RNA–Protein interactions for RNA: ENST00000469923.5

SHROOM3-203, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 764 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-203ENST00000469923 DOK7Q18PE1 504 aa11.91□□□□□ -0.5
SHROOM3-203ENST00000469923 EAPPQ56P03 285 aaPredicted RBP11.91□□□□□ -0.5
SHROOM3-203ENST00000469923 HSP90AB3PQ58FF7 597 aa11.91□□□□□ -0.5
SHROOM3-203ENST00000469923 MAP1SQ66K74 1059 aaPredicted RBP11.91□□□□□ -0.5
SHROOM3-203ENST00000469923 DDX46Q7L014 1031 aaKnown RBP11.91□□□□□ -0.5
SHROOM3-203ENST00000469923 GRAPLQ8TC17 118 aaPredicted RBP11.91□□□□□ -0.5
SHROOM3-203ENST00000469923 CDCA7LQ96GN5 454 aa11.91□□□□□ -0.5
SHROOM3-203ENST00000469923 IBTKQ9P2D0 1353 aaPredicted RBP11.91□□□□□ -0.5
SHROOM3-203ENST00000469923 PPIP5K2O43314 1243 aa11.9□□□□□ -0.5
SHROOM3-203ENST00000469923 BBOX1O75936 387 aa11.9□□□□□ -0.5
SHROOM3-203ENST00000469923 ITGBL1O95965 494 aaPredicted RBP11.9□□□□□ -0.5
SHROOM3-203ENST00000469923 SCNN1DP51172 638 aa11.9□□□□□ -0.5
SHROOM3-203ENST00000469923 APLP1P51693 650 aa11.9□□□□□ -0.5
SHROOM3-203ENST00000469923 FSTL1Q12841 308 aa11.9□□□□□ -0.5
SHROOM3-203ENST00000469923 RIC1Q4ADV7 1423 aa11.9□□□□□ -0.5
SHROOM3-203ENST00000469923 SOGA3Q5TF21 947 aa11.9□□□□□ -0.5
SHROOM3-203ENST00000469923 CCDC30Q5VVM6 783 aa11.9□□□□□ -0.5
SHROOM3-203ENST00000469923 KSR2Q6VAB6 950 aa11.9□□□□□ -0.5
SHROOM3-203ENST00000469923 MPNDQ8N594 471 aa11.9□□□□□ -0.5
SHROOM3-203ENST00000469923 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
SHROOM3-203ENST00000469923 SNAP23O00161 211 aa11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 EGFRP00533 1210 aa11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 HIRAP54198 1017 aaPredicted RBP11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 GOLGA2Q08379 1002 aa11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 CHADLQ6NUI6 762 aa11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 DPP8Q6V1X1 898 aaPredicted RBP11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 ZBTB38Q8NAP3 1195 aaPredicted RBP11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 SMC1BQ8NDV3 1235 aa11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 L3MBTL3Q96JM7 780 aaPredicted RBP11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 RTFDC1Q9BY42 306 aaPredicted RBP11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 NSFL1CQ9UNZ2 370 aaKnown RBP11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 CLEC11AQ9Y240 323 aa11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 DICER1Q9UPY3 1922 aaKnown RBP11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 LAMB2P55268 1798 aa11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 TIAM2Q8IVF5 1701 aa11.89□□□□□ -0.51
SHROOM3-203ENST00000469923 ZC3H4Q9UPT8 1303 aaKnown RBP11.88□□□□□ -0.51
SHROOM3-203ENST00000469923 TRAF5O00463 557 aa11.88□□□□□ -0.51
SHROOM3-203ENST00000469923 EPHX2P34913 555 aa11.88□□□□□ -0.51
SHROOM3-203ENST00000469923 CASP7P55210 303 aa11.88□□□□□ -0.51
SHROOM3-203ENST00000469923 RPS8P62241 208 aaKnown RBP11.88□□□□□ -0.51
SHROOM3-203ENST00000469923 WDR63Q8IWG1 891 aa11.88□□□□□ -0.51
SHROOM3-203ENST00000469923 DBNDD1Q9H9R9 158 aa11.88□□□□□ -0.51
SHROOM3-203ENST00000469923 CWC25Q9NXE8 425 aaPredicted RBP11.88□□□□□ -0.51
SHROOM3-203ENST00000469923 LTBP1Q14766 1721 aa11.88□□□□□ -0.51
SHROOM3-203ENST00000469923 ARFGEF2Q9Y6D5 1785 aa11.87□□□□□ -0.51
SHROOM3-203ENST00000469923 WDR90Q96KV7 1748 aa11.87□□□□□ -0.51
SHROOM3-203ENST00000469923 NEURL1BA8MQ27 555 aa11.87□□□□□ -0.51
SHROOM3-203ENST00000469923 H7C1W4 665 aa11.87□□□□□ -0.51
SHROOM3-203ENST00000469923 PCCAP05165 728 aaPredicted RBP11.87□□□□□ -0.51
SHROOM3-203ENST00000469923 GMPSP49915 693 aaPredicted RBP11.87□□□□□ -0.51
SHROOM3-203ENST00000469923 CALD1Q05682 793 aaKnown RBP11.87□□□□□ -0.51
SHROOM3-203ENST00000469923 FLIIQ13045 1269 aa11.87□□□□□ -0.51
SHROOM3-203ENST00000469923 EPHA10Q5JZY3 1008 aa11.87□□□□□ -0.51
SHROOM3-203ENST00000469923 GREM2Q9H772 168 aa11.87□□□□□ -0.51
SHROOM3-203ENST00000469923 MKRN1Q9UHC7 482 aaKnown RBP11.87□□□□□ -0.51
SHROOM3-203ENST00000469923 HACL1Q9UJ83 578 aa11.87□□□□□ -0.51
SHROOM3-203ENST00000469923 IL16Q14005 1332 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 DDX60Q8IY21 1712 aaKnown RBP11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 C6orf229H3BNL8 230 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 CC2D2BQ6DHV5 1058 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 GPC2Q8N158 579 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 CCDC191Q8NCU4 936 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 TTLL11Q8NHH1 800 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 TBC1D16Q8TBP0 767 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 TRPM4Q8TD43 1214 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 JDP2Q8WYK2 163 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 KLRG1Q96E93 195 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 MXD3Q9BW11 206 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 ZNRF3Q9ULT6 936 aa11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 SCAF8Q9UPN6 1271 aaKnown RBP11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 ASTN2O75129 1339 aaPredicted RBP11.86□□□□□ -0.51
SHROOM3-203ENST00000469923 KLRK1P26718 216 aa11.85□□□□□ -0.51
SHROOM3-203ENST00000469923 EIF6P56537 245 aaKnown RBP11.85□□□□□ -0.51
SHROOM3-203ENST00000469923 KIAA2012Q0VF49 1180 aa11.85□□□□□ -0.51
SHROOM3-203ENST00000469923 UBE3BQ7Z3V4 1068 aa11.85□□□□□ -0.51
SHROOM3-203ENST00000469923 TXNRD3Q86VQ6 643 aa11.85□□□□□ -0.51
SHROOM3-203ENST00000469923 NIM1KQ8IY84 436 aa11.85□□□□□ -0.51
SHROOM3-203ENST00000469923 CNTROBQ8N137 903 aa11.85□□□□□ -0.51
SHROOM3-203ENST00000469923 PASKQ96RG2 1323 aa11.85□□□□□ -0.51
SHROOM3-203ENST00000469923 DUOX1Q9NRD9 1551 aa11.84□□□□□ -0.51
SHROOM3-203ENST00000469923 RTL9Q8NET4 1388 aa11.84□□□□□ -0.51
SHROOM3-203ENST00000469923 PSMD14O00487 310 aa11.84□□□□□ -0.51
SHROOM3-203ENST00000469923 PDE8AO60658 829 aa11.84□□□□□ -0.51
SHROOM3-203ENST00000469923 GCKRQ14397 625 aa11.84□□□□□ -0.51
SHROOM3-203ENST00000469923 CST9Q5W186 159 aa11.84□□□□□ -0.51
SHROOM3-203ENST00000469923 SAMD7Q7Z3H4 446 aa11.84□□□□□ -0.51
SHROOM3-203ENST00000469923 ANKRD36CQ5JPF3 1778 aa11.84□□□□□ -0.51
SHROOM3-203ENST00000469923 FOXO4P98177 505 aa11.83□□□□□ -0.52
SHROOM3-203ENST00000469923 FKBP5Q13451 457 aaPredicted RBP11.83□□□□□ -0.52
SHROOM3-203ENST00000469923 WASHC4Q2M389 1173 aa11.83□□□□□ -0.52
SHROOM3-203ENST00000469923 BEND3Q5T5X7 828 aa11.83□□□□□ -0.52
SHROOM3-203ENST00000469923 RBM26Q5T8P6 1007 aaKnown RBP11.83□□□□□ -0.52
SHROOM3-203ENST00000469923 LDHDQ86WU2 507 aa11.83□□□□□ -0.52
SHROOM3-203ENST00000469923 HELBQ8NG08 1087 aaPredicted RBP11.83□□□□□ -0.52
SHROOM3-203ENST00000469923 DNAAF4Q8WXU2 420 aa11.83□□□□□ -0.52
SHROOM3-203ENST00000469923 ZNF594Q96JF6 807 aaPredicted RBP11.83□□□□□ -0.52
SHROOM3-203ENST00000469923 BCL2L13Q9BXK5 485 aa11.83□□□□□ -0.52
SHROOM3-203ENST00000469923 STK31Q9BXU1 1019 aa11.83□□□□□ -0.52
SHROOM3-203ENST00000469923 MINPP1Q9UNW1 487 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms