RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 FMNL2Q96PY5 1086 aa9.34□□□□□ -0.92
TPM3-215ENST00000469717 GOLPH3LQ9H4A5 285 aa9.34□□□□□ -0.92
TPM3-215ENST00000469717 CHGBP05060 677 aa9.33□□□□□ -0.92
TPM3-215ENST00000469717 SNW1Q13573 536 aaKnown RBP9.33□□□□□ -0.92
TPM3-215ENST00000469717 NBPF11Q86T75 865 aa9.33□□□□□ -0.92
TPM3-215ENST00000469717 C10orf67Q8IYJ2 551 aa9.33□□□□□ -0.92
TPM3-215ENST00000469717 DDX19AQ9NUU7 478 aaKnown RBP9.33□□□□□ -0.92
TPM3-215ENST00000469717 ADCY9O60503 1353 aa9.33□□□□□ -0.92
TPM3-215ENST00000469717 BECN2A8MW95 431 aa9.33□□□□□ -0.92
TPM3-215ENST00000469717 ZC3H6P61129 1189 aaKnown RBP9.33□□□□□ -0.92
TPM3-215ENST00000469717 KRBA2Q6ZNG9 492 aa9.33□□□□□ -0.92
TPM3-215ENST00000469717 FAM177A1Q8N128 213 aaPredicted RBP9.33□□□□□ -0.92
TPM3-215ENST00000469717 LRRC2Q9BYS8 371 aa9.33□□□□□ -0.92
TPM3-215ENST00000469717 PA2G4Q9UQ80 394 aaKnown RBP9.33□□□□□ -0.92
TPM3-215ENST00000469717 RIMS1Q86UR5 1692 aaKnown RBP9.33□□□□□ -0.92
TPM3-215ENST00000469717 SASH3O75995 380 aa9.33□□□□□ -0.92
TPM3-215ENST00000469717 BMS1Q14692 1282 aaKnown RBP9.33□□□□□ -0.92
TPM3-215ENST00000469717 CREB3L3Q68CJ9 461 aa9.33□□□□□ -0.92
TPM3-215ENST00000469717 DHX40Q8IX18 779 aaKnown RBP9.33□□□□□ -0.92
TPM3-215ENST00000469717 PPP1R13BQ96KQ4 1090 aa9.33□□□□□ -0.92
TPM3-215ENST00000469717 RNF216Q9NWF9 866 aaPredicted RBP9.33□□□□□ -0.92
TPM3-215ENST00000469717 LMTK2Q8IWU2 1503 aa9.33□□□□□ -0.92
TPM3-215ENST00000469717 RSPH14Q9UHP6 348 aa9.32□□□□□ -0.92
TPM3-215ENST00000469717 ELP1O95163 1332 aa9.32□□□□□ -0.92
TPM3-215ENST00000469717 EVA1CP58658 441 aa9.32□□□□□ -0.92
TPM3-215ENST00000469717 OS9Q13438 667 aaPredicted RBP9.32□□□□□ -0.92
TPM3-215ENST00000469717 NECTIN1Q15223 517 aa9.32□□□□□ -0.92
TPM3-215ENST00000469717 SSH3Q8TE77 659 aa9.32□□□□□ -0.92
TPM3-215ENST00000469717 ARMCX5Q6P1M9 558 aa9.32□□□□□ -0.92
TPM3-215ENST00000469717 BRF1Q92994 677 aa9.32□□□□□ -0.92
TPM3-215ENST00000469717 SCAND2PQ9GZW5 306 aaPredicted RBP9.32□□□□□ -0.92
TPM3-215ENST00000469717 SH2B1Q9NRF2 756 aaPredicted RBP9.32□□□□□ -0.92
TPM3-215ENST00000469717 MAP3K19Q56UN5 1328 aa9.32□□□□□ -0.92
TPM3-215ENST00000469717 TOB2Q14106 344 aaPredicted RBP9.31□□□□□ -0.92
TPM3-215ENST00000469717 STRN4Q9NRL3 753 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 DNAI1Q9UI46 699 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 RIMBP3CA6NJZ7 1639 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 RIMBP3BA6NNM3 1639 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 RIMBP3Q9UFD9 1639 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 GUCY1B3Q02153 619 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 ISM2Q6H9L7 571 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 EDC3Q96F86 508 aaKnown RBP9.31□□□□□ -0.92
TPM3-215ENST00000469717 TTC21BQ7Z4L5 1316 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 FRMPD1Q5SYB0 1578 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 BIN1O00499 593 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 TMC6Q7Z403 805 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 MRFAP1L1Q96HT8 127 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 ABCA9Q8IUA7 1624 aa9.31□□□□□ -0.92
TPM3-215ENST00000469717 EIF2S2P20042 333 aaKnown RBP9.3□□□□□ -0.92
TPM3-215ENST00000469717 SLC20A2Q08357 652 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 SLFNL1Q499Z3 407 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 HOMER1Q86YM7 354 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 ZSCAN31Q96LW9 406 aaPredicted RBP9.3□□□□□ -0.92
TPM3-215ENST00000469717 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.3□□□□□ -0.921e-10■■■□□ 17.4
TPM3-215ENST00000469717 NDUFB9Q9Y6M9 179 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 PIK3C2BO00750 1634 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 A0A0D9SFI3 127 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 ANKRD65E5RJM6 399 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 SLC27A2O14975 620 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 ZRANB2O95218 330 aaKnown RBP eCLIP9.3□□□□□ -0.92
TPM3-215ENST00000469717 SMC2O95347 1197 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 NMIQ13287 307 aaPredicted RBP9.3□□□□□ -0.92
TPM3-215ENST00000469717 CCAR1Q8IX12 1150 aaKnown RBP9.3□□□□□ -0.92
TPM3-215ENST00000469717 L2HGDHQ9H9P8 463 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 AATKQ6ZMQ8 1374 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 OAS2P29728 719 aaKnown RBP9.3□□□□□ -0.92
TPM3-215ENST00000469717 CDC25BP30305 580 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 CCDC93Q567U6 631 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 SEC62Q99442 399 aaKnown RBP9.3□□□□□ -0.92
TPM3-215ENST00000469717 CARD6Q9BX69 1037 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 XPO4Q9C0E2 1151 aaKnown RBP9.3□□□□□ -0.92
TPM3-215ENST00000469717 SIL1Q9H173 461 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 NLRP2Q9NX02 1062 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 PPP6R1Q9UPN7 881 aa9.3□□□□□ -0.92
TPM3-215ENST00000469717 ZKSCAN1P17029 563 aaPredicted RBP9.29□□□□□ -0.92
TPM3-215ENST00000469717 TNNT3P45378 269 aaPredicted RBP9.29□□□□□ -0.92
TPM3-215ENST00000469717 SARM1Q6SZW1 724 aa9.29□□□□□ -0.92
TPM3-215ENST00000469717 ZNF589Q86UQ0 364 aaPredicted RBP9.29□□□□□ -0.92
TPM3-215ENST00000469717 IFNKQ9P0W0 207 aa9.29□□□□□ -0.92
TPM3-215ENST00000469717 ORC3Q9UBD5 711 aaPredicted RBP9.29□□□□□ -0.92
TPM3-215ENST00000469717 RESTQ13127 1097 aa9.29□□□□□ -0.92
TPM3-215ENST00000469717 CCDC191Q8NCU4 936 aa9.29□□□□□ -0.92
TPM3-215ENST00000469717 NUDT16Q96DE0 195 aaKnown RBP9.29□□□□□ -0.92
TPM3-215ENST00000469717 TLR7Q9NYK1 1049 aaKnown RBP9.29□□□□□ -0.92
TPM3-215ENST00000469717 TNRQ92752 1358 aa9.29□□□□□ -0.92
TPM3-215ENST00000469717 AOX1Q06278 1338 aa9.29□□□□□ -0.92
TPM3-215ENST00000469717 URI1O94763 535 aaPredicted RBP9.29□□□□□ -0.92
TPM3-215ENST00000469717 IRX3P78415 501 aaPredicted RBP9.29□□□□□ -0.92
TPM3-215ENST00000469717 DPCR1Q3MIW9 517 aa9.29□□□□□ -0.92
TPM3-215ENST00000469717 BLOC1S2Q6QNY1 142 aa9.29□□□□□ -0.92
TPM3-215ENST00000469717 TMCO3Q6UWJ1 677 aa9.29□□□□□ -0.92
TPM3-215ENST00000469717 CLTCQ00610 1675 aaKnown RBP9.29□□□□□ -0.92
TPM3-215ENST00000469717 STX1AQ16623 288 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 UBXN4Q92575 508 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 CCDC8Q9H0W5 538 aaPredicted RBP9.28□□□□□ -0.92
TPM3-215ENST00000469717 EDC4Q6P2E9 1401 aaKnown RBP9.28□□□□□ -0.92
TPM3-215ENST00000469717 H3BQV1 296 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 MYO1CO00159 1063 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 IFFO2Q5TF58 517 aa9.28□□□□□ -0.92
TPM3-215ENST00000469717 USP28Q96RU2 1077 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms