RNA–Protein interactions for RNA: ENST00000469762.5

SMC4-210, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 3,998 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-210ENST00000469762 USPL1Q5W0Q7 1092 aa12.21□□□□□ -0.45
SMC4-210ENST00000469762 NCAPD2Q15021 1401 aa12.21□□□□□ -0.46
SMC4-210ENST00000469762 SPDYE4A6NLX3 237 aa12.21□□□□□ -0.46
SMC4-210ENST00000469762 TAF5LO75529 589 aa12.21□□□□□ -0.46
SMC4-210ENST00000469762 RESTQ13127 1097 aa12.21□□□□□ -0.46
SMC4-210ENST00000469762 CACTINQ8WUQ7 758 aaKnown RBP12.21□□□□□ -0.46
SMC4-210ENST00000469762 C9orf78Q9NZ63 289 aaPredicted RBP12.21□□□□□ -0.46
SMC4-210ENST00000469762 C5P01031 1676 aa12.21□□□□□ -0.46
SMC4-210ENST00000469762 TPM3P06753 285 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 STK3Q13188 491 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 EPHA10Q5JZY3 1008 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 TNMDQ9H2S6 317 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 NPHP3Q7Z494 1330 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 ADAMTS7Q9UKP4 1686 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 AKAP4Q5JQC9 854 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 DDX11Q96FC9 970 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 RNMTO43148 476 aaKnown RBP12.2□□□□□ -0.46
SMC4-210ENST00000469762 BLOC1S2Q6QNY1 142 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 ERC1Q8IUD2 1116 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 SPATA32Q96LK8 384 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 GRM8O00222 908 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 IQCB1Q15051 598 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 PDCL2Q8N4E4 241 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 DNAJC25Q9H1X3 360 aa12.2□□□□□ -0.46
SMC4-210ENST00000469762 ARID5BQ14865 1188 aa12.19□□□□□ -0.46
SMC4-210ENST00000469762 NDUFB9Q9Y6M9 179 aa12.19□□□□□ -0.46
SMC4-210ENST00000469762 SCAND2PQ9GZW5 306 aaPredicted RBP12.19□□□□□ -0.46
SMC4-210ENST00000469762 ZNF530Q6P9A1 599 aaPredicted RBP12.19□□□□□ -0.46
SMC4-210ENST00000469762 GTF3C6Q969F1 213 aa12.19□□□□□ -0.46
SMC4-210ENST00000469762 C16orf45Q96MC5 204 aaPredicted RBP12.19□□□□□ -0.46
SMC4-210ENST00000469762 SIL1Q9H173 461 aa12.19□□□□□ -0.46
SMC4-210ENST00000469762 PSMA5P28066 241 aa12.18□□□□□ -0.46
SMC4-210ENST00000469762 LINS1Q8NG48 757 aa12.18□□□□□ -0.46
SMC4-210ENST00000469762 GPATCH3Q96I76 525 aa12.18□□□□□ -0.46
SMC4-210ENST00000469762 USP16Q9Y5T5 823 aa12.18□□□□□ -0.46
SMC4-210ENST00000469762 ZNF609O15014 1411 aa12.18□□□□□ -0.46
SMC4-210ENST00000469762 C11orf57Q6ZUT1 292 aaPredicted RBP12.18□□□□□ -0.46
SMC4-210ENST00000469762 FTOQ9C0B1 505 aaKnown RBP eCLIP12.18□□□□□ -0.46
SMC4-210ENST00000469762 DDX19AQ9NUU7 478 aaKnown RBP12.18□□□□□ -0.46
SMC4-210ENST00000469762 EID1Q9Y6B2 187 aa12.18□□□□□ -0.46
SMC4-210ENST00000469762 ZNF142P52746 1687 aaPredicted RBP12.18□□□□□ -0.46
SMC4-210ENST00000469762 A0A087WWV3 80 aa12.18□□□□□ -0.46
SMC4-210ENST00000469762 USP27XA6NNY8 438 aa12.18□□□□□ -0.46
SMC4-210ENST00000469762 PDCP20941 246 aa12.18□□□□□ -0.46
SMC4-210ENST00000469762 TEFQ10587 303 aa12.18□□□□□ -0.46
SMC4-210ENST00000469762 GOLGA6L6A8MZA4 724 aa12.17□□□□□ -0.46
SMC4-210ENST00000469762 KCNJ4P48050 445 aa12.17□□□□□ -0.46
SMC4-210ENST00000469762 ZNF165P49910 485 aa12.17□□□□□ -0.46
SMC4-210ENST00000469762 BRF1Q92994 677 aa12.17□□□□□ -0.46
SMC4-210ENST00000469762 SEC62Q99442 399 aaKnown RBP12.17□□□□□ -0.46
SMC4-210ENST00000469762 FSD1Q9BTV5 496 aa12.17□□□□□ -0.46
SMC4-210ENST00000469762 CAMTA1Q9Y6Y1 1673 aa12.17□□□□□ -0.46
SMC4-210ENST00000469762 STOX1Q6ZVD7 989 aa12.17□□□□□ -0.46
SMC4-210ENST00000469762 GOLPH3LQ9H4A5 285 aa12.17□□□□□ -0.46
SMC4-210ENST00000469762 HIP1O00291 1037 aa12.17□□□□□ -0.46
SMC4-210ENST00000469762 CTDNEP1O95476 244 aa12.17□□□□□ -0.46
SMC4-210ENST00000469762 CCDC129Q6ZRS4 1044 aa12.17□□□□□ -0.46
SMC4-210ENST00000469762 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.17□□□□□ -0.46
SMC4-210ENST00000469762 DBNLQ9UJU6 430 aaKnown RBP12.17□□□□□ -0.46
SMC4-210ENST00000469762 SNW1Q13573 536 aaKnown RBP12.16□□□□□ -0.46
SMC4-210ENST00000469762 ANKRD1Q15327 319 aa12.16□□□□□ -0.46
SMC4-210ENST00000469762 TRIM5Q9C035 493 aa12.16□□□□□ -0.46
SMC4-210ENST00000469762 CYP21A2P08686 494 aa12.16□□□□□ -0.46
SMC4-210ENST00000469762 PDIA4P13667 645 aaKnown RBP12.16□□□□□ -0.46
SMC4-210ENST00000469762 RFX5P48382 616 aaPredicted RBP12.16□□□□□ -0.46
SMC4-210ENST00000469762 SCRN1Q12765 414 aa12.16□□□□□ -0.46
SMC4-210ENST00000469762 CTNNA3Q9UI47 895 aa12.16□□□□□ -0.46
SMC4-210ENST00000469762 OVOS2A0A0G2JMS6 1433 aa12.16□□□□□ -0.46
SMC4-210ENST00000469762 A0A0U1RQG5 324 aaPredicted RBP12.16□□□□□ -0.46
SMC4-210ENST00000469762 SMARCC2Q8TAQ2 1214 aa12.16□□□□□ -0.46
SMC4-210ENST00000469762 G3BP1Q13283 466 aaKnown RBP eCLIP12.15□□□□□ -0.461e-39■■■■■ 140
SMC4-210ENST00000469762 ERBB3P21860 1342 aa12.15□□□□□ -0.46
SMC4-210ENST00000469762 A0A0G2JLW4 131 aa12.15□□□□□ -0.46
SMC4-210ENST00000469762 SMTNL1A8MU46 457 aa12.15□□□□□ -0.46
SMC4-210ENST00000469762 SLFNL1Q499Z3 407 aa12.15□□□□□ -0.46
SMC4-210ENST00000469762 LRP10Q7Z4F1 713 aa12.15□□□□□ -0.46
SMC4-210ENST00000469762 TNNT1P13805 278 aa12.15□□□□□ -0.46
SMC4-210ENST00000469762 AIMP1Q12904 312 aaKnown RBP12.15□□□□□ -0.46
SMC4-210ENST00000469762 Q6ZUG5 572 aa12.15□□□□□ -0.46
SMC4-210ENST00000469762 ILDR1Q86SU0 546 aaPredicted RBP12.15□□□□□ -0.46
SMC4-210ENST00000469762 LRRC8AQ8IWT6 810 aa12.15□□□□□ -0.46
SMC4-210ENST00000469762 RBM33Q96EV2 1170 aaKnown RBP12.15□□□□□ -0.46
SMC4-210ENST00000469762 LRRC2Q9BYS8 371 aa12.15□□□□□ -0.46
SMC4-210ENST00000469762 HMG20BQ9P0W2 317 aa12.15□□□□□ -0.46
SMC4-210ENST00000469762 CLIP2Q9UDT6 1046 aa12.15□□□□□ -0.46
SMC4-210ENST00000469762 FER1L4A9Z1Z3 1794 aa12.14□□□□□ -0.47
SMC4-210ENST00000469762 CDC25BP30305 580 aa12.14□□□□□ -0.47
SMC4-210ENST00000469762 SARM1Q6SZW1 724 aa12.14□□□□□ -0.47
SMC4-210ENST00000469762 C14orf37Q86TY3 774 aa12.14□□□□□ -0.47
SMC4-210ENST00000469762 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.471e-26■■■■■ 198.7
SMC4-210ENST00000469762 PHF8Q9UPP1 1060 aa12.14□□□□□ -0.47
SMC4-210ENST00000469762 RGPD5Q99666 1765 aa12.14□□□□□ -0.47
SMC4-210ENST00000469762 NEURL1BA8MQ27 555 aa12.14□□□□□ -0.47
SMC4-210ENST00000469762 SYCP1Q15431 976 aa12.14□□□□□ -0.47
SMC4-210ENST00000469762 RNF20Q5VTR2 975 aa12.14□□□□□ -0.47
SMC4-210ENST00000469762 DHX40Q8IX18 779 aaKnown RBP12.14□□□□□ -0.47
SMC4-210ENST00000469762 ENGASEQ8NFI3 743 aa12.14□□□□□ -0.47
SMC4-210ENST00000469762 RBM6P78332 1123 aaKnown RBP12.14□□□□□ -0.47
SMC4-210ENST00000469762 NYAP1Q6ZVC0 841 aa12.14□□□□□ -0.47
SMC4-210ENST00000469762 NEK1Q96PY6 1258 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms