□□ 2.66
U2AF1-208	ENST00000471250	MSH5	O43196	834 aa		31.65	■■■□□ 2.66
U2AF1-208	ENST00000471250	TXNRD1	Q16881	649 aa		31.65	■■■□□ 2.66
U2AF1-208	ENST00000471250	PHF14	O94880	888 aa		31.64	■■■□□ 2.66
U2AF1-208	ENST00000471250	BICDL1	Q6ZP65	573 aa		31.64	■■■□□ 2.66
U2AF1-208	ENST00000471250	PROM2	Q8N271	834 aa		31.64	■■■□□ 2.66
U2AF1-208	ENST00000471250	SETDB2	Q96T68	719 aa		31.64	■■■□□ 2.66
U2AF1-208	ENST00000471250	DBNDD2	Q9BQY9	259 aa		31.64	■■■□□ 2.66
U2AF1-208	ENST00000471250	RIPOR2	Q9Y4F9	1068 aa		31.64	■■■□□ 2.66
U2AF1-208	ENST00000471250	RTL9	Q8NET4	1388 aa		31.64	■■■□□ 2.66
U2AF1-208	ENST00000471250	ATP5J	P18859	108 aa		31.64	■■■□□ 2.65
U2AF1-208	ENST00000471250	LDHAL6A	Q6ZMR3	332 aa		31.64	■■■□□ 2.65
U2AF1-208	ENST00000471250	LRP5	O75197	1615 aa		31.63	■■■□□ 2.65
U2AF1-208	ENST00000471250	ERFE	Q4G0M1	354 aa		31.63	■■■□□ 2.65
U2AF1-208	ENST00000471250	CCDC152	Q4G0S7	254 aa		31.63	■■■□□ 2.65
U2AF1-208	ENST00000471250	NYX	Q9GZU5	481 aa		31.63	■■■□□ 2.65
U2AF1-208	ENST00000471250	SLC10A5	Q5PT55	438 aa		31.62	■■■□□ 2.65
U2AF1-208	ENST00000471250	EVI5L	Q96CN4	794 aa		31.62	■■■□□ 2.65
U2AF1-208	ENST00000471250	ESYT1	Q9BSJ8	1104 aa		31.62	■■■□□ 2.65
U2AF1-208	ENST00000471250	AKAP2	Q9Y2D5	859 aa		31.61	■■■□□ 2.65
U2AF1-208	ENST00000471250	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	31.6	■■■□□ 2.65
U2AF1-208	ENST00000471250	REC8	O95072	547 aa		31.6	■■■□□ 2.65
U2AF1-208	ENST00000471250	BOLA2	Q9H3K6	86 aa		31.6	■■■□□ 2.65
U2AF1-208	ENST00000471250	RIC1	Q4ADV7	1423 aa		31.6	■■■□□ 2.65
U2AF1-208	ENST00000471250	APBA3	O96018	575 aa		31.6	■■■□□ 2.65
U2AF1-208	ENST00000471250	SSFA2	P28290	1259 aa		31.6	■■■□□ 2.65
U2AF1-208	ENST00000471250	TIMM10	P62072	90 aa		31.6	■■■□□ 2.65
U2AF1-208	ENST00000471250	NEUROD6	Q96NK8	337 aa		31.6	■■■□□ 2.65
U2AF1-208	ENST00000471250	USP26	Q9BXU7	913 aa		31.6	■■■□□ 2.65
U2AF1-208	ENST00000471250	CNNM1	Q9NRU3	951 aa		31.6	■■■□□ 2.65
U2AF1-208	ENST00000471250		A0A1B0GUL7	405 aa		31.59	■■■□□ 2.65
U2AF1-208	ENST00000471250	SF3B3	Q15393	1217 aa	Known RBP	31.57	■■■□□ 2.65
U2AF1-208	ENST00000471250	METTL24	Q5JXM2	366 aa		31.57	■■■□□ 2.65
U2AF1-208	ENST00000471250	NBPF5P	Q86XG9	351 aa	Predicted RBP	31.57	■■■□□ 2.64
U2AF1-208	ENST00000471250	TNS1	Q9HBL0	1735 aa	Known RBP	31.56	■■■□□ 2.64
U2AF1-208	ENST00000471250	CASZ1	Q86V15	1759 aa		31.56	■■■□□ 2.64
U2AF1-208	ENST00000471250	GTF2E1	P29083	439 aa	Predicted RBP	31.56	■■■□□ 2.64
U2AF1-208	ENST00000471250	SEC31B	Q9NQW1	1179 aa		31.56	■■■□□ 2.64
U2AF1-208	ENST00000471250	TPTE2	Q6XPS3	522 aa		31.55	■■■□□ 2.64
U2AF1-208	ENST00000471250	VGLL2	Q8N8G2	317 aa		31.54	■■■□□ 2.64
U2AF1-208	ENST00000471250	ABCC12	Q96J65	1359 aa		31.54	■■■□□ 2.64
U2AF1-208	ENST00000471250	HAUS7	Q99871	368 aa		31.54	■■■□□ 2.64
U2AF1-208	ENST00000471250	MROH5	Q6ZUA9	1318 aa		31.53	■■■□□ 2.64
U2AF1-208	ENST00000471250	NFIX	Q14938	502 aa		31.52	■■■□□ 2.64
U2AF1-208	ENST00000471250	RGPD3	A6NKT7	1758 aa	Predicted RBP	31.52	■■■□□ 2.64
U2AF1-208	ENST00000471250	RGPD4	Q7Z3J3	1758 aa		31.52	■■■□□ 2.64
U2AF1-208	ENST00000471250	CARMIL3	Q8ND23	1372 aa		31.52	■■■□□ 2.64
U2AF1-208	ENST00000471250	IGHMBP2	P38935	993 aa	Known RBP	31.51	■■■□□ 2.64
U2AF1-208	ENST00000471250	ATP2B3	Q16720	1220 aa		31.51	■■■□□ 2.64
U2AF1-208	ENST00000471250	C3orf67	Q6ZVT6	689 aa		31.51	■■■□□ 2.64
U2AF1-208	ENST00000471250	MPHOSPH8	Q99549	860 aa		31.51	■■■□□ 2.64
U2AF1-208	ENST00000471250	PDE8B	O95263	885 aa		31.51	■■■□□ 2.63
U2AF1-208	ENST00000471250	GYS1	P13807	737 aa		31.51	■■■□□ 2.63
U2AF1-208	ENST00000471250	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	31.51	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms