RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 LMOD3Q0VAK6 560 aa16.04■□□□□ 0.16
HDAC3-204ENST00000469207 HSP90AB3PQ58FF7 597 aa16.04■□□□□ 0.16
HDAC3-204ENST00000469207 CYP4F22Q6NT55 531 aa16.04■□□□□ 0.16
HDAC3-204ENST00000469207 DDX46Q7L014 1031 aaKnown RBP16.04■□□□□ 0.16
HDAC3-204ENST00000469207 AIDAQ96BJ3 306 aa16.04■□□□□ 0.16
HDAC3-204ENST00000469207 RUNDC1Q96C34 613 aa16.04■□□□□ 0.16
HDAC3-204ENST00000469207 FAM89AQ96GI7 184 aa16.04■□□□□ 0.16
HDAC3-204ENST00000469207 SH3TC1Q8TE82 1336 aa16.03■□□□□ 0.16
HDAC3-204ENST00000469207 YDJCA8MPS7 323 aa16.03■□□□□ 0.16
HDAC3-204ENST00000469207 HIRAP54198 1017 aaPredicted RBP16.03■□□□□ 0.16
HDAC3-204ENST00000469207 DLK2Q6UY11 383 aa16.03■□□□□ 0.16
HDAC3-204ENST00000469207 ANKRD13DQ6ZTN6 518 aa16.03■□□□□ 0.16
HDAC3-204ENST00000469207 PAXIP1Q6ZW49 1069 aaPredicted RBP16.03■□□□□ 0.16
HDAC3-204ENST00000469207 PRDM10Q9NQV6 1147 aa16.03■□□□□ 0.16
HDAC3-204ENST00000469207 LAMB2P55268 1798 aa16.03■□□□□ 0.16
HDAC3-204ENST00000469207 MYBBP1AQ9BQG0 1328 aaKnown RBP16.02■□□□□ 0.16
HDAC3-204ENST00000469207 KIAA2012Q0VF49 1180 aa16.02■□□□□ 0.16
HDAC3-204ENST00000469207 GRAPQ13588 217 aa16.02■□□□□ 0.16
HDAC3-204ENST00000469207 HDGFL1Q5TGJ6 251 aa16.02■□□□□ 0.16
HDAC3-204ENST00000469207 CIAPIN1Q6FI81 312 aa16.02■□□□□ 0.16
HDAC3-204ENST00000469207 GRAPLQ8TC17 118 aaPredicted RBP16.02■□□□□ 0.16
HDAC3-204ENST00000469207 CELF1Q92879 486 aaKnown RBP16.02■□□□□ 0.16
HDAC3-204ENST00000469207 GLIS2Q9BZE0 524 aaPredicted RBP16.02■□□□□ 0.16
HDAC3-204ENST00000469207 ADARB2Q9NS39 739 aaKnown RBP16.02■□□□□ 0.16
HDAC3-204ENST00000469207 AOC2O75106 756 aa16.01■□□□□ 0.15
HDAC3-204ENST00000469207 HSPA8P11142 646 aaKnown RBP16.01■□□□□ 0.15
HDAC3-204ENST00000469207 SUPT20HQ8NEM7 779 aa16.01■□□□□ 0.15
HDAC3-204ENST00000469207 CAPNS2Q96L46 248 aa16.01■□□□□ 0.15
HDAC3-204ENST00000469207 ISCA1Q9BUE6 129 aa16.01■□□□□ 0.15
HDAC3-204ENST00000469207 VPS33BQ9H267 617 aa16.01■□□□□ 0.15
HDAC3-204ENST00000469207 ZBTB12Q9Y330 459 aaPredicted RBP16.01■□□□□ 0.15
HDAC3-204ENST00000469207 ELL2O00472 640 aaPredicted RBP16■□□□□ 0.15
HDAC3-204ENST00000469207 RIMBP2O15034 1052 aa16■□□□□ 0.15
HDAC3-204ENST00000469207 WDR43Q15061 677 aaKnown RBP eCLIP16■□□□□ 0.15
HDAC3-204ENST00000469207 DUSP27Q5VZP5 1158 aa16■□□□□ 0.15
HDAC3-204ENST00000469207 PLBD2Q8NHP8 589 aa16■□□□□ 0.15
HDAC3-204ENST00000469207 TRPM4Q8TD43 1214 aa16■□□□□ 0.15
HDAC3-204ENST00000469207 GPR101Q96P66 508 aaPredicted RBP16■□□□□ 0.15
HDAC3-204ENST00000469207 BCL2L13Q9BXK5 485 aa16■□□□□ 0.15
HDAC3-204ENST00000469207 KCNQ5Q9NR82 932 aa16■□□□□ 0.15
HDAC3-204ENST00000469207 COL4A1P02462 1669 aa15.99■□□□□ 0.15
HDAC3-204ENST00000469207 CELF2O95319 508 aaKnown RBP15.99■□□□□ 0.15
HDAC3-204ENST00000469207 MBIPQ9NS73 344 aa15.99■□□□□ 0.15
HDAC3-204ENST00000469207 CNOT7Q9UIV1 285 aaKnown RBP15.99■□□□□ 0.15
HDAC3-204ENST00000469207 TSKSQ9UJT2 592 aa15.99■□□□□ 0.15
HDAC3-204ENST00000469207 NSFL1CQ9UNZ2 370 aaKnown RBP15.99■□□□□ 0.15
HDAC3-204ENST00000469207 TLL2Q9Y6L7 1015 aa15.99■□□□□ 0.15
HDAC3-204ENST00000469207 ANKRD36CQ5JPF3 1778 aa15.99■□□□□ 0.15
HDAC3-204ENST00000469207 MAP2K1Q02750 393 aaPredicted RBP15.98■□□□□ 0.15
HDAC3-204ENST00000469207 JARID2Q92833 1246 aaPredicted RBP15.98■□□□□ 0.15
HDAC3-204ENST00000469207 CFAP44Q96MT7 982 aa15.98■□□□□ 0.15
HDAC3-204ENST00000469207 PHAXQ9H814 394 aaKnown RBP15.98■□□□□ 0.15
HDAC3-204ENST00000469207 ZNF408Q9H9D4 720 aa15.98■□□□□ 0.15
HDAC3-204ENST00000469207 DBNDD1Q9H9R9 158 aa15.98■□□□□ 0.15
HDAC3-204ENST00000469207 DBF4Q9UBU7 674 aaPredicted RBP15.98■□□□□ 0.15
HDAC3-204ENST00000469207 POLLQ9UGP5 575 aa15.98■□□□□ 0.15
HDAC3-204ENST00000469207 GPSM2P81274 684 aa15.97■□□□□ 0.15
HDAC3-204ENST00000469207 TNIP1Q15025 636 aa15.97■□□□□ 0.15
HDAC3-204ENST00000469207 SF3B3Q15393 1217 aaKnown RBP15.97■□□□□ 0.15
HDAC3-204ENST00000469207 DOK7Q18PE1 504 aa15.97■□□□□ 0.15
HDAC3-204ENST00000469207 SAMD7Q7Z3H4 446 aa15.97■□□□□ 0.15
HDAC3-204ENST00000469207 PGAP2Q9UHJ9 254 aa15.97■□□□□ 0.15
HDAC3-204ENST00000469207 C6orf229H3BNL8 230 aa15.96■□□□□ 0.15
HDAC3-204ENST00000469207 PSMD14O00487 310 aa15.96■□□□□ 0.15
HDAC3-204ENST00000469207 IRS4O14654 1257 aaPredicted RBP15.96■□□□□ 0.15
HDAC3-204ENST00000469207 EGFRP00533 1210 aa15.96■□□□□ 0.15
HDAC3-204ENST00000469207 WASHC4Q2M389 1173 aa15.96■□□□□ 0.15
HDAC3-204ENST00000469207 SAPCD2Q86UD0 394 aa15.96■□□□□ 0.15
HDAC3-204ENST00000469207 USP48Q86UV5 1035 aa15.96■□□□□ 0.15
HDAC3-204ENST00000469207 SEC31BQ9NQW1 1179 aa15.96■□□□□ 0.15
HDAC3-204ENST00000469207 DUOX1Q9NRD9 1551 aa15.96■□□□□ 0.14
HDAC3-204ENST00000469207 DDX60Q8IY21 1712 aaKnown RBP15.95■□□□□ 0.14
HDAC3-204ENST00000469207 APAF1O14727 1248 aa15.95■□□□□ 0.14
HDAC3-204ENST00000469207 ECE1P42892 770 aa15.95■□□□□ 0.14
HDAC3-204ENST00000469207 RBM26Q5T8P6 1007 aaKnown RBP15.95■□□□□ 0.14
HDAC3-204ENST00000469207 MICALL2Q8IY33 904 aa15.95■□□□□ 0.14
HDAC3-204ENST00000469207 HYPKQ9NX55 129 aa15.95■□□□□ 0.14
HDAC3-204ENST00000469207 HOXB7P09629 217 aa15.94■□□□□ 0.14
HDAC3-204ENST00000469207 ZNF853P0CG23 659 aa15.94■□□□□ 0.14
HDAC3-204ENST00000469207 RIC3Q7Z5B4 369 aa15.94■□□□□ 0.14
HDAC3-204ENST00000469207 CCDC85AQ96PX6 553 aaPredicted RBP15.94■□□□□ 0.14
HDAC3-204ENST00000469207 ZIC5Q96T25 663 aa15.94■□□□□ 0.14
HDAC3-204ENST00000469207 TRPM7Q96QT4 1865 aa15.94■□□□□ 0.14
HDAC3-204ENST00000469207 H7C1D1 291 aa15.93■□□□□ 0.14
HDAC3-204ENST00000469207 RPS8P62241 208 aaKnown RBP15.93■□□□□ 0.14
HDAC3-204ENST00000469207 TBC1D10BQ4KMP7 808 aaPredicted RBP15.93■□□□□ 0.14
HDAC3-204ENST00000469207 CDC37L1Q7L3B6 337 aa15.93■□□□□ 0.14
HDAC3-204ENST00000469207 C8orf58Q8NAV2 365 aa15.93■□□□□ 0.14
HDAC3-204ENST00000469207 MYD88Q99836 296 aa15.93■□□□□ 0.14
HDAC3-204ENST00000469207 PRKRIP1Q9H875 184 aaPredicted RBP15.93■□□□□ 0.14
HDAC3-204ENST00000469207 ECE2O60344 883 aa15.92■□□□□ 0.14
HDAC3-204ENST00000469207 TRIM28Q13263 835 aaKnown RBP15.92■□□□□ 0.14
HDAC3-204ENST00000469207 TMC4Q7Z404 712 aa15.92■□□□□ 0.14
HDAC3-204ENST00000469207 TBC1D16Q8TBP0 767 aa15.92■□□□□ 0.14
HDAC3-204ENST00000469207 ZC3H15Q8WU90 426 aaKnown RBP15.92■□□□□ 0.14
HDAC3-204ENST00000469207 ABHD8Q96I13 439 aa15.92■□□□□ 0.14
HDAC3-204ENST00000469207 BEGAINQ9BUH8 593 aa15.92■□□□□ 0.14
HDAC3-204ENST00000469207 RTL9Q8NET4 1388 aa15.91■□□□□ 0.14
HDAC3-204ENST00000469207 MAP2K2P36507 400 aa15.91■□□□□ 0.14
HDAC3-204ENST00000469207 ZBTB38Q8NAP3 1195 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms