RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 HELQQ8TDG4 1101 aa7.78□□□□□ -1.16
COL9A1-206ENST00000470652 GSX2Q9BZM3 304 aa7.78□□□□□ -1.16
COL9A1-206ENST00000470652 FAM13BQ9NYF5 915 aa7.78□□□□□ -1.16
COL9A1-206ENST00000470652 ALAS2P22557 587 aa7.77□□□□□ -1.17
COL9A1-206ENST00000470652 SCNN1AP37088 669 aa7.77□□□□□ -1.17
COL9A1-206ENST00000470652 GTF3C2Q8WUA4 911 aaPredicted RBP7.77□□□□□ -1.17
COL9A1-206ENST00000470652 PNMA5Q96PV4 448 aa7.77□□□□□ -1.17
COL9A1-206ENST00000470652 RTCBQ9Y3I0 505 aaKnown RBP7.77□□□□□ -1.17
COL9A1-206ENST00000470652 ARID4AP29374 1257 aaPredicted RBP7.76□□□□□ -1.17
COL9A1-206ENST00000470652 RGL4Q8IZJ4 473 aa7.76□□□□□ -1.17
COL9A1-206ENST00000470652 TNFRSF25Q93038 417 aa7.76□□□□□ -1.17
COL9A1-206ENST00000470652 BHMTQ93088 406 aa7.76□□□□□ -1.17
COL9A1-206ENST00000470652 ELOA3CA0A087WX78 387 aaPredicted RBP7.75□□□□□ -1.17
COL9A1-206ENST00000470652 ELOA3DA6NLF2 546 aaPredicted RBP7.75□□□□□ -1.17
COL9A1-206ENST00000470652 ADARB2-AS1A8MUL3 147 aa7.75□□□□□ -1.17
COL9A1-206ENST00000470652 EGFRP00533 1210 aa7.75□□□□□ -1.17
COL9A1-206ENST00000470652 GRNP28799 593 aaKnown RBP7.75□□□□□ -1.17
COL9A1-206ENST00000470652 ELOA3BQ3SY89 546 aa7.75□□□□□ -1.17
COL9A1-206ENST00000470652 FAM26DQ5JW98 314 aa7.75□□□□□ -1.17
COL9A1-206ENST00000470652 RAB44Q7Z6P3 723 aaPredicted RBP7.75□□□□□ -1.17
COL9A1-206ENST00000470652 CMTR1Q8N1G2 835 aaKnown RBP7.75□□□□□ -1.17
COL9A1-206ENST00000470652 ELOA3Q8NG57 546 aa7.75□□□□□ -1.17
COL9A1-206ENST00000470652 PIK3R5Q8WYR1 880 aa7.75□□□□□ -1.17
COL9A1-206ENST00000470652 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.75□□□□□ -1.17
COL9A1-206ENST00000470652 SPDYE3A6NKU9 549 aa7.74□□□□□ -1.17
COL9A1-206ENST00000470652 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
COL9A1-206ENST00000470652 ZAP70P43403 619 aa7.74□□□□□ -1.17
COL9A1-206ENST00000470652 RSPO4Q2I0M5 234 aaPredicted RBP7.74□□□□□ -1.17
COL9A1-206ENST00000470652 PRRT3Q5FWE3 981 aa7.74□□□□□ -1.17
COL9A1-206ENST00000470652 KRTAP9-2Q9BYQ4 174 aa7.74□□□□□ -1.17
COL9A1-206ENST00000470652 SCO2A0A1W2PP80 73 aa7.73□□□□□ -1.17
COL9A1-206ENST00000470652 ZBTB39O15060 712 aa7.73□□□□□ -1.17
COL9A1-206ENST00000470652 XYLBO75191 536 aa7.73□□□□□ -1.17
COL9A1-206ENST00000470652 APBA3O96018 575 aa7.73□□□□□ -1.17
COL9A1-206ENST00000470652 SF3B2Q13435 895 aaKnown RBP7.73□□□□□ -1.17
COL9A1-206ENST00000470652 USP20Q9Y2K6 914 aa7.73□□□□□ -1.17
COL9A1-206ENST00000470652 MAP3K6O95382 1288 aa7.72□□□□□ -1.17
COL9A1-206ENST00000470652 NFKB1P19838 968 aa7.72□□□□□ -1.17
COL9A1-206ENST00000470652 NOM1Q5C9Z4 860 aaKnown RBP7.72□□□□□ -1.17
COL9A1-206ENST00000470652 MDFIQ99750 246 aa7.72□□□□□ -1.17
COL9A1-206ENST00000470652 TPSG1Q9NRR2 321 aa7.72□□□□□ -1.17
COL9A1-206ENST00000470652 FNDC3AQ9Y2H6 1198 aaKnown RBP7.72□□□□□ -1.17
COL9A1-206ENST00000470652 KCNMB2Q9Y691 235 aa7.72□□□□□ -1.17
COL9A1-206ENST00000470652 SASH3O75995 380 aa7.71□□□□□ -1.18
COL9A1-206ENST00000470652 FAM13AO94988 1023 aa7.71□□□□□ -1.18
COL9A1-206ENST00000470652 ABL1P00519 1130 aa7.71□□□□□ -1.18
COL9A1-206ENST00000470652 NPR3P17342 541 aa7.71□□□□□ -1.18
COL9A1-206ENST00000470652 TARSP26639 723 aaKnown RBP7.71□□□□□ -1.18
COL9A1-206ENST00000470652 FKBP4Q02790 459 aaKnown RBP eCLIP7.71□□□□□ -1.18
COL9A1-206ENST00000470652 PCSK7Q16549 785 aa7.71□□□□□ -1.18
COL9A1-206ENST00000470652 NKAPLQ5M9Q1 402 aa7.71□□□□□ -1.18
COL9A1-206ENST00000470652 ALKBH2Q6NS38 261 aa7.71□□□□□ -1.18
COL9A1-206ENST00000470652 GPR152Q8TDT2 470 aa7.71□□□□□ -1.18
COL9A1-206ENST00000470652 UBE2OQ9C0C9 1292 aaKnown RBP7.71□□□□□ -1.18
COL9A1-206ENST00000470652 EGFL7Q9UHF1 273 aa7.71□□□□□ -1.18
COL9A1-206ENST00000470652 KRTAP9-6A0A140TA67 174 aa7.7□□□□□ -1.18
COL9A1-206ENST00000470652 FAM229AH3BQW9 127 aa7.7□□□□□ -1.18
COL9A1-206ENST00000470652 BRD1O95696 1058 aa7.7□□□□□ -1.18
COL9A1-206ENST00000470652 RPLP1P05386 114 aaKnown RBP7.7□□□□□ -1.18
COL9A1-206ENST00000470652 RARAP10276 462 aa7.7□□□□□ -1.18
COL9A1-206ENST00000470652 ADH7P40394 386 aa7.7□□□□□ -1.18
COL9A1-206ENST00000470652 EIF1AXP47813 144 aaKnown RBP7.7□□□□□ -1.18
COL9A1-206ENST00000470652 TRIM28Q13263 835 aaKnown RBP7.7□□□□□ -1.18
COL9A1-206ENST00000470652 MTMR3Q13615 1198 aa7.7□□□□□ -1.18
COL9A1-206ENST00000470652 KRT25Q7Z3Z0 450 aa7.7□□□□□ -1.18
COL9A1-206ENST00000470652 IGFLR1Q9H665 355 aa7.7□□□□□ -1.18
COL9A1-206ENST00000470652 ZFATQ9P243 1243 aa7.7□□□□□ -1.18
COL9A1-206ENST00000470652 UBAP1LF5GYI3 381 aa7.69□□□□□ -1.18
COL9A1-206ENST00000470652 M0R082 166 aa7.69□□□□□ -1.18
COL9A1-206ENST00000470652 PCSK2P16519 638 aa7.69□□□□□ -1.18
COL9A1-206ENST00000470652 MPSTP25325 297 aa7.69□□□□□ -1.18
COL9A1-206ENST00000470652 FOXD4L6Q3SYB3 417 aaPredicted RBP7.69□□□□□ -1.18
COL9A1-206ENST00000470652 FOXD4L3Q6VB84 417 aaPredicted RBP7.69□□□□□ -1.18
COL9A1-206ENST00000470652 DHX32Q7L7V1 743 aaKnown RBP7.69□□□□□ -1.18
COL9A1-206ENST00000470652 TXNDC2Q86VQ3 553 aa7.69□□□□□ -1.18
COL9A1-206ENST00000470652 NLRP13Q86W25 1043 aa7.69□□□□□ -1.18
COL9A1-206ENST00000470652 ATCAYQ86WG3 371 aa7.69□□□□□ -1.18
COL9A1-206ENST00000470652 ZNF417Q8TAU3 575 aa7.69□□□□□ -1.18
COL9A1-206ENST00000470652 CCER1Q8TC90 406 aaPredicted RBP7.69□□□□□ -1.18
COL9A1-206ENST00000470652 ZNF587Q96SQ5 575 aaPredicted RBP7.69□□□□□ -1.18
COL9A1-206ENST00000470652 TBC1D8BQ0IIM8 1120 aa7.68□□□□□ -1.18
COL9A1-206ENST00000470652 NUDT16Q96DE0 195 aaKnown RBP7.68□□□□□ -1.18
COL9A1-206ENST00000470652 DNAJB12Q9NXW2 375 aaKnown RBP7.68□□□□□ -1.18
COL9A1-206ENST00000470652 DYRK3O43781 588 aa7.67□□□□□ -1.18
COL9A1-206ENST00000470652 ICMTO60725 284 aa7.67□□□□□ -1.18
COL9A1-206ENST00000470652 MZF1P28698 734 aaPredicted RBP7.67□□□□□ -1.18
COL9A1-206ENST00000470652 SERPINB4P48594 390 aa7.67□□□□□ -1.18
COL9A1-206ENST00000470652 DNM1Q05193 864 aaKnown RBP7.67□□□□□ -1.18
COL9A1-206ENST00000470652 ZNF211Q13398 564 aaPredicted RBP7.67□□□□□ -1.18
COL9A1-206ENST00000470652 AAMPQ13685 434 aa7.67□□□□□ -1.18
COL9A1-206ENST00000470652 TRIP4Q15650 581 aaPredicted RBP7.67□□□□□ -1.18
COL9A1-206ENST00000470652 GRIK4Q16099 956 aa7.67□□□□□ -1.18
COL9A1-206ENST00000470652 C8orf86Q6ZUL3 223 aa7.67□□□□□ -1.18
COL9A1-206ENST00000470652 TTC16Q8NEE8 873 aa7.67□□□□□ -1.18
COL9A1-206ENST00000470652 TRPM4Q8TD43 1214 aa7.67□□□□□ -1.18
COL9A1-206ENST00000470652 ANO2Q9NQ90 1003 aa7.67□□□□□ -1.18
COL9A1-206ENST00000470652 TLR7Q9NYK1 1049 aaKnown RBP7.67□□□□□ -1.18
COL9A1-206ENST00000470652 SLC6A14Q9UN76 642 aa7.67□□□□□ -1.18
COL9A1-206ENST00000470652 PSAPP07602 524 aa7.66□□□□□ -1.18
COL9A1-206ENST00000470652 COL9A3Q14050 684 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms