RNA–Protein interactions for RNA: ENST00000470944.1

SOD1-203, Transcript of superoxide dismutase 1, humanhuman

TSL 2

Gene SOD1, Length 1,746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1-203ENST00000470944 RPAP2Q8IXW5 612 aaPredicted RBP36.06■■■■□ 3.36
SOD1-203ENST00000470944 GREM2Q9H772 168 aa36.06■■■■□ 3.36
SOD1-203ENST00000470944 SPON1Q9HCB6 807 aa36.06■■■■□ 3.36
SOD1-203ENST00000470944 SRGAP3O43295 1099 aa36.05■■■■□ 3.36
SOD1-203ENST00000470944 ANKRD31Q8N7Z5 1873 aa36.05■■■■□ 3.36
SOD1-203ENST00000470944 SF3B3Q15393 1217 aaKnown RBP36.05■■■■□ 3.36
SOD1-203ENST00000470944 GTF3C3Q9Y5Q9 886 aa36.05■■■■□ 3.36
SOD1-203ENST00000470944 C10orf71Q711Q0 1435 aa36.04■■■■□ 3.36
SOD1-203ENST00000470944 SRCAPQ6ZRS2 3230 aa36.02■■■■□ 3.36
SOD1-203ENST00000470944 MYH3P11055 1940 aa36.02■■■■□ 3.36
SOD1-203ENST00000470944 KLRG2A4D1S0 409 aaPredicted RBP36.02■■■■□ 3.36
SOD1-203ENST00000470944 CRY2Q49AN0 593 aa36.01■■■■□ 3.36
SOD1-203ENST00000470944 CCDC152Q4G0S7 254 aa36.01■■■■□ 3.36
SOD1-203ENST00000470944 POLA2Q14181 598 aa36■■■■□ 3.35
SOD1-203ENST00000470944 SSH3Q8TE77 659 aa36■■■■□ 3.35
SOD1-203ENST00000470944 SEC31BQ9NQW1 1179 aa36■■■■□ 3.35
SOD1-203ENST00000470944 RFX5P48382 616 aaPredicted RBP36■■■■□ 3.35
SOD1-203ENST00000470944 KLHDC4Q8TBB5 520 aa36■■■■□ 3.35
SOD1-203ENST00000470944 ITGA6P23229 1130 aa35.99■■■■□ 3.35
SOD1-203ENST00000470944 IGHDP01880 384 aa35.98■■■■□ 3.35
SOD1-203ENST00000470944 PDE6BP35913 854 aa35.98■■■■□ 3.35
SOD1-203ENST00000470944 COL4A1P02462 1669 aa35.97■■■■□ 3.35
SOD1-203ENST00000470944 IFIT5Q13325 482 aaKnown RBP35.97■■■■□ 3.35
SOD1-203ENST00000470944 CCDC57Q2TAC2 916 aa35.97■■■■□ 3.35
SOD1-203ENST00000470944 ZNF594Q96JF6 807 aaPredicted RBP35.97■■■■□ 3.35
SOD1-203ENST00000470944 PA2G4Q9UQ80 394 aaKnown RBP35.97■■■■□ 3.35
SOD1-203ENST00000470944 RTL9Q8NET4 1388 aa35.96■■■■□ 3.35
SOD1-203ENST00000470944 HDAC1Q13547 482 aaPredicted RBP35.95■■■■□ 3.35
SOD1-203ENST00000470944 PPP4R2Q9NY27 417 aa35.95■■■■□ 3.35
SOD1-203ENST00000470944 SRGNP10124 158 aa35.94■■■■□ 3.34
SOD1-203ENST00000470944 CHRNA5P30532 468 aa35.94■■■■□ 3.34
SOD1-203ENST00000470944 HMMRO75330 724 aa35.94■■■■□ 3.34
SOD1-203ENST00000470944 COL11A2P13942 1736 aaPredicted RBP35.94■■■■□ 3.34
SOD1-203ENST00000470944 PTPN12Q05209 780 aaKnown RBP35.94■■■■□ 3.34
SOD1-203ENST00000470944 C2CD5Q86YS7 1000 aa35.94■■■■□ 3.34
SOD1-203ENST00000470944 RPGRQ92834 1020 aaKnown RBP35.94■■■■□ 3.34
SOD1-203ENST00000470944 PPP1R1BQ9UD71 204 aaPredicted RBP35.94■■■■□ 3.34
SOD1-203ENST00000470944 ANKRD18BA2A2Z9 1011 aa35.93■■■■□ 3.34
SOD1-203ENST00000470944 B4GALNT3Q6L9W6 998 aa35.93■■■■□ 3.34
SOD1-203ENST00000470944 KLHL34Q8N239 644 aa35.91■■■■□ 3.34
SOD1-203ENST00000470944 CELF1Q92879 486 aaKnown RBP35.91■■■■□ 3.34
SOD1-203ENST00000470944 KIF13BQ9NQT8 1826 aa35.91■■■■□ 3.34
SOD1-203ENST00000470944 HOXA10P31260 410 aaPredicted RBP35.91■■■■□ 3.34
SOD1-203ENST00000470944 DDX46Q7L014 1031 aaKnown RBP35.91■■■■□ 3.34
SOD1-203ENST00000470944 CCDC136Q96JN2 1154 aa35.91■■■■□ 3.34
SOD1-203ENST00000470944 RWDD1Q9H446 243 aaPredicted RBP35.9■■■■□ 3.34
SOD1-203ENST00000470944 H0YIN7 160 aa35.89■■■■□ 3.34
SOD1-203ENST00000470944 SIL1Q9H173 461 aa35.89■■■■□ 3.34
SOD1-203ENST00000470944 COPRSQ9NQ92 184 aa35.89■■■■□ 3.34
SOD1-203ENST00000470944 TAF1P21675 1872 aa35.89■■■■□ 3.34
SOD1-203ENST00000470944 NPR1P16066 1061 aa35.88■■■■□ 3.33
SOD1-203ENST00000470944 TAF7LQ5H9L4 462 aa35.88■■■■□ 3.33
SOD1-203ENST00000470944 RBM17Q96I25 401 aaKnown RBP35.88■■■■□ 3.33
SOD1-203ENST00000470944 EXOC6BQ9Y2D4 811 aa35.88■■■■□ 3.33
SOD1-203ENST00000470944 A0A0G2JLW4 131 aa35.87■■■■□ 3.33
SOD1-203ENST00000470944 SURF6O75683 361 aaKnown RBP35.87■■■■□ 3.33
SOD1-203ENST00000470944 MASTLQ96GX5 879 aa35.87■■■■□ 3.33
SOD1-203ENST00000470944 PUS3Q9BZE2 481 aaKnown RBP35.87■■■■□ 3.33
SOD1-203ENST00000470944 CD2APQ9Y5K6 639 aa35.87■■■■□ 3.33
SOD1-203ENST00000470944 DPEP1P16444 411 aa35.86■■■■□ 3.33
SOD1-203ENST00000470944 ZNF622Q969S3 477 aaKnown RBP eCLIP35.86■■■■□ 3.333e-13■□□□□ 10.8
SOD1-203ENST00000470944 CDC5LQ99459 802 aaKnown RBP35.86■■■■□ 3.33
SOD1-203ENST00000470944 DCTPP1Q9H773 170 aa35.86■■■■□ 3.33
SOD1-203ENST00000470944 KCNA3P22001 575 aa35.85■■■■□ 3.33
SOD1-203ENST00000470944 GRAPQ13588 217 aa35.85■■■■□ 3.33
SOD1-203ENST00000470944 LRRC24Q50LG9 513 aa35.85■■■■□ 3.33
SOD1-203ENST00000470944 SLC51AQ86UW1 340 aa35.85■■■■□ 3.33
SOD1-203ENST00000470944 GRAPLQ8TC17 118 aaPredicted RBP35.85■■■■□ 3.33
SOD1-203ENST00000470944 CRAMP1Q96RY5 1269 aa35.85■■■■□ 3.33
SOD1-203ENST00000470944 ANKRD18AQ8IVF6 992 aa35.84■■■■□ 3.33
SOD1-203ENST00000470944 NOP58Q9Y2X3 529 aaKnown RBP35.84■■■■□ 3.33
SOD1-203ENST00000470944 GOLGB1Q14789 3259 aaKnown RBP35.84■■■■□ 3.33
SOD1-203ENST00000470944 TGFB2P61812 414 aa35.83■■■■□ 3.33
SOD1-203ENST00000470944 RPS8P62241 208 aaKnown RBP35.83■■■■□ 3.33
SOD1-203ENST00000470944 PDZRN3Q9UPQ7 1066 aa35.83■■■■□ 3.33
SOD1-203ENST00000470944 KIAA1551Q9HCM1 1747 aa35.83■■■■□ 3.33
SOD1-203ENST00000470944 LDHAL6AQ6ZMR3 332 aa35.83■■■■□ 3.33
SOD1-203ENST00000470944 LRP5O75197 1615 aa35.82■■■■□ 3.33
SOD1-203ENST00000470944 STYK1Q6J9G0 422 aa35.82■■■■□ 3.32
SOD1-203ENST00000470944 ATG9AQ7Z3C6 839 aa35.82■■■■□ 3.32
SOD1-203ENST00000470944 KDM2BQ8NHM5 1336 aa35.82■■■■□ 3.32
SOD1-203ENST00000470944 IGHMBP2P38935 993 aaKnown RBP35.81■■■■□ 3.32
SOD1-203ENST00000470944 FHDC1Q9C0D6 1143 aaPredicted RBP35.81■■■■□ 3.32
SOD1-203ENST00000470944 EYA2O00167 538 aa35.8■■■■□ 3.32
SOD1-203ENST00000470944 NLGN2Q8NFZ4 835 aa35.8■■■■□ 3.32
SOD1-203ENST00000470944 MPHOSPH8Q99549 860 aa35.8■■■■□ 3.32
SOD1-203ENST00000470944 APBB1O00213 710 aa35.8■■■■□ 3.32
SOD1-203ENST00000470944 CNNM1Q9NRU3 951 aa35.79■■■■□ 3.32
SOD1-203ENST00000470944 RIPOR2Q9Y4F9 1068 aa35.79■■■■□ 3.32
SOD1-203ENST00000470944 ALDH1B1P30837 517 aa35.78■■■■□ 3.32
SOD1-203ENST00000470944 G3BP1Q13283 466 aaKnown RBP eCLIP35.78■■■■□ 3.324e-7■■■□□ 19.1
SOD1-203ENST00000470944 SMC5Q8IY18 1101 aa35.78■■■■□ 3.32
SOD1-203ENST00000470944 BSDC1Q9NW68 430 aaPredicted RBP35.78■■■■□ 3.32
SOD1-203ENST00000470944 SPEF2Q9C093 1822 aa35.77■■■■□ 3.32
SOD1-203ENST00000470944 CIAO1O76071 339 aa35.77■■■■□ 3.32
SOD1-203ENST00000470944 OS9Q13438 667 aaPredicted RBP35.77■■■■□ 3.32
SOD1-203ENST00000470944 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP35.77■■■■□ 3.32
SOD1-203ENST00000470944 DLEC1Q9Y238 1755 aa35.76■■■■□ 3.32
SOD1-203ENST00000470944 SASH1O94885 1247 aa35.76■■■■□ 3.31
SOD1-203ENST00000470944 WWC3Q9ULE0 1092 aa35.76■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 227.1 ms