RNA–Protein interactions for RNA: ENST00000469786.2

PSMD4-209, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 408 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-209	ENST00000469786	AEBP1	Q8IUX7	1158 aa		10.84	□□□□□ -0.67
PSMD4-209	ENST00000469786	NIM1K	Q8IY84	436 aa		10.84	□□□□□ -0.67
PSMD4-209	ENST00000469786	PIP4P2	Q8N4L2	257 aa		10.84	□□□□□ -0.67
PSMD4-209	ENST00000469786	CCER1	Q8TC90	406 aa	Predicted RBP	10.84	□□□□□ -0.67
PSMD4-209	ENST00000469786	CARD11	Q9BXL7	1154 aa		10.84	□□□□□ -0.67
PSMD4-209	ENST00000469786	PRDM6	Q9NQX0	595 aa		10.84	□□□□□ -0.67
PSMD4-209	ENST00000469786	ZNRF3	Q9ULT6	936 aa		10.84	□□□□□ -0.67
PSMD4-209	ENST00000469786	EYS	Q5T1H1	3165 aa		10.83	□□□□□ -0.68
PSMD4-209	ENST00000469786	ADM5	C9JUS6	153 aa		10.83	□□□□□ -0.68
PSMD4-209	ENST00000469786	HAX1	O00165	279 aa		10.83	□□□□□ -0.68
PSMD4-209	ENST00000469786	STARD3NL	O95772	234 aa		10.83	□□□□□ -0.68
PSMD4-209	ENST00000469786	TMEM132A	Q24JP5	1023 aa		10.83	□□□□□ -0.68
PSMD4-209	ENST00000469786	C1orf141	Q5JVX7	400 aa		10.83	□□□□□ -0.68
PSMD4-209	ENST00000469786	CLEC4G	Q6UXB4	293 aa		10.83	□□□□□ -0.68
PSMD4-209	ENST00000469786	KRT26	Q7Z3Y9	468 aa		10.83	□□□□□ -0.68
PSMD4-209	ENST00000469786	NBPF5P	Q86XG9	351 aa	Predicted RBP	10.83	□□□□□ -0.68
PSMD4-209	ENST00000469786	CNOT7	Q9UIV1	285 aa	Known RBP	10.83	□□□□□ -0.68
PSMD4-209	ENST00000469786	TTC28	Q96AY4	2481 aa		10.83	□□□□□ -0.68
PSMD4-209	ENST00000469786	KIF7	Q2M1P5	1343 aa		10.83	□□□□□ -0.68
PSMD4-209	ENST00000469786	RGL2	O15211	777 aa		10.82	□□□□□ -0.68
PSMD4-209	ENST00000469786	AOC3	Q16853	763 aa		10.82	□□□□□ -0.68
PSMD4-209	ENST00000469786	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.82	□□□□□ -0.68
PSMD4-209	ENST00000469786	ABCC12	Q96J65	1359 aa		10.81	□□□□□ -0.68
PSMD4-209	ENST00000469786	HEG1	Q9ULI3	1381 aa		10.81	□□□□□ -0.68
PSMD4-209	ENST00000469786	YDJC	A8MPS7	323 aa		10.81	□□□□□ -0.68
PSMD4-209	ENST00000469786	RNMT	O43148	476 aa	Known RBP	10.81	□□□□□ -0.68
PSMD4-209	ENST00000469786	PPIP5K2	O43314	1243 aa		10.81	□□□□□ -0.68
PSMD4-209	ENST00000469786	CAP1	Q01518	475 aa		10.81	□□□□□ -0.68
PSMD4-209	ENST00000469786	LRCH3	Q96II8	777 aa		10.81	□□□□□ -0.68
PSMD4-209	ENST00000469786	STXBP5L	Q9Y2K9	1186 aa		10.81	□□□□□ -0.68
PSMD4-209	ENST00000469786	PTPN22	Q9Y2R2	807 aa		10.81	□□□□□ -0.68
PSMD4-209	ENST00000469786	ZNF646	O15015	1829 aa	Predicted RBP	10.81	□□□□□ -0.68
PSMD4-209	ENST00000469786	NUP98	P52948	1817 aa		10.8	□□□□□ -0.68
PSMD4-209	ENST00000469786		A0A1W2PPC1	479 aa		10.8	□□□□□ -0.68
PSMD4-209	ENST00000469786	TPTE2	Q6XPS3	522 aa		10.8	□□□□□ -0.68
PSMD4-209	ENST00000469786	SAMD7	Q7Z3H4	446 aa		10.8	□□□□□ -0.68
PSMD4-209	ENST00000469786	DPF2	Q92785	391 aa		10.8	□□□□□ -0.68
PSMD4-209	ENST00000469786	ZNF496	Q96IT1	587 aa	Predicted RBP	10.8	□□□□□ -0.68
PSMD4-209	ENST00000469786	ZNF333	Q96JL9	665 aa		10.8	□□□□□ -0.68
PSMD4-209	ENST00000469786	TRIM17	Q9Y577	477 aa		10.8	□□□□□ -0.68
PSMD4-209	ENST00000469786	ZNF609	O15014	1411 aa		10.8	□□□□□ -0.68
PSMD4-209	ENST00000469786	DUOX1	Q9NRD9	1551 aa		10.8	□□□□□ -0.68
PSMD4-209	ENST00000469786	NPHP1	O15259	732 aa		10.79	□□□□□ -0.68
PSMD4-209	ENST00000469786	A1BG	P04217	495 aa		10.79	□□□□□ -0.68
PSMD4-209	ENST00000469786	GPR153	Q6NV75	609 aa		10.79	□□□□□ -0.68
PSMD4-209	ENST00000469786	DZIP3	Q86Y13	1208 aa	Known RBP	10.79	□□□□□ -0.68
PSMD4-209	ENST00000469786	MICALL2	Q8IY33	904 aa		10.79	□□□□□ -0.68
PSMD4-209	ENST00000469786	PRUNE2	Q8WUY3	3088 aa		10.79	□□□□□ -0.68
PSMD4-209	ENST00000469786	SCN9A	Q15858	1988 aa		10.79	□□□□□ -0.68
PSMD4-209	ENST00000469786	TAF1	P21675	1872 aa		10.78	□□□□□ -0.68
PSMD4-209	ENST00000469786	FKBP1B	P68106	108 aa		10.78	□□□□□ -0.68
PSMD4-209	ENST00000469786	CDCA5	Q96FF9	252 aa		10.78	□□□□□ -0.68
PSMD4-209	ENST00000469786	CRAMP1	Q96RY5	1269 aa		10.78	□□□□□ -0.68
PSMD4-209	ENST00000469786	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	10.78	□□□□□ -0.68
PSMD4-209	ENST00000469786	ZBTB12	Q9Y330	459 aa	Predicted RBP	10.78	□□□□□ -0.68
PSMD4-209	ENST00000469786		H7C1D1	291 aa		10.77	□□□□□ -0.69
PSMD4-209	ENST00000469786	RAD17	O75943	681 aa		10.77	□□□□□ -0.69
PSMD4-209	ENST00000469786	KIAA2012	Q0VF49	1180 aa		10.77	□□□□□ -0.69
PSMD4-209	ENST00000469786	UBE2Q1	Q7Z7E8	422 aa		10.77	□□□□□ -0.69
PSMD4-209	ENST00000469786	BCL2L13	Q9BXK5	485 aa		10.77	□□□□□ -0.69
PSMD4-209	ENST00000469786	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.77	□□□□□ -0.69
PSMD4-209	ENST00000469786	FBXO3	Q9UK99	471 aa		10.77	□□□□□ -0.69
PSMD4-209	ENST00000469786	CLSPN	Q9HAW4	1339 aa		10.77	□□□□□ -0.69
PSMD4-209	ENST00000469786	LRRC37A	A6NMS7	1700 aa		10.76	□□□□□ -0.69
PSMD4-209	ENST00000469786	LAMB2	P55268	1798 aa		10.76	□□□□□ -0.69
PSMD4-209	ENST00000469786	POLA2	Q14181	598 aa		10.76	□□□□□ -0.69
PSMD4-209	ENST00000469786	TNIP1	Q15025	636 aa		10.76	□□□□□ -0.69
PSMD4-209	ENST00000469786	ASTN2	O75129	1339 aa	Predicted RBP	10.76	□□□□□ -0.69
PSMD4-209	ENST00000469786	PSME4	Q14997	1843 aa		10.75	□□□□□ -0.69
PSMD4-209	ENST00000469786	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	10.75	□□□□□ -0.69
PSMD4-209	ENST00000469786	MOB2	Q70IA6	237 aa		10.75	□□□□□ -0.69
PSMD4-209	ENST00000469786	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
PSMD4-209	ENST00000469786	DCPS	Q96C86	337 aa	Known RBP	10.75	□□□□□ -0.69
PSMD4-209	ENST00000469786	NIP7	Q9Y221	180 aa	Known RBP eCLIP	10.75	□□□□□ -0.69
PSMD4-209	ENST00000469786	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.75	□□□□□ -0.69
PSMD4-209	ENST00000469786	ATP6V0A2	Q9Y487	856 aa		10.75	□□□□□ -0.69
PSMD4-209	ENST00000469786	ALPK3	Q96L96	1907 aa		10.75	□□□□□ -0.69
PSMD4-209	ENST00000469786	LAMA2	P24043	3122 aa	Known RBP	10.75	□□□□□ -0.69
PSMD4-209	ENST00000469786	ANKRD36C	Q5JPF3	1778 aa		10.75	□□□□□ -0.69
PSMD4-209	ENST00000469786	PRAMEF22	A3QJZ6	481 aa		10.74	□□□□□ -0.69
PSMD4-209	ENST00000469786	PPEF1	O14829	653 aa	Predicted RBP	10.74	□□□□□ -0.69
PSMD4-209	ENST00000469786	COL9A1	P20849	921 aa		10.74	□□□□□ -0.69
PSMD4-209	ENST00000469786	ZNF790	Q6PG37	636 aa		10.74	□□□□□ -0.69
PSMD4-209	ENST00000469786	BBX	Q8WY36	941 aa	Predicted RBP	10.74	□□□□□ -0.69
PSMD4-209	ENST00000469786	SHISA4	Q96DD7	197 aa		10.74	□□□□□ -0.69
PSMD4-209	ENST00000469786	MTMR10	Q9NXD2	777 aa		10.74	□□□□□ -0.69
PSMD4-209	ENST00000469786	DDX60	Q8IY21	1712 aa	Known RBP	10.74	□□□□□ -0.69
PSMD4-209	ENST00000469786	SSC5D	A1L4H1	1573 aa		10.73	□□□□□ -0.69
PSMD4-209	ENST00000469786	SULT6B1	Q6IMI4	303 aa		10.73	□□□□□ -0.69
PSMD4-209	ENST00000469786	C3orf67	Q6ZVT6	689 aa		10.73	□□□□□ -0.69
PSMD4-209	ENST00000469786	MPND	Q8N594	471 aa		10.73	□□□□□ -0.69
PSMD4-209	ENST00000469786	TMEM106C	Q9BVX2	250 aa		10.73	□□□□□ -0.69
PSMD4-209	ENST00000469786	IBTK	Q9P2D0	1353 aa	Predicted RBP	10.73	□□□□□ -0.69
PSMD4-209	ENST00000469786	WTIP	A6NIX2	430 aa	Predicted RBP	10.72	□□□□□ -0.69
PSMD4-209	ENST00000469786	PLA2G5	P39877	138 aa		10.72	□□□□□ -0.69
PSMD4-209	ENST00000469786	HLF	Q16534	295 aa		10.72	□□□□□ -0.69
PSMD4-209	ENST00000469786	GGA3	Q9NZ52	723 aa		10.72	□□□□□ -0.69
PSMD4-209	ENST00000469786	ZNF652	Q9Y2D9	606 aa		10.72	□□□□□ -0.69
PSMD4-209	ENST00000469786	RTL9	Q8NET4	1388 aa		10.72	□□□□□ -0.69
PSMD4-209	ENST00000469786	UBE2Q2L	H0YL09	131 aa		10.71	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms