RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 AACSQ86V21 672 aa16.96■□□□□ 0.31
SMARCD3-205ENST00000469154 CCDC83Q8IWF9 413 aa16.96■□□□□ 0.31
SMARCD3-205ENST00000469154 MARCH10Q8NA82 808 aaPredicted RBP16.96■□□□□ 0.31
SMARCD3-205ENST00000469154 ATRNO75882 1429 aa16.96■□□□□ 0.31
SMARCD3-205ENST00000469154 UTYO14607 1347 aa16.96■□□□□ 0.31
SMARCD3-205ENST00000469154 ZKSCAN1P17029 563 aaPredicted RBP16.96■□□□□ 0.3
SMARCD3-205ENST00000469154 ZNF790Q6PG37 636 aa16.96■□□□□ 0.3
SMARCD3-205ENST00000469154 LINS1Q8NG48 757 aa16.96■□□□□ 0.3
SMARCD3-205ENST00000469154 DDX58O95786 925 aaKnown RBP16.95■□□□□ 0.3
SMARCD3-205ENST00000469154 PDIA4P13667 645 aaKnown RBP16.95■□□□□ 0.3
SMARCD3-205ENST00000469154 CPA1P15085 419 aa16.95■□□□□ 0.3
SMARCD3-205ENST00000469154 PA2G4Q9UQ80 394 aaKnown RBP16.95■□□□□ 0.3
SMARCD3-205ENST00000469154 MRC1P22897 1456 aa16.95■□□□□ 0.3
SMARCD3-205ENST00000469154 KIAA2012Q0VF49 1180 aa16.95■□□□□ 0.3
SMARCD3-205ENST00000469154 NECTIN1Q15223 517 aa16.95■□□□□ 0.3
SMARCD3-205ENST00000469154 PROSER3Q2NL68 480 aa16.95■□□□□ 0.3
SMARCD3-205ENST00000469154 LARP6Q9BRS8 491 aaKnown RBP16.95■□□□□ 0.3
SMARCD3-205ENST00000469154 MTMR6Q9Y217 621 aa16.95■□□□□ 0.3
SMARCD3-205ENST00000469154 KAT6BQ8WYB5 2073 aa16.94■□□□□ 0.3
SMARCD3-205ENST00000469154 GLI3P10071 1580 aa16.94■□□□□ 0.3
SMARCD3-205ENST00000469154 GRM8O00222 908 aa16.94■□□□□ 0.3
SMARCD3-205ENST00000469154 FIBPO43427 364 aa16.94■□□□□ 0.3
SMARCD3-205ENST00000469154 ADCK5Q3MIX3 580 aa16.94■□□□□ 0.3
SMARCD3-205ENST00000469154 SNRKQ9NRH2 765 aa16.94■□□□□ 0.3
SMARCD3-205ENST00000469154 G3BP1Q13283 466 aaKnown RBP eCLIP16.94■□□□□ 0.3
SMARCD3-205ENST00000469154 CWF19L2Q2TBE0 894 aaKnown RBP16.94■□□□□ 0.3
SMARCD3-205ENST00000469154 SYTL4Q96C24 671 aaPredicted RBP16.94■□□□□ 0.3
SMARCD3-205ENST00000469154 TMOD3Q9NYL9 352 aa16.94■□□□□ 0.3
SMARCD3-205ENST00000469154 RBM8AQ9Y5S9 174 aaKnown RBP16.94■□□□□ 0.3
SMARCD3-205ENST00000469154 PSMA5P28066 241 aa16.93■□□□□ 0.3
SMARCD3-205ENST00000469154 CREB3L3Q68CJ9 461 aa16.93■□□□□ 0.3
SMARCD3-205ENST00000469154 TTC5Q8N0Z6 440 aa16.93■□□□□ 0.3
SMARCD3-205ENST00000469154 SUCLG2Q96I99 432 aa16.93■□□□□ 0.3
SMARCD3-205ENST00000469154 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.93■□□□□ 0.3
SMARCD3-205ENST00000469154 C5P01031 1676 aa16.93■□□□□ 0.3
SMARCD3-205ENST00000469154 PDCL3Q9H2J4 239 aa16.92■□□□□ 0.3
SMARCD3-205ENST00000469154 DDX21Q9NR30 783 aaKnown RBP eCLIP16.92■□□□□ 0.3
SMARCD3-205ENST00000469154 KCNJ4P48050 445 aa16.92■□□□□ 0.3
SMARCD3-205ENST00000469154 MAP4K1Q92918 833 aa16.92■□□□□ 0.3
SMARCD3-205ENST00000469154 NMIQ13287 307 aaPredicted RBP16.91■□□□□ 0.3
SMARCD3-205ENST00000469154 SASS6Q6UVJ0 657 aa16.91■□□□□ 0.3
SMARCD3-205ENST00000469154 PIGBQ92521 554 aa16.91■□□□□ 0.3
SMARCD3-205ENST00000469154 ZNF496Q96IT1 587 aaPredicted RBP16.91■□□□□ 0.3
SMARCD3-205ENST00000469154 TOGARAM1Q9Y4F4 1720 aa16.91■□□□□ 0.3
SMARCD3-205ENST00000469154 SASH1O94885 1247 aa16.91■□□□□ 0.3
SMARCD3-205ENST00000469154 ACSBG1Q96GR2 724 aa16.91■□□□□ 0.3
SMARCD3-205ENST00000469154 BICC1Q9H694 974 aaKnown RBP16.91■□□□□ 0.3
SMARCD3-205ENST00000469154 USP25Q9UHP3 1055 aa16.91■□□□□ 0.3
SMARCD3-205ENST00000469154 UQCRHLA0A096LP55 91 aa16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 PRAMEF22A3QJZ6 481 aa16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 UQCRHP07919 91 aa16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 HCLS1P14317 486 aaPredicted RBP16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 DNM1Q05193 864 aaKnown RBP16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 ST3GAL1Q11201 340 aa16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 ANKRD1Q15327 319 aa16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 ME3Q16798 604 aa16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 RNF20Q5VTR2 975 aa16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 ZNF772Q68DY9 489 aaPredicted RBP16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 SEPT12Q8IYM1 358 aa16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 SLC27A2O14975 620 aa16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 ONECUT3O60422 494 aaPredicted RBP16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 EAF2Q96CJ1 260 aaPredicted RBP16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 KAZALD1Q96I82 304 aa16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 FUCA2Q9BTY2 467 aa16.9■□□□□ 0.3
SMARCD3-205ENST00000469154 VPS37CA5D8V6 355 aaPredicted RBP16.89■□□□□ 0.29
SMARCD3-205ENST00000469154 ADCY5O95622 1261 aa16.89■□□□□ 0.29
SMARCD3-205ENST00000469154 FAM182BQ5T319 152 aa16.89■□□□□ 0.29
SMARCD3-205ENST00000469154 MAP7D2Q96T17 732 aa16.89■□□□□ 0.29
SMARCD3-205ENST00000469154 ALDH8A1Q9H2A2 487 aaPredicted RBP16.89■□□□□ 0.29
SMARCD3-205ENST00000469154 MED23Q9ULK4 1368 aa16.89■□□□□ 0.29
SMARCD3-205ENST00000469154 PDCP20941 246 aa16.89■□□□□ 0.29
SMARCD3-205ENST00000469154 FAM227BQ96M60 508 aa16.89■□□□□ 0.29
SMARCD3-205ENST00000469154 PTCD1O75127 700 aaKnown RBP16.88■□□□□ 0.29
SMARCD3-205ENST00000469154 FSD1Q9BTV5 496 aa16.88■□□□□ 0.29
SMARCD3-205ENST00000469154 CCDC8Q9H0W5 538 aaPredicted RBP16.88■□□□□ 0.29
SMARCD3-205ENST00000469154 ASAP1Q9ULH1 1129 aa16.88■□□□□ 0.29
SMARCD3-205ENST00000469154 TPCN1Q9ULQ1 816 aa16.88■□□□□ 0.29
SMARCD3-205ENST00000469154 AFDNP55196 1824 aaKnown RBP16.88■□□□□ 0.29
SMARCD3-205ENST00000469154 THSD7AQ9UPZ6 1657 aa16.88■□□□□ 0.29
SMARCD3-205ENST00000469154 DYNC1I1O14576 645 aa16.88■□□□□ 0.29
SMARCD3-205ENST00000469154 KDM4AO75164 1064 aa16.88■□□□□ 0.29
SMARCD3-205ENST00000469154 FMNL2Q96PY5 1086 aa16.88■□□□□ 0.29
SMARCD3-205ENST00000469154 HMG20BQ9P0W2 317 aa16.88■□□□□ 0.29
SMARCD3-205ENST00000469154 KRT85P78386 507 aa16.87■□□□□ 0.29
SMARCD3-205ENST00000469154 NEXNQ0ZGT2 675 aa16.87■□□□□ 0.29
SMARCD3-205ENST00000469154 BLOC1S2Q6QNY1 142 aa16.87■□□□□ 0.29
SMARCD3-205ENST00000469154 ELP1O95163 1332 aa16.87■□□□□ 0.29
SMARCD3-205ENST00000469154 A0A0D9SFI3 127 aa16.87■□□□□ 0.29
SMARCD3-205ENST00000469154 PDIA6Q15084 440 aa16.87■□□□□ 0.29
SMARCD3-205ENST00000469154 LARP1BQ659C4 914 aaKnown RBP16.87■□□□□ 0.29
SMARCD3-205ENST00000469154 NECAB1Q8N987 351 aa16.87■□□□□ 0.29
SMARCD3-205ENST00000469154 PIBF1Q8WXW3 757 aa16.87■□□□□ 0.29
SMARCD3-205ENST00000469154 BCL9O00512 1426 aa16.86■□□□□ 0.29
SMARCD3-205ENST00000469154 AIMP1Q12904 312 aaKnown RBP16.86■□□□□ 0.29
SMARCD3-205ENST00000469154 TPRNQ4KMQ1 711 aa16.86■□□□□ 0.29
SMARCD3-205ENST00000469154 RIC3Q7Z5B4 369 aa16.86■□□□□ 0.29
SMARCD3-205ENST00000469154 KCNQ2O43526 872 aa16.86■□□□□ 0.29
SMARCD3-205ENST00000469154 IGKV5-2P06315 115 aa16.86■□□□□ 0.29
SMARCD3-205ENST00000469154 RPS6KB1P23443 525 aa16.86■□□□□ 0.29
SMARCD3-205ENST00000469154 GIMAP6Q6P9H5 292 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms