RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 L3MBTL3Q96JM7 780 aaPredicted RBP11.4□□□□□ -0.58
PTPRE-207ENST00000471218 PHAXQ9H814 394 aaKnown RBP11.4□□□□□ -0.58
PTPRE-207ENST00000471218 PRDM10Q9NQV6 1147 aa11.4□□□□□ -0.58
PTPRE-207ENST00000471218 DLEC1Q9Y238 1755 aa11.39□□□□□ -0.59
PTPRE-207ENST00000471218 CAMTA2O94983 1202 aa11.39□□□□□ -0.59
PTPRE-207ENST00000471218 UBTFL1P0CB47 393 aaPredicted RBP11.39□□□□□ -0.59
PTPRE-207ENST00000471218 MTX1Q13505 466 aa11.39□□□□□ -0.59
PTPRE-207ENST00000471218 CC2D2BQ6DHV5 1058 aa11.39□□□□□ -0.59
PTPRE-207ENST00000471218 CEP85Q6P2H3 762 aa11.39□□□□□ -0.59
PTPRE-207ENST00000471218 USP16Q9Y5T5 823 aa11.39□□□□□ -0.59
PTPRE-207ENST00000471218 F6X3S4 739 aa11.38□□□□□ -0.59
PTPRE-207ENST00000471218 CAPN15O75808 1086 aa11.38□□□□□ -0.59
PTPRE-207ENST00000471218 DDNO94850 711 aaPredicted RBP11.38□□□□□ -0.59
PTPRE-207ENST00000471218 GTF2E1P29083 439 aaPredicted RBP11.38□□□□□ -0.59
PTPRE-207ENST00000471218 NUCB1Q02818 461 aa11.38□□□□□ -0.59
PTPRE-207ENST00000471218 TRIM28Q13263 835 aaKnown RBP11.38□□□□□ -0.59
PTPRE-207ENST00000471218 PROSER3Q2NL68 480 aa11.38□□□□□ -0.59
PTPRE-207ENST00000471218 ANKRD13DQ6ZTN6 518 aa11.38□□□□□ -0.59
PTPRE-207ENST00000471218 NECTIN2Q92692 538 aa11.38□□□□□ -0.59
PTPRE-207ENST00000471218 MEIS3Q99687 375 aa11.38□□□□□ -0.59
PTPRE-207ENST00000471218 METTL22Q9BUU2 404 aaPredicted RBP11.38□□□□□ -0.59
PTPRE-207ENST00000471218 USP44Q9H0E7 712 aa11.38□□□□□ -0.59
PTPRE-207ENST00000471218 DCTPP1Q9H773 170 aa11.38□□□□□ -0.59
PTPRE-207ENST00000471218 MAP3K2Q9Y2U5 619 aa11.38□□□□□ -0.59
PTPRE-207ENST00000471218 KLRG2A4D1S0 409 aaPredicted RBP11.37□□□□□ -0.59
PTPRE-207ENST00000471218 TMEM88BA6NKF7 163 aa11.37□□□□□ -0.59
PTPRE-207ENST00000471218 EIF5BO60841 1220 aaKnown RBP11.37□□□□□ -0.59
PTPRE-207ENST00000471218 A1BGP04217 495 aa11.37□□□□□ -0.59
PTPRE-207ENST00000471218 CTCFP49711 727 aaPredicted RBP11.37□□□□□ -0.59
PTPRE-207ENST00000471218 FKBP4Q02790 459 aaKnown RBP eCLIP11.37□□□□□ -0.59
PTPRE-207ENST00000471218 COPS6Q7L5N1 327 aa11.37□□□□□ -0.59
PTPRE-207ENST00000471218 RIC3Q7Z5B4 369 aa11.37□□□□□ -0.59
PTPRE-207ENST00000471218 XAGE3Q8WTP9 111 aa11.37□□□□□ -0.59
PTPRE-207ENST00000471218 JDP2Q8WYK2 163 aa11.37□□□□□ -0.59
PTPRE-207ENST00000471218 NYXQ9GZU5 481 aa11.37□□□□□ -0.59
PTPRE-207ENST00000471218 TMX4Q9H1E5 349 aaPredicted RBP11.37□□□□□ -0.59
PTPRE-207ENST00000471218 ZNF219Q9P2Y4 722 aaPredicted RBP11.37□□□□□ -0.59
PTPRE-207ENST00000471218 HACL1Q9UJ83 578 aa11.37□□□□□ -0.59
PTPRE-207ENST00000471218 PRAMEF22A3QJZ6 481 aa11.36□□□□□ -0.59
PTPRE-207ENST00000471218 HSP90AB4PQ58FF6 505 aa11.36□□□□□ -0.59
PTPRE-207ENST00000471218 HSP90AB3PQ58FF7 597 aa11.36□□□□□ -0.59
PTPRE-207ENST00000471218 SIRT2Q8IXJ6 389 aa11.36□□□□□ -0.59
PTPRE-207ENST00000471218 C7orf43Q8WVR3 580 aa11.36□□□□□ -0.59
PTPRE-207ENST00000471218 TAF1DQ9H5J8 278 aaPredicted RBP11.36□□□□□ -0.59
PTPRE-207ENST00000471218 DICER1Q9UPY3 1922 aaKnown RBP11.36□□□□□ -0.59
PTPRE-207ENST00000471218 CCDC88AQ3V6T2 1871 aa11.36□□□□□ -0.59
PTPRE-207ENST00000471218 NBPF26B4DH59 902 aa11.35□□□□□ -0.59
PTPRE-207ENST00000471218 ERVV-1B6SEH8 477 aa11.35□□□□□ -0.59
PTPRE-207ENST00000471218 GRM8O00222 908 aa11.35□□□□□ -0.59
PTPRE-207ENST00000471218 ATP8B2P98198 1209 aa11.35□□□□□ -0.59
PTPRE-207ENST00000471218 MAP2K1Q02750 393 aaPredicted RBP11.35□□□□□ -0.59
PTPRE-207ENST00000471218 NBPF10Q6P3W6 841 aaKnown RBP11.35□□□□□ -0.59
PTPRE-207ENST00000471218 GPC2Q8N158 579 aa11.35□□□□□ -0.59
PTPRE-207ENST00000471218 NBPF15Q8N660 670 aa11.35□□□□□ -0.59
PTPRE-207ENST00000471218 CCDC191Q8NCU4 936 aa11.35□□□□□ -0.59
PTPRE-207ENST00000471218 SSH3Q8TE77 659 aa11.35□□□□□ -0.59
PTPRE-207ENST00000471218 MKRN1Q9UHC7 482 aaKnown RBP11.35□□□□□ -0.59
PTPRE-207ENST00000471218 NIP7Q9Y221 180 aaKnown RBP eCLIP11.35□□□□□ -0.59
PTPRE-207ENST00000471218 CLEC11AQ9Y240 323 aa11.35□□□□□ -0.59
PTPRE-207ENST00000471218 CNTNAP1P78357 1384 aa11.35□□□□□ -0.59
PTPRE-207ENST00000471218 PASKQ96RG2 1323 aa11.35□□□□□ -0.59
PTPRE-207ENST00000471218 FER1L6Q2WGJ9 1857 aa11.34□□□□□ -0.59
PTPRE-207ENST00000471218 NEURL1BA8MQ27 555 aa11.34□□□□□ -0.59
PTPRE-207ENST00000471218 KIF6Q6ZMV9 814 aa11.34□□□□□ -0.59
PTPRE-207ENST00000471218 CHD1LQ86WJ1 897 aa11.34□□□□□ -0.59
PTPRE-207ENST00000471218 C9orf78Q9NZ63 289 aaPredicted RBP11.34□□□□□ -0.59
PTPRE-207ENST00000471218 ZBTB47Q9UFB7 747 aaPredicted RBP11.34□□□□□ -0.59
PTPRE-207ENST00000471218 TIAM2Q8IVF5 1701 aa11.34□□□□□ -0.59
PTPRE-207ENST00000471218 SCN4AP35499 1836 aa11.33□□□□□ -0.6
PTPRE-207ENST00000471218 RAB11FIP3O75154 756 aa11.33□□□□□ -0.6
PTPRE-207ENST00000471218 ANXA1P04083 346 aa11.33□□□□□ -0.6
PTPRE-207ENST00000471218 MYL6BP14649 208 aa11.33□□□□□ -0.6
PTPRE-207ENST00000471218 LMOD1P29536 600 aaPredicted RBP11.33□□□□□ -0.6
PTPRE-207ENST00000471218 EPHX2P34913 555 aa11.33□□□□□ -0.6
PTPRE-207ENST00000471218 EIF6P56537 245 aaKnown RBP11.33□□□□□ -0.6
PTPRE-207ENST00000471218 POLA2Q14181 598 aa11.33□□□□□ -0.6
PTPRE-207ENST00000471218 GCKRQ14397 625 aa11.33□□□□□ -0.6
PTPRE-207ENST00000471218 DEFB115Q30KQ5 88 aa11.33□□□□□ -0.6
PTPRE-207ENST00000471218 EAPPQ56P03 285 aaPredicted RBP11.33□□□□□ -0.6
PTPRE-207ENST00000471218 PSMD1Q99460 953 aa11.33□□□□□ -0.6
PTPRE-207ENST00000471218 BEGAINQ9BUH8 593 aa11.33□□□□□ -0.6
PTPRE-207ENST00000471218 VPS33BQ9H267 617 aa11.33□□□□□ -0.6
PTPRE-207ENST00000471218 MAP3K15Q6ZN16 1313 aa11.33□□□□□ -0.6
PTPRE-207ENST00000471218 FZD9O00144 591 aa11.32□□□□□ -0.6
PTPRE-207ENST00000471218 ITGBL1O95965 494 aaPredicted RBP11.32□□□□□ -0.6
PTPRE-207ENST00000471218 IGKV5-2P06315 115 aa11.32□□□□□ -0.6
PTPRE-207ENST00000471218 HSP90B1P14625 803 aaKnown RBP11.32□□□□□ -0.6
PTPRE-207ENST00000471218 IARSP41252 1262 aaKnown RBP11.32□□□□□ -0.6
PTPRE-207ENST00000471218 ECE1P42892 770 aa11.32□□□□□ -0.6
PTPRE-207ENST00000471218 ERC1Q8IUD2 1116 aa11.32□□□□□ -0.6
PTPRE-207ENST00000471218 CNTROBQ8N137 903 aa11.32□□□□□ -0.6
PTPRE-207ENST00000471218 CCDC24Q8N4L8 307 aa11.32□□□□□ -0.6
PTPRE-207ENST00000471218 LRRFIP2Q9Y608 721 aaKnown RBP11.32□□□□□ -0.6
PTPRE-207ENST00000471218 SCN7AQ01118 1682 aa11.31□□□□□ -0.6
PTPRE-207ENST00000471218 RASSF10A6NK89 507 aa11.31□□□□□ -0.6
PTPRE-207ENST00000471218 FAM161AQ3B820 660 aa11.31□□□□□ -0.6
PTPRE-207ENST00000471218 RABL6Q3YEC7 729 aaPredicted RBP11.31□□□□□ -0.6
PTPRE-207ENST00000471218 SYNE4Q8N205 404 aa11.31□□□□□ -0.6
PTPRE-207ENST00000471218 ISCA1Q9BUE6 129 aa11.31□□□□□ -0.6
PTPRE-207ENST00000471218 C1orf115Q9H7X2 142 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms