RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 RCAN3Q9UKA8 241 aa17.46■□□□□ 0.39
LINC00173-201ENST00000470091 SCN4AP35499 1836 aa17.46■□□□□ 0.39
LINC00173-201ENST00000470091 SNED1Q8TER0 1413 aa17.46■□□□□ 0.39
LINC00173-201ENST00000470091 ABCC4O15439 1325 aa17.46■□□□□ 0.38
LINC00173-201ENST00000470091 FANCIQ9NVI1 1328 aa17.46■□□□□ 0.38
LINC00173-201ENST00000470091 HDGFL1Q5TGJ6 251 aa17.45■□□□□ 0.38
LINC00173-201ENST00000470091 RIC1Q4ADV7 1423 aa17.45■□□□□ 0.38
LINC00173-201ENST00000470091 COL4A5P29400 1685 aa17.45■□□□□ 0.38
LINC00173-201ENST00000470091 BBOX1O75936 387 aa17.44■□□□□ 0.38
LINC00173-201ENST00000470091 VEGFBP49765 207 aa17.44■□□□□ 0.38
LINC00173-201ENST00000470091 DDX46Q7L014 1031 aaKnown RBP17.44■□□□□ 0.38
LINC00173-201ENST00000470091 TSR2Q969E8 191 aaKnown RBP17.44■□□□□ 0.38
LINC00173-201ENST00000470091 CNTNAP1P78357 1384 aa17.43■□□□□ 0.38
LINC00173-201ENST00000470091 ATP5J2-PTCD1G3V325 749 aa17.43■□□□□ 0.38
LINC00173-201ENST00000470091 NEFLP07196 543 aa17.43■□□□□ 0.38
LINC00173-201ENST00000470091 SCNN1DP51172 638 aa17.43■□□□□ 0.38
LINC00173-201ENST00000470091 CALD1Q05682 793 aaKnown RBP17.43■□□□□ 0.38
LINC00173-201ENST00000470091 FMR1Q06787 632 aaKnown RBP eCLIP17.43■□□□□ 0.38
LINC00173-201ENST00000470091 DPP8Q6V1X1 898 aaPredicted RBP17.43■□□□□ 0.38
LINC00173-201ENST00000470091 SH3TC1Q8TE82 1336 aa17.43■□□□□ 0.38
LINC00173-201ENST00000470091 RTL5Q5HYW3 569 aaPredicted RBP17.42■□□□□ 0.38
LINC00173-201ENST00000470091 ANKRD13DQ6ZTN6 518 aa17.42■□□□□ 0.38
LINC00173-201ENST00000470091 SP8Q8IXZ3 490 aa17.42■□□□□ 0.38
LINC00173-201ENST00000470091 MPNDQ8N594 471 aa17.42■□□□□ 0.38
LINC00173-201ENST00000470091 CXCL9Q07325 125 aa17.41■□□□□ 0.38
LINC00173-201ENST00000470091 DEFB115Q30KQ5 88 aa17.41■□□□□ 0.38
LINC00173-201ENST00000470091 SUPT20HQ8NEM7 779 aa17.41■□□□□ 0.38
LINC00173-201ENST00000470091 FAM89AQ96GI7 184 aa17.41■□□□□ 0.38
LINC00173-201ENST00000470091 IFT57Q9NWB7 429 aa17.41■□□□□ 0.38
LINC00173-201ENST00000470091 ZNRF3Q9ULT6 936 aa17.41■□□□□ 0.38
LINC00173-201ENST00000470091 ABT1Q9ULW3 272 aaKnown RBP17.41■□□□□ 0.38
LINC00173-201ENST00000470091 FOXN1O15353 648 aa17.4■□□□□ 0.38
LINC00173-201ENST00000470091 RAD17O75943 681 aa17.4■□□□□ 0.38
LINC00173-201ENST00000470091 IRX6P78412 446 aaPredicted RBP17.4■□□□□ 0.38
LINC00173-201ENST00000470091 PLBD2Q8NHP8 589 aa17.4■□□□□ 0.38
LINC00173-201ENST00000470091 CFAP44Q96MT7 982 aa17.4■□□□□ 0.38
LINC00173-201ENST00000470091 DBF4Q9UBU7 674 aaPredicted RBP17.4■□□□□ 0.38
LINC00173-201ENST00000470091 TRAF5O00463 557 aa17.39■□□□□ 0.37
LINC00173-201ENST00000470091 ELL2O00472 640 aaPredicted RBP17.39■□□□□ 0.37
LINC00173-201ENST00000470091 GNAI1P63096 354 aa17.39■□□□□ 0.37
LINC00173-201ENST00000470091 GRAPQ13588 217 aa17.39■□□□□ 0.37
LINC00173-201ENST00000470091 GRAPLQ8TC17 118 aaPredicted RBP17.39■□□□□ 0.37
LINC00173-201ENST00000470091 RTFDC1Q9BY42 306 aaPredicted RBP17.39■□□□□ 0.37
LINC00173-201ENST00000470091 VPS33BQ9H267 617 aa17.39■□□□□ 0.37
LINC00173-201ENST00000470091 MBIPQ9NS73 344 aa17.39■□□□□ 0.37
LINC00173-201ENST00000470091 ZNF853P0CG23 659 aa17.38■□□□□ 0.37
LINC00173-201ENST00000470091 GMPSP49915 693 aaPredicted RBP17.38■□□□□ 0.37
LINC00173-201ENST00000470091 RRP1P56182 461 aaKnown RBP17.38■□□□□ 0.37
LINC00173-201ENST00000470091 USP50Q70EL3 339 aaPredicted RBP17.38■□□□□ 0.37
LINC00173-201ENST00000470091 AIDAQ96BJ3 306 aa17.38■□□□□ 0.37
LINC00173-201ENST00000470091 HYPKQ9NX55 129 aa17.38■□□□□ 0.37
LINC00173-201ENST00000470091 GPRC5DQ9NZD1 345 aa17.38■□□□□ 0.37
LINC00173-201ENST00000470091 HOXB7P09629 217 aa17.37■□□□□ 0.37
LINC00173-201ENST00000470091 EXOSC9Q06265 439 aaKnown RBP17.37■□□□□ 0.37
LINC00173-201ENST00000470091 GRM1Q13255 1194 aa17.37■□□□□ 0.37
LINC00173-201ENST00000470091 CIAPIN1Q6FI81 312 aa17.37■□□□□ 0.37
LINC00173-201ENST00000470091 PAXIP1Q6ZW49 1069 aaPredicted RBP17.37■□□□□ 0.37
LINC00173-201ENST00000470091 ISCA1Q9BUE6 129 aa17.37■□□□□ 0.37
LINC00173-201ENST00000470091 BCL2L13Q9BXK5 485 aa17.37■□□□□ 0.37
LINC00173-201ENST00000470091 ADARB2Q9NS39 739 aaKnown RBP17.37■□□□□ 0.37
LINC00173-201ENST00000470091 RASSF10A6NK89 507 aa17.36■□□□□ 0.37
LINC00173-201ENST00000470091 KIAA2012Q0VF49 1180 aa17.36■□□□□ 0.37
LINC00173-201ENST00000470091 RIC3Q7Z5B4 369 aa17.36■□□□□ 0.37
LINC00173-201ENST00000470091 CELF1Q92879 486 aaKnown RBP17.36■□□□□ 0.37
LINC00173-201ENST00000470091 NSFL1CQ9UNZ2 370 aaKnown RBP17.36■□□□□ 0.37
LINC00173-201ENST00000470091 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
LINC00173-201ENST00000470091 RIMBP2O15034 1052 aa17.35■□□□□ 0.37
LINC00173-201ENST00000470091 TNIP1Q15025 636 aa17.35■□□□□ 0.37
LINC00173-201ENST00000470091 PHAXQ9H814 394 aaKnown RBP17.35■□□□□ 0.37
LINC00173-201ENST00000470091 WDR33Q9C0J8 1336 aaKnown RBP17.35■□□□□ 0.37
LINC00173-201ENST00000470091 ADAMTSL1Q8N6G6 1762 aa17.35■□□□□ 0.37
LINC00173-201ENST00000470091 C6orf229H3BNL8 230 aa17.34■□□□□ 0.37
LINC00173-201ENST00000470091 IRS4O14654 1257 aaPredicted RBP17.34■□□□□ 0.37
LINC00173-201ENST00000470091 TAF1P21675 1872 aa17.34■□□□□ 0.37
LINC00173-201ENST00000470091 CTCFP49711 727 aaPredicted RBP17.34■□□□□ 0.37
LINC00173-201ENST00000470091 CST9Q5W186 159 aa17.34■□□□□ 0.37
LINC00173-201ENST00000470091 JARID2Q92833 1246 aaPredicted RBP17.34■□□□□ 0.37
LINC00173-201ENST00000470091 WBP1LQ9NX94 342 aa17.34■□□□□ 0.37
LINC00173-201ENST00000470091 SHTN1A0MZ66 631 aa17.33■□□□□ 0.36
LINC00173-201ENST00000470091 YDJCA8MPS7 323 aa17.33■□□□□ 0.36
LINC00173-201ENST00000470091 LBX1P52954 281 aa17.33■□□□□ 0.36
LINC00173-201ENST00000470091 SF3B3Q15393 1217 aaKnown RBP17.33■□□□□ 0.36
LINC00173-201ENST00000470091 WASHC4Q2M389 1173 aa17.33■□□□□ 0.36
LINC00173-201ENST00000470091 TMC4Q7Z404 712 aa17.33■□□□□ 0.36
LINC00173-201ENST00000470091 GLIS2Q9BZE0 524 aaPredicted RBP17.33■□□□□ 0.36
LINC00173-201ENST00000470091 CNOT7Q9UIV1 285 aaKnown RBP17.33■□□□□ 0.36
LINC00173-201ENST00000470091 GPSM2P81274 684 aa17.32■□□□□ 0.36
LINC00173-201ENST00000470091 TRIM28Q13263 835 aaKnown RBP17.32■□□□□ 0.36
LINC00173-201ENST00000470091 CYP4F22Q6NT55 531 aa17.32■□□□□ 0.36
LINC00173-201ENST00000470091 C8orf58Q8NAV2 365 aa17.32■□□□□ 0.36
LINC00173-201ENST00000470091 CAPNS2Q96L46 248 aa17.32■□□□□ 0.36
LINC00173-201ENST00000470091 MYD88Q99836 296 aa17.32■□□□□ 0.36
LINC00173-201ENST00000470091 DBNDD1Q9H9R9 158 aa17.32■□□□□ 0.36
LINC00173-201ENST00000470091 ZBTB12Q9Y330 459 aaPredicted RBP17.32■□□□□ 0.36
LINC00173-201ENST00000470091 LAMB2P55268 1798 aa17.31■□□□□ 0.36
LINC00173-201ENST00000470091 ANKRD36CQ5JPF3 1778 aa17.31■□□□□ 0.36
LINC00173-201ENST00000470091 BCAR3O75815 825 aa17.31■□□□□ 0.36
LINC00173-201ENST00000470091 CT47B1P0C2W7 299 aaPredicted RBP17.31■□□□□ 0.36
LINC00173-201ENST00000470091 RARSP54136 660 aaKnown RBP17.31■□□□□ 0.36
LINC00173-201ENST00000470091 HIRAP54198 1017 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms