RNA–Protein interactions for RNA: ENST00000470953.1

VARS-222, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 392 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-222ENST00000470953 WASHC2AQ641Q2 1341 aa8.14□□□□□ -1.11
VARS-222ENST00000470953 POTEB2H3BUK9 544 aa8.14□□□□□ -1.11
VARS-222ENST00000470953 EGFRP00533 1210 aa8.14□□□□□ -1.11
VARS-222ENST00000470953 CANXP27824 592 aaKnown RBP8.14□□□□□ -1.11
VARS-222ENST00000470953 ST5P78524 1137 aa8.14□□□□□ -1.11
VARS-222ENST00000470953 SLC39A6Q13433 755 aa8.14□□□□□ -1.11
VARS-222ENST00000470953 ZNF530Q6P9A1 599 aaPredicted RBP8.14□□□□□ -1.11
VARS-222ENST00000470953 SAMD7Q7Z3H4 446 aa8.14□□□□□ -1.11
VARS-222ENST00000470953 SH3TC2Q8TF17 1288 aa8.14□□□□□ -1.11
VARS-222ENST00000470953 CNKSR2Q8WXI2 1034 aa8.14□□□□□ -1.11
VARS-222ENST00000470953 CDCA5Q96FF9 252 aa8.14□□□□□ -1.11
VARS-222ENST00000470953 PUS7Q96PZ0 661 aaKnown RBP8.14□□□□□ -1.11
VARS-222ENST00000470953 SIN3AQ96ST3 1273 aa8.14□□□□□ -1.11
VARS-222ENST00000470953 BCL2L13Q9BXK5 485 aa8.14□□□□□ -1.11
VARS-222ENST00000470953 ST20-MTHFSA0A0A6YYL1 179 aa8.13□□□□□ -1.11
VARS-222ENST00000470953 NPHP1O15259 732 aa8.13□□□□□ -1.11
VARS-222ENST00000470953 EVI5O60447 810 aa8.13□□□□□ -1.11
VARS-222ENST00000470953 ECM2O94769 699 aaPredicted RBP8.13□□□□□ -1.11
VARS-222ENST00000470953 HSP90AB1P08238 724 aaKnown RBP8.13□□□□□ -1.11
VARS-222ENST00000470953 MTHFSP49914 203 aa8.13□□□□□ -1.11
VARS-222ENST00000470953 SREBF2Q12772 1141 aa8.13□□□□□ -1.11
VARS-222ENST00000470953 EIF4A2Q14240 407 aaKnown RBP8.13□□□□□ -1.11
VARS-222ENST00000470953 TDHQ8IZJ6 230 aa8.13□□□□□ -1.11
VARS-222ENST00000470953 COL26A1Q96A83 441 aa8.13□□□□□ -1.11
VARS-222ENST00000470953 TESK2Q96S53 571 aa8.13□□□□□ -1.11
VARS-222ENST00000470953 CDX2Q99626 313 aaPredicted RBP8.13□□□□□ -1.11
VARS-222ENST00000470953 CNOT7Q9UIV1 285 aaKnown RBP8.13□□□□□ -1.11
VARS-222ENST00000470953 CDHR2Q9BYE9 1310 aa8.12□□□□□ -1.11
VARS-222ENST00000470953 ALPK3Q96L96 1907 aa8.12□□□□□ -1.11
VARS-222ENST00000470953 EIF5P55010 431 aaKnown RBP8.12□□□□□ -1.11
VARS-222ENST00000470953 TBC1D10BQ4KMP7 808 aaPredicted RBP8.12□□□□□ -1.11
VARS-222ENST00000470953 FAM109BQ6ICB4 259 aaPredicted RBP8.12□□□□□ -1.11
VARS-222ENST00000470953 LRFN3Q9BTN0 628 aa8.12□□□□□ -1.11
VARS-222ENST00000470953 CARD11Q9BXL7 1154 aa8.12□□□□□ -1.11
VARS-222ENST00000470953 TBC1D2BQ9UPU7 963 aa8.12□□□□□ -1.11
VARS-222ENST00000470953 UBE2Q2LH0YL09 131 aa8.11□□□□□ -1.11
VARS-222ENST00000470953 MTFR1Q15390 333 aa8.11□□□□□ -1.11
VARS-222ENST00000470953 AOC3Q16853 763 aa8.11□□□□□ -1.11
VARS-222ENST00000470953 PLEKHO1Q53GL0 409 aaPredicted RBP8.11□□□□□ -1.11
VARS-222ENST00000470953 MICALL2Q8IY33 904 aa8.11□□□□□ -1.11
VARS-222ENST00000470953 DCPSQ96C86 337 aaKnown RBP8.11□□□□□ -1.11
VARS-222ENST00000470953 C1QTNF1Q9BXJ1 281 aa8.11□□□□□ -1.11
VARS-222ENST00000470953 BAHCC1Q9P281 2608 aa8.1□□□□□ -1.11
VARS-222ENST00000470953 H7C1D1 291 aa8.1□□□□□ -1.11
VARS-222ENST00000470953 PPIP5K2O43314 1243 aa8.1□□□□□ -1.11
VARS-222ENST00000470953 RAD17O75943 681 aa8.1□□□□□ -1.11
VARS-222ENST00000470953 AEBP1Q8IUX7 1158 aa8.1□□□□□ -1.11
VARS-222ENST00000470953 MYLIPQ8WY64 445 aa8.1□□□□□ -1.11
VARS-222ENST00000470953 CARD14Q9BXL6 1004 aa8.1□□□□□ -1.11
VARS-222ENST00000470953 LGR6Q9HBX8 967 aa8.1□□□□□ -1.11
VARS-222ENST00000470953 POLKQ9UBT6 870 aa8.1□□□□□ -1.11
VARS-222ENST00000470953 ZMYND8Q9ULU4 1186 aaPredicted RBP8.1□□□□□ -1.11
VARS-222ENST00000470953 ZFHX4Q86UP3 3567 aa8.1□□□□□ -1.11
VARS-222ENST00000470953 ZNF646O15015 1829 aaPredicted RBP8.1□□□□□ -1.11
VARS-222ENST00000470953 NCOR1O75376 2440 aa8.1□□□□□ -1.11
VARS-222ENST00000470953 ASTN2O75129 1339 aaPredicted RBP8.09□□□□□ -1.11
VARS-222ENST00000470953 KIF20BQ96Q89 1820 aa8.09□□□□□ -1.11
VARS-222ENST00000470953 KLRG2A4D1S0 409 aaPredicted RBP8.09□□□□□ -1.11
VARS-222ENST00000470953 ALDH1A1P00352 501 aa8.09□□□□□ -1.11
VARS-222ENST00000470953 USP38Q8NB14 1042 aa8.09□□□□□ -1.11
VARS-222ENST00000470953 ADAMTS19Q8TE59 1207 aa8.09□□□□□ -1.11
VARS-222ENST00000470953 SETDB2Q96T68 719 aa8.09□□□□□ -1.11
VARS-222ENST00000470953 PCGF6Q9BYE7 350 aa8.09□□□□□ -1.11
VARS-222ENST00000470953 ZNRF3Q9ULT6 936 aa8.09□□□□□ -1.11
VARS-222ENST00000470953 ZNF330Q9Y3S2 320 aaPredicted RBP8.09□□□□□ -1.11
VARS-222ENST00000470953 IGF2BP3O00425 579 aaKnown RBP eCLIP8.08□□□□□ -1.12
VARS-222ENST00000470953 FARP2O94887 1054 aaPredicted RBP8.08□□□□□ -1.12
VARS-222ENST00000470953 MAGEA10P43363 369 aaPredicted RBP8.08□□□□□ -1.12
VARS-222ENST00000470953 FKBP1BP68106 108 aa8.08□□□□□ -1.12
VARS-222ENST00000470953 RBM26Q5T8P6 1007 aaKnown RBP8.08□□□□□ -1.12
VARS-222ENST00000470953 ZNF697Q5TEC3 545 aa8.08□□□□□ -1.12
VARS-222ENST00000470953 SULF1Q8IWU6 871 aa8.08□□□□□ -1.12
VARS-222ENST00000470953 UHRF1Q96T88 793 aaPredicted RBP8.08□□□□□ -1.12
VARS-222ENST00000470953 SLC52A2Q9HAB3 445 aa8.08□□□□□ -1.12
VARS-222ENST00000470953 GGA3Q9NZ52 723 aa8.08□□□□□ -1.12
VARS-222ENST00000470953 ZSWIM8A7E2V4 1837 aa8.08□□□□□ -1.12
VARS-222ENST00000470953 CAMTA2O94983 1202 aa8.07□□□□□ -1.12
VARS-222ENST00000470953 SYN1P17600 705 aa8.07□□□□□ -1.12
VARS-222ENST00000470953 ALDH1B1P30837 517 aa8.07□□□□□ -1.12
VARS-222ENST00000470953 GJA8P48165 433 aa8.07□□□□□ -1.12
VARS-222ENST00000470953 SP3Q02447 781 aa8.07□□□□□ -1.12
VARS-222ENST00000470953 CRHR2Q13324 411 aa8.07□□□□□ -1.12
VARS-222ENST00000470953 C1orf141Q5JVX7 400 aa8.07□□□□□ -1.12
VARS-222ENST00000470953 IFNL1Q8IU54 200 aa8.07□□□□□ -1.12
VARS-222ENST00000470953 COL2A1P02458 1487 aaPredicted RBP8.06□□□□□ -1.12
VARS-222ENST00000470953 SSC5DA1L4H1 1573 aa8.06□□□□□ -1.12
VARS-222ENST00000470953 A0A087WZG4 1122 aa8.06□□□□□ -1.12
VARS-222ENST00000470953 PRAMEF22A3QJZ6 481 aa8.06□□□□□ -1.12
VARS-222ENST00000470953 AMOTQ4VCS5 1084 aa8.06□□□□□ -1.12
VARS-222ENST00000470953 NUTM1Q86Y26 1132 aa8.06□□□□□ -1.12
VARS-222ENST00000470953 NKX2-3Q8TAU0 364 aa8.06□□□□□ -1.12
VARS-222ENST00000470953 UBE2OQ9C0C9 1292 aaKnown RBP8.06□□□□□ -1.12
VARS-222ENST00000470953 TCERG1O14776 1098 aaKnown RBP8.05□□□□□ -1.12
VARS-222ENST00000470953 KRT37O76014 449 aa8.05□□□□□ -1.12
VARS-222ENST00000470953 FOSL2P15408 326 aa8.05□□□□□ -1.12
VARS-222ENST00000470953 TNNT2P45379 298 aaPredicted RBP8.05□□□□□ -1.12
VARS-222ENST00000470953 TNIP1Q15025 636 aa8.05□□□□□ -1.12
VARS-222ENST00000470953 CC2D2BQ6DHV5 1058 aa8.05□□□□□ -1.12
VARS-222ENST00000470953 NBPF5PQ86XG9 351 aaPredicted RBP8.05□□□□□ -1.12
VARS-222ENST00000470953 C7orf61Q8IZ16 206 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms