RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 CCDC94Q9BW85 323 aaPredicted RBP12.21□□□□□ -0.45
RRP1B-202ENST00000470886 TRIM34Q9BYJ4 488 aa12.21□□□□□ -0.45
RRP1B-202ENST00000470886 GTPBP4Q9BZE4 634 aaKnown RBP12.21□□□□□ -0.45
RRP1B-202ENST00000470886 IBTKQ9P2D0 1353 aaPredicted RBP12.21□□□□□ -0.45
RRP1B-202ENST00000470886 TDO2P48775 406 aa12.21□□□□□ -0.45
RRP1B-202ENST00000470886 TUBB4BP68371 445 aa12.21□□□□□ -0.45
RRP1B-202ENST00000470886 SYTL4Q96C24 671 aaPredicted RBP12.21□□□□□ -0.45
RRP1B-202ENST00000470886 MPHOSPH8Q99549 860 aa12.21□□□□□ -0.45
RRP1B-202ENST00000470886 ANTXR1Q9H6X2 564 aa12.21□□□□□ -0.45
RRP1B-202ENST00000470886 FSD2A1L4K1 749 aa12.21□□□□□ -0.46
RRP1B-202ENST00000470886 USP8P40818 1118 aa12.21□□□□□ -0.46
RRP1B-202ENST00000470886 RNF41Q9H4P4 317 aaPredicted RBP12.21□□□□□ -0.46
RRP1B-202ENST00000470886 KIF20BQ96Q89 1820 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 AK2P54819 239 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 TYRO3Q06418 890 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 ANO6Q4KMQ2 910 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 AKAP4Q5JQC9 854 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 TTLL5Q6EMB2 1281 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 LINS1Q8NG48 757 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 FEZ1Q99689 392 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 LMBRD1Q9NUN5 540 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 CDC42BPGQ6DT37 1551 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 URI1O94763 535 aaPredicted RBP12.2□□□□□ -0.46
RRP1B-202ENST00000470886 AXDND1Q5T1B0 1012 aaPredicted RBP12.2□□□□□ -0.46
RRP1B-202ENST00000470886 RBSNQ9H1K0 784 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 USP19O94966 1318 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 H0YHG0 523 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 STARD3NLO95772 234 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 TSHZ3Q63HK5 1081 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 KRT222Q8N1A0 295 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 ANKRD24Q8TF21 1146 aa12.2□□□□□ -0.46
RRP1B-202ENST00000470886 CCDC181Q5TID7 509 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 JAKMIP3Q5VZ66 844 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 RUFY3Q7L099 469 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 MRPS27Q92552 414 aaKnown RBP12.19□□□□□ -0.46
RRP1B-202ENST00000470886 A0A087WZG4 1122 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 GOLGA8BA8MQT2 603 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 GRM8O00222 908 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 DNM1Q05193 864 aaKnown RBP12.19□□□□□ -0.46
RRP1B-202ENST00000470886 MTHFSDQ2M296 383 aaKnown RBP12.19□□□□□ -0.46
RRP1B-202ENST00000470886 METTL24Q5JXM2 366 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 MPRIPQ6WCQ1 1025 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 CCDC186Q7Z3E2 898 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 CNNM3Q8NE01 707 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 NCOA7Q8NI08 942 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 DACT1Q9NYF0 836 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 ERLIN2O94905 339 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 MCMDC2Q4G0Z9 681 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 TOM1L2Q6ZVM7 507 aa12.19□□□□□ -0.46
RRP1B-202ENST00000470886 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.19□□□□□ -0.467e-9■□□□□ 8.1
RRP1B-202ENST00000470886 GOLGA6L10A6NI86 522 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 TMC6Q7Z403 805 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 NUP133Q8WUM0 1156 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 SYT1P21579 422 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 SSRP1Q08945 709 aaKnown RBP12.18□□□□□ -0.46
RRP1B-202ENST00000470886 CCDC102BQ68D86 513 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 FAM177A1Q8N128 213 aaPredicted RBP12.18□□□□□ -0.46
RRP1B-202ENST00000470886 ZNF397Q8NF99 534 aaPredicted RBP12.18□□□□□ -0.46
RRP1B-202ENST00000470886 DEF6Q9H4E7 631 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 MAP3K12Q12852 859 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 TEX13AQ9BXU3 409 aaPredicted RBP12.18□□□□□ -0.46
RRP1B-202ENST00000470886 ORC3Q9UBD5 711 aaPredicted RBP12.18□□□□□ -0.46
RRP1B-202ENST00000470886 COL3A1P02461 1466 aaPredicted RBP12.18□□□□□ -0.46
RRP1B-202ENST00000470886 ANKRD26Q9UPS8 1709 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 IDH1O75874 414 aaKnown RBP12.18□□□□□ -0.46
RRP1B-202ENST00000470886 IFNL2Q8IZJ0 200 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 PIBF1Q8WXW3 757 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 FAM107BQ9H098 131 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 USP16Q9Y5T5 823 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 TMEM131LA2VDJ0 1609 aa12.18□□□□□ -0.46
RRP1B-202ENST00000470886 ZNF500O60304 480 aaPredicted RBP12.17□□□□□ -0.46
RRP1B-202ENST00000470886 KIAA0754O94854 1291 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 BMP15O95972 392 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 SNRPA1P09661 255 aaKnown RBP12.17□□□□□ -0.46
RRP1B-202ENST00000470886 SKILP12757 684 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 IFIT5Q13325 482 aaKnown RBP12.17□□□□□ -0.46
RRP1B-202ENST00000470886 NAPBQ9H115 298 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 SHPRHQ149N8 1683 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 BRD1O95696 1058 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 SMAP1Q8IYB5 467 aaPredicted RBP12.17□□□□□ -0.46
RRP1B-202ENST00000470886 CHPF2Q9P2E5 772 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 SLC12A7Q9Y666 1083 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 USP6P35125 1406 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 RDXP35241 583 aaKnown RBP12.17□□□□□ -0.46
RRP1B-202ENST00000470886 SOGA3Q5TF21 947 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 CREB3L3Q68CJ9 461 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 STK11IPQ8N1F8 1099 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 BRF1Q92994 677 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 TM6SF1Q9BZW5 370 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 OSBPL3Q9H4L5 887 aa12.17□□□□□ -0.46
RRP1B-202ENST00000470886 CWC25Q9NXE8 425 aaPredicted RBP12.17□□□□□ -0.46
RRP1B-202ENST00000470886 IARSP41252 1262 aaKnown RBP12.17□□□□□ -0.46
RRP1B-202ENST00000470886 MEX3CQ5U5Q3 659 aaKnown RBP12.17□□□□□ -0.46
RRP1B-202ENST00000470886 CLTCQ00610 1675 aaKnown RBP12.16□□□□□ -0.46
RRP1B-202ENST00000470886 SLU7O95391 586 aaKnown RBP12.16□□□□□ -0.46
RRP1B-202ENST00000470886 USHBP1Q8N6Y0 703 aa12.16□□□□□ -0.46
RRP1B-202ENST00000470886 NECAB1Q8N987 351 aa12.16□□□□□ -0.46
RRP1B-202ENST00000470886 DDX54Q8TDD1 881 aaKnown RBP12.16□□□□□ -0.46
RRP1B-202ENST00000470886 ANKARQ7Z5J8 1434 aa12.16□□□□□ -0.46
RRP1B-202ENST00000470886 MAP3K19Q56UN5 1328 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms