RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 ARHGAP4P98171 946 aa10.21□□□□□ -0.77
SSB-209ENST00000470621 HOMEZQ8IX15 550 aa10.21□□□□□ -0.77
SSB-209ENST00000470621 NEDD1Q8NHV4 660 aa10.21□□□□□ -0.77
SSB-209ENST00000470621 CCDC87Q9NVE4 849 aa10.21□□□□□ -0.77
SSB-209ENST00000470621 A6NHS1 94 aa10.2□□□□□ -0.78
SSB-209ENST00000470621 MSTNO14793 375 aa10.2□□□□□ -0.78
SSB-209ENST00000470621 PDGFAP04085 211 aa10.2□□□□□ -0.78
SSB-209ENST00000470621 SLCO4C1Q6ZQN7 724 aa10.2□□□□□ -0.78
SSB-209ENST00000470621 PODNQ7Z5L7 613 aa10.2□□□□□ -0.78
SSB-209ENST00000470621 PIK3R5Q8WYR1 880 aa10.2□□□□□ -0.78
SSB-209ENST00000470621 AVENQ9NQS1 362 aaPredicted RBP10.2□□□□□ -0.78
SSB-209ENST00000470621 LRRC4BQ9NT99 713 aa10.2□□□□□ -0.78
SSB-209ENST00000470621 POLIQ9UNA4 740 aa10.2□□□□□ -0.78
SSB-209ENST00000470621 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.2□□□□□ -0.78
SSB-209ENST00000470621 SHISA8B8ZZ34 492 aa10.19□□□□□ -0.78
SSB-209ENST00000470621 EGFRP00533 1210 aa10.19□□□□□ -0.78
SSB-209ENST00000470621 ADH6P28332 368 aa10.19□□□□□ -0.78
SSB-209ENST00000470621 GOLGA6L1Q8N7Z2 621 aa10.19□□□□□ -0.78
SSB-209ENST00000470621 GDF2Q9UK05 429 aaPredicted RBP10.19□□□□□ -0.78
SSB-209ENST00000470621 UBAP1LF5GYI3 381 aa10.18□□□□□ -0.78
SSB-209ENST00000470621 OIP5O43482 229 aa10.18□□□□□ -0.78
SSB-209ENST00000470621 ITGB2P05107 769 aa10.18□□□□□ -0.78
SSB-209ENST00000470621 AAMPQ13685 434 aa10.18□□□□□ -0.78
SSB-209ENST00000470621 ALKBH2Q6NS38 261 aa10.18□□□□□ -0.78
SSB-209ENST00000470621 PNMA5Q96PV4 448 aa10.18□□□□□ -0.78
SSB-209ENST00000470621 MDFIQ99750 246 aa10.18□□□□□ -0.78
SSB-209ENST00000470621 GGNBP2Q9H3C7 697 aa10.18□□□□□ -0.78
SSB-209ENST00000470621 FAM13BQ9NYF5 915 aa10.18□□□□□ -0.78
SSB-209ENST00000470621 SIN3BO75182 1162 aa10.17□□□□□ -0.78
SSB-209ENST00000470621 RARAP10276 462 aa10.17□□□□□ -0.78
SSB-209ENST00000470621 MZF1P28698 734 aaPredicted RBP10.17□□□□□ -0.78
SSB-209ENST00000470621 GALNT6Q8NCL4 622 aa10.17□□□□□ -0.78
SSB-209ENST00000470621 SPOCK3Q9BQ16 436 aa10.17□□□□□ -0.78
SSB-209ENST00000470621 EPXP11678 715 aa10.16□□□□□ -0.78
SSB-209ENST00000470621 TBC1D8BQ0IIM8 1120 aa10.16□□□□□ -0.78
SSB-209ENST00000470621 EDARADDQ8WWZ3 215 aa10.16□□□□□ -0.78
SSB-209ENST00000470621 TNFRSF25Q93038 417 aa10.16□□□□□ -0.78
SSB-209ENST00000470621 ADAM23O75077 832 aa10.15□□□□□ -0.78
SSB-209ENST00000470621 NEUROD1Q13562 356 aa10.15□□□□□ -0.78
SSB-209ENST00000470621 IGFLR1Q9H665 355 aa10.15□□□□□ -0.78
SSB-209ENST00000470621 C11orf16Q9NQ32 467 aa10.15□□□□□ -0.78
SSB-209ENST00000470621 MMP20O60882 483 aa10.14□□□□□ -0.79
SSB-209ENST00000470621 C8orf34Q49A92 452 aa10.14□□□□□ -0.79
SSB-209ENST00000470621 UBE2OQ9C0C9 1292 aaKnown RBP10.14□□□□□ -0.79
SSB-209ENST00000470621 TMEM63CQ9P1W3 806 aa10.14□□□□□ -0.79
SSB-209ENST00000470621 BIN2Q9UBW5 565 aaPredicted RBP10.14□□□□□ -0.79
SSB-209ENST00000470621 PROCP04070 461 aa10.13□□□□□ -0.79
SSB-209ENST00000470621 ADH7P40394 386 aa10.13□□□□□ -0.79
SSB-209ENST00000470621 DHX32Q7L7V1 743 aaKnown RBP10.13□□□□□ -0.79
SSB-209ENST00000470621 NLRP13Q86W25 1043 aa10.13□□□□□ -0.79
SSB-209ENST00000470621 ELOA3CA0A087WX78 387 aaPredicted RBP10.12□□□□□ -0.79
SSB-209ENST00000470621 ELOA3DA6NLF2 546 aaPredicted RBP10.12□□□□□ -0.79
SSB-209ENST00000470621 MLLT1Q03111 559 aaPredicted RBP10.12□□□□□ -0.79
SSB-209ENST00000470621 ELOA3BQ3SY89 546 aa10.12□□□□□ -0.79
SSB-209ENST00000470621 GJD3Q8N144 294 aa10.12□□□□□ -0.79
SSB-209ENST00000470621 ELOA3Q8NG57 546 aa10.12□□□□□ -0.79
SSB-209ENST00000470621 EFCC1Q9HA90 598 aa10.12□□□□□ -0.79
SSB-209ENST00000470621 DNAJB12Q9NXW2 375 aaKnown RBP10.12□□□□□ -0.79
SSB-209ENST00000470621 ADARB2-AS1A8MUL3 147 aa10.11□□□□□ -0.79
SSB-209ENST00000470621 ZBTB42B2RXF5 422 aa10.11□□□□□ -0.79
SSB-209ENST00000470621 MAP3K6O95382 1288 aa10.11□□□□□ -0.79
SSB-209ENST00000470621 ZNF438Q7Z4V0 828 aa10.11□□□□□ -0.79
SSB-209ENST00000470621 NAGPAQ9UK23 515 aa10.11□□□□□ -0.79
SSB-209ENST00000470621 BRPF3Q9ULD4 1205 aa10.11□□□□□ -0.79
SSB-209ENST00000470621 FNDC3AQ9Y2H6 1198 aaKnown RBP10.11□□□□□ -0.79
SSB-209ENST00000470621 CYP2E1P05181 493 aaPredicted RBP10.1□□□□□ -0.79
SSB-209ENST00000470621 HOXB4P17483 251 aaPredicted RBP10.1□□□□□ -0.79
SSB-209ENST00000470621 CHSY3Q70JA7 882 aa10.1□□□□□ -0.79
SSB-209ENST00000470621 ELP3Q9H9T3 547 aa10.1□□□□□ -0.79
SSB-209ENST00000470621 SLC6A14Q9UN76 642 aa10.1□□□□□ -0.79
SSB-209ENST00000470621 PATL2C9JE40 543 aaKnown RBP10.09□□□□□ -0.79
SSB-209ENST00000470621 PCSK2P16519 638 aa10.09□□□□□ -0.79
SSB-209ENST00000470621 PDE12Q6L8Q7 609 aaKnown RBP10.09□□□□□ -0.79
SSB-209ENST00000470621 BTBD6Q96KE9 485 aa10.09□□□□□ -0.79
SSB-209ENST00000470621 ABI2Q9NYB9 513 aaPredicted RBP10.09□□□□□ -0.79
SSB-209ENST00000470621 TLR7Q9NYK1 1049 aaKnown RBP10.09□□□□□ -0.79
SSB-209ENST00000470621 STARD13Q9Y3M8 1113 aa10.09□□□□□ -0.79
SSB-209ENST00000470621 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.09□□□□□ -0.79
SSB-209ENST00000470621 NDUFB5O43674 189 aa10.08□□□□□ -0.8
SSB-209ENST00000470621 AMPD1P23109 780 aa10.08□□□□□ -0.8
SSB-209ENST00000470621 COL13A1Q5TAT6 717 aaPredicted RBP10.08□□□□□ -0.8
SSB-209ENST00000470621 HFE2Q6ZVN8 426 aa10.08□□□□□ -0.8
SSB-209ENST00000470621 NSUN5Q96P11 429 aaKnown RBP10.08□□□□□ -0.8
SSB-209ENST00000470621 CNTN3Q9P232 1028 aa10.08□□□□□ -0.8
SSB-209ENST00000470621 FOXD3Q9UJU5 478 aaPredicted RBP10.08□□□□□ -0.8
SSB-209ENST00000470621 IGHA2P01877 340 aa10.07□□□□□ -0.8
SSB-209ENST00000470621 SNRPNP63162 240 aaKnown RBP10.07□□□□□ -0.8
SSB-209ENST00000470621 GPLD1P80108 840 aa10.07□□□□□ -0.8
SSB-209ENST00000470621 OR13H1Q8NG92 308 aa10.07□□□□□ -0.8
SSB-209ENST00000470621 TRPM4Q8TD43 1214 aa10.07□□□□□ -0.8
SSB-209ENST00000470621 GPR182O15218 404 aa10.06□□□□□ -0.8
SSB-209ENST00000470621 ALBP02768 609 aa10.06□□□□□ -0.8
SSB-209ENST00000470621 RPLP1P05386 114 aaKnown RBP10.06□□□□□ -0.8
SSB-209ENST00000470621 CPB1P15086 417 aa10.06□□□□□ -0.8
SSB-209ENST00000470621 USP5P45974 858 aa10.06□□□□□ -0.8
SSB-209ENST00000470621 XP32Q5T750 250 aa10.06□□□□□ -0.8
SSB-209ENST00000470621 XKR5Q6UX68 686 aa10.06□□□□□ -0.8
SSB-209ENST00000470621 C8orf86Q6ZUL3 223 aa10.06□□□□□ -0.8
SSB-209ENST00000470621 C1orf127Q8N9H9 656 aa10.06□□□□□ -0.8
SSB-209ENST00000470621 FAM129BQ96TA1 746 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms