RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 ATP10DQ9P241 1426 aa10.64□□□□□ -0.71
GAPVD1-213ENST00000469498 NRXN2Q9P2S2 1712 aa10.64□□□□□ -0.71
GAPVD1-213ENST00000469498 TAF1P21675 1872 aa10.64□□□□□ -0.71
GAPVD1-213ENST00000469498 TNRC6CQ9HCJ0 1690 aaKnown RBP10.63□□□□□ -0.71
GAPVD1-213ENST00000469498 CAMTA2O94983 1202 aa10.63□□□□□ -0.71
GAPVD1-213ENST00000469498 HMGB2P26583 209 aaKnown RBP10.63□□□□□ -0.71
GAPVD1-213ENST00000469498 SLC15A2Q16348 729 aa10.63□□□□□ -0.71
GAPVD1-213ENST00000469498 ITPRIPQ8IWB1 547 aa10.63□□□□□ -0.71
GAPVD1-213ENST00000469498 TMEM57Q8N5G2 664 aa10.63□□□□□ -0.71
GAPVD1-213ENST00000469498 FBXO22Q8NEZ5 403 aa10.63□□□□□ -0.71
GAPVD1-213ENST00000469498 ARHGEF1Q92888 912 aaKnown RBP10.63□□□□□ -0.71
GAPVD1-213ENST00000469498 MYD88Q99836 296 aa10.63□□□□□ -0.71
GAPVD1-213ENST00000469498 COG6Q9Y2V7 657 aa10.63□□□□□ -0.71
GAPVD1-213ENST00000469498 USP42Q9H9J4 1324 aaKnown RBP10.62□□□□□ -0.71
GAPVD1-213ENST00000469498 NEFLP07196 543 aa10.62□□□□□ -0.71
GAPVD1-213ENST00000469498 MS4A1P11836 297 aa10.62□□□□□ -0.71
GAPVD1-213ENST00000469498 RFC4P35249 363 aa10.62□□□□□ -0.71
GAPVD1-213ENST00000469498 HLFQ16534 295 aa10.62□□□□□ -0.71
GAPVD1-213ENST00000469498 TRAPPC3LQ5T215 181 aa10.62□□□□□ -0.71
GAPVD1-213ENST00000469498 USPL1Q5W0Q7 1092 aa10.62□□□□□ -0.71
GAPVD1-213ENST00000469498 CRBNQ96SW2 442 aa10.62□□□□□ -0.71
GAPVD1-213ENST00000469498 METTL22Q9BUU2 404 aaPredicted RBP10.62□□□□□ -0.71
GAPVD1-213ENST00000469498 NARFQ9UHQ1 456 aa10.62□□□□□ -0.71
GAPVD1-213ENST00000469498 COL11A2P13942 1736 aaPredicted RBP10.61□□□□□ -0.71
GAPVD1-213ENST00000469498 ATP5J2-PTCD1G3V325 749 aa10.61□□□□□ -0.71
GAPVD1-213ENST00000469498 ZPR1O75312 459 aa10.61□□□□□ -0.71
GAPVD1-213ENST00000469498 GPTP24298 496 aa10.61□□□□□ -0.71
GAPVD1-213ENST00000469498 NEXNQ0ZGT2 675 aa10.61□□□□□ -0.71
GAPVD1-213ENST00000469498 PDE3AQ14432 1141 aa10.61□□□□□ -0.71
GAPVD1-213ENST00000469498 CWF19L2Q2TBE0 894 aaKnown RBP10.61□□□□□ -0.71
GAPVD1-213ENST00000469498 GIGYF2Q6Y7W6 1299 aaKnown RBP10.61□□□□□ -0.71
GAPVD1-213ENST00000469498 COL23A1Q86Y22 540 aaPredicted RBP10.61□□□□□ -0.71
GAPVD1-213ENST00000469498 SRCIN1Q9C0H9 1055 aa10.61□□□□□ -0.71
GAPVD1-213ENST00000469498 RYDENQ9NUL5 291 aaKnown RBP10.61□□□□□ -0.71
GAPVD1-213ENST00000469498 A0A1B0GUL6 1792 aa10.6□□□□□ -0.71
GAPVD1-213ENST00000469498 DLEC1Q9Y238 1755 aa10.6□□□□□ -0.71
GAPVD1-213ENST00000469498 ERVV-1B6SEH8 477 aa10.6□□□□□ -0.71
GAPVD1-213ENST00000469498 CCT4P50991 539 aaKnown RBP10.6□□□□□ -0.71
GAPVD1-213ENST00000469498 MVPQ14764 893 aaKnown RBP10.6□□□□□ -0.71
GAPVD1-213ENST00000469498 BEND3Q5T5X7 828 aa10.6□□□□□ -0.71
GAPVD1-213ENST00000469498 INTS3Q68E01 1043 aaKnown RBP10.6□□□□□ -0.71
GAPVD1-213ENST00000469498 ZNF710Q8N1W2 664 aa10.6□□□□□ -0.71
GAPVD1-213ENST00000469498 BCL2L12Q9HB09 334 aa10.6□□□□□ -0.71
GAPVD1-213ENST00000469498 ZNF652Q9Y2D9 606 aa10.6□□□□□ -0.71
GAPVD1-213ENST00000469498 KIF13BQ9NQT8 1826 aa10.6□□□□□ -0.71
GAPVD1-213ENST00000469498 UBN2Q6ZU65 1347 aa10.59□□□□□ -0.71
GAPVD1-213ENST00000469498 NEURL1BA8MQ27 555 aa10.59□□□□□ -0.71
GAPVD1-213ENST00000469498 IGKV5-2P06315 115 aa10.59□□□□□ -0.71
GAPVD1-213ENST00000469498 TCIRG1Q13488 830 aa10.59□□□□□ -0.71
GAPVD1-213ENST00000469498 HSP90AB3PQ58FF7 597 aa10.59□□□□□ -0.71
GAPVD1-213ENST00000469498 MSL1Q68DK7 614 aa10.59□□□□□ -0.71
GAPVD1-213ENST00000469498 BICDL1Q6ZP65 573 aa10.59□□□□□ -0.71
GAPVD1-213ENST00000469498 FLAD1Q8NFF5 587 aa10.59□□□□□ -0.71
GAPVD1-213ENST00000469498 LINS1Q8NG48 757 aa10.59□□□□□ -0.71
GAPVD1-213ENST00000469498 EXOC6Q8TAG9 804 aa10.59□□□□□ -0.71
GAPVD1-213ENST00000469498 MS4A4AQ96JQ5 239 aa10.59□□□□□ -0.71
GAPVD1-213ENST00000469498 PSDA5PKW4 1024 aaPredicted RBP10.58□□□□□ -0.72
GAPVD1-213ENST00000469498 FAM177BA6PVY3 158 aa10.58□□□□□ -0.72
GAPVD1-213ENST00000469498 GYS1P13807 737 aa10.58□□□□□ -0.72
GAPVD1-213ENST00000469498 R3HDM1Q15032 1099 aaKnown RBP10.58□□□□□ -0.72
GAPVD1-213ENST00000469498 TBC1D9BQ66K14 1250 aa10.58□□□□□ -0.72
GAPVD1-213ENST00000469498 MEIS3Q99687 375 aa10.58□□□□□ -0.72
GAPVD1-213ENST00000469498 ISCA1Q9BUE6 129 aa10.58□□□□□ -0.72
GAPVD1-213ENST00000469498 PDGFDQ9GZP0 370 aaPredicted RBP10.58□□□□□ -0.72
GAPVD1-213ENST00000469498 DDX19BQ9UMR2 479 aa10.58□□□□□ -0.72
GAPVD1-213ENST00000469498 NIP7Q9Y221 180 aaKnown RBP eCLIP10.58□□□□□ -0.72
GAPVD1-213ENST00000469498 PPP1R37O75864 691 aa10.57□□□□□ -0.72
GAPVD1-213ENST00000469498 ALDH1L1O75891 902 aa10.57□□□□□ -0.72
GAPVD1-213ENST00000469498 HOXB1P14653 301 aaPredicted RBP10.57□□□□□ -0.72
GAPVD1-213ENST00000469498 PTGER2P43116 358 aa10.57□□□□□ -0.72
GAPVD1-213ENST00000469498 ZNF34Q8IZ26 560 aa10.57□□□□□ -0.72
GAPVD1-213ENST00000469498 JARID2Q92833 1246 aaPredicted RBP10.57□□□□□ -0.72
GAPVD1-213ENST00000469498 CWC25Q9NXE8 425 aaPredicted RBP10.57□□□□□ -0.72
GAPVD1-213ENST00000469498 KIAA1551Q9HCM1 1747 aa10.56□□□□□ -0.72
GAPVD1-213ENST00000469498 CARMIL3Q8ND23 1372 aa10.56□□□□□ -0.72
GAPVD1-213ENST00000469498 G3V3G9 751 aa10.56□□□□□ -0.72
GAPVD1-213ENST00000469498 GCKRQ14397 625 aa10.56□□□□□ -0.72
GAPVD1-213ENST00000469498 NFIXQ14938 502 aa10.56□□□□□ -0.72
GAPVD1-213ENST00000469498 RTL5Q5HYW3 569 aaPredicted RBP10.56□□□□□ -0.72
GAPVD1-213ENST00000469498 CLEC4GQ6UXB4 293 aa10.56□□□□□ -0.72
GAPVD1-213ENST00000469498 UBE3BQ7Z3V4 1068 aa10.56□□□□□ -0.72
GAPVD1-213ENST00000469498 NLRP10Q86W26 655 aa10.56□□□□□ -0.72
GAPVD1-213ENST00000469498 CCDC191Q8NCU4 936 aa10.56□□□□□ -0.72
GAPVD1-213ENST00000469498 C1orf115Q9H7X2 142 aa10.56□□□□□ -0.72
GAPVD1-213ENST00000469498 C9orf78Q9NZ63 289 aaPredicted RBP10.56□□□□□ -0.72
GAPVD1-213ENST00000469498 BRCA1P38398 1863 aaKnown RBP10.55□□□□□ -0.72
GAPVD1-213ENST00000469498 ABCC12Q96J65 1359 aa10.55□□□□□ -0.72
GAPVD1-213ENST00000469498 IBTKQ9P2D0 1353 aaPredicted RBP10.55□□□□□ -0.72
GAPVD1-213ENST00000469498 GRM8O00222 908 aa10.55□□□□□ -0.72
GAPVD1-213ENST00000469498 UBTFL1P0CB47 393 aaPredicted RBP10.55□□□□□ -0.72
GAPVD1-213ENST00000469498 PARP10Q53GL7 1025 aa10.55□□□□□ -0.72
GAPVD1-213ENST00000469498 SUSD4Q5VX71 490 aa10.55□□□□□ -0.72
GAPVD1-213ENST00000469498 NTSR2O95665 410 aa10.54□□□□□ -0.72
GAPVD1-213ENST00000469498 NBPF7P0C2Y1 421 aaPredicted RBP10.54□□□□□ -0.72
GAPVD1-213ENST00000469498 DDR1Q08345 913 aa10.54□□□□□ -0.72
GAPVD1-213ENST00000469498 NUTM1Q86Y26 1132 aa10.54□□□□□ -0.72
GAPVD1-213ENST00000469498 SETDB2Q96T68 719 aa10.54□□□□□ -0.72
GAPVD1-213ENST00000469498 USP44Q9H0E7 712 aa10.54□□□□□ -0.72
GAPVD1-213ENST00000469498 TRMT112Q9UI30 125 aaKnown RBP10.54□□□□□ -0.72
GAPVD1-213ENST00000469498 COL4A1P02462 1669 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms